MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP044314 Location: 2384455..2393805 Organism: Escherichia coli strain RM9245 Replicon: chromosome
Accession: NZ_CP044314 Location: 2384455..2393805 Organism: Escherichia coli strain RM9245 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7D03_RS11615 () | 2381186..2381905 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| F7D03_RS11620 () | 2381902..2383533 | - | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| F7D03_RS11625 () | 2383714..2383944 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| F7D03_RS11630 () | 2383956..2384228 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| F7D03_RS11635 () | 2384455..2384751 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| F7D03_RS11640 () | 2384779..2384952 | + | 174 | WP_001173344.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| F7D03_RS11645 () | 2385071..2386588 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| F7D03_RS11650 () | 2386825..2388282 | - | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| F7D03_RS11655 () | 2388341..2390488 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| F7D03_RS11660 () | 2390568..2391902 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| F7D03_RS11665 () | 2392267..2393805 | - | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| F7D03_RS11675 () | 2394604..2395179 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| F7D03_RS11680 () | 2395216..2396913 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| F7D03_RS11685 () | 2396889..2397227 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| F7D03_RS11690 () | 2397343..2398644 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |