MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 46899 bp
Accession: NZ_CP044147 Location: 1..46899 Organism: Escherichia coli O157 strain AR-0428 Replicon: plasmid pAR-0428-2
Accession: NZ_CP044147 Location: 1..46899 Organism: Escherichia coli O157 strain AR-0428 Replicon: plasmid pAR-0428-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V40_RS29045 () | 1..163 | + | 163 | Protein_0 | C-lysozyme inhibitor | - |
| F4V40_RS29050 () | 206..2650 | - | 2445 | WP_000973071.1 | Acyl-coenzyme A dehydrogenase | VF |
| F4V40_RS29055 () | 2890..3468 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| F4V40_RS29060 () | 3573..4340 | + | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| F4V40_RS29065 () | 4311..5051 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| F4V40_RS29070 () | 5207..5467 | - | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| F4V40_RS29075 () | 5486..5746 | - | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| F4V40_RS29080 () | 5932..6705 | + | 774 | WP_000543891.1 | Murein DD-endopeptidase MepH | VF |
| F4V40_RS29085 () | 6881..7378 | + | 498 | Protein_8 | REP-associated tyrosine transposase RayT | - |
| F4V40_RS29090 () | 7523..9235 | - | 1713 | Protein_9 | Flagellar biosynthesis protein FlhA | VF |
| F4V40_RS29095 () | 9207..9992 | + | 786 | WP_000207556.1 | Chemotaxis protein LafU | VF |
| F4V40_RS29100 () | 10063..11118 | + | 1056 | WP_001226188.1 | DNA polymerase IV | - |
| F4V40_RS29105 () | 11170..11463 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| F4V40_RS29110 () | 11466..11864 | + | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| F4V40_RS29115 () | 11874..12326 | + | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| F4V40_RS29120 () | 12645..12848 | + | 204 | Protein_15 | RNA ligase RtcB family protein | - |
| F4V40_RS29125 () | 12847..13368 | + | 522 | Protein_16 | peptide chain release factor H | - |
| F4V40_RS29130 () | 13425..14882 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| F4V40_RS29135 () | 15143..15601 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| F4V40_RS29140 () | 15693..16937 | + | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 16197..16277 | + | 81 | NuclAT_0 | - | - |
| - () | 16197..16277 | + | 81 | NuclAT_0 | - | - |
| - () | 16197..16277 | + | 81 | NuclAT_0 | - | - |
| - () | 16197..16277 | + | 81 | NuclAT_0 | - | - |
| F4V40_RS29145 () | 16995..17396 | + | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| F4V40_RS29150 () | 17435..18490 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| F4V40_RS29155 () | 18778..19881 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| F4V40_RS29160 () | 19893..21146 | + | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| F4V40_RS29170 () | 21351..22271 | - | 921 | Protein_24 | site-specific integrase | - |
| F4V40_RS29175 () | 22216..22461 | - | 246 | WP_001303805.1 | transcription antitermination protein | - |
| F4V40_RS29180 () | 22701..23090 | - | 390 | WP_000708838.1 | hypothetical protein | - |
| F4V40_RS29185 () | 23218..23931 | - | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| F4V40_RS29190 () | 24032..24232 | + | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
| F4V40_RS29195 () | 24351..24644 | + | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| F4V40_RS29200 () | 24677..25599 | + | 923 | Protein_30 | replication protein | - |
| F4V40_RS29205 () | 25596..25907 | + | 312 | WP_000788819.1 | hypothetical protein | - |
| F4V40_RS29535 () | 26222..26617 | + | 396 | WP_000844960.1 | hypothetical protein | - |
| F4V40_RS29215 () | 26638..27081 | + | 444 | WP_000344820.1 | tail assembly chaperone | - |
| F4V40_RS29220 () | 27053..27646 | - | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| F4V40_RS29225 () | 27646..28140 | - | 495 | WP_001115574.1 | hypothetical protein | - |
| F4V40_RS29230 () | 28170..28724 | + | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| F4V40_RS29235 () | 28782..29555 | - | 774 | WP_000355475.1 | hypothetical protein | - |
| F4V40_RS29240 () | 30379..31122 | + | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| F4V40_RS29245 () | 31164..31598 | - | 435 | Protein_39 | IS3 family transposase ISEc48 | Transposase |
| F4V40_RS29250 () | 32085..33266 | + | 1182 | WP_001130487.1 | tyrosine-type recombinase/integrase | - |
| F4V40_RS29255 () | 33270..33686 | + | 417 | WP_000082144.1 | hypothetical protein | - |
| F4V40_RS29260 () | 33659..34274 | + | 616 | Protein_42 | hypothetical protein | - |
| F4V40_RS29265 () | 34274..34732 | + | 459 | WP_000251694.1 | hypothetical protein | - |
| F4V40_RS29270 () | 34754..35356 | + | 603 | WP_032161214.1 | AAA family ATPase | - |
| F4V40_RS29275 () | 35387..35776 | + | 390 | WP_000647286.1 | hypothetical protein | - |
| F4V40_RS29285 () | 35976..36542 | + | 567 | WP_000350115.1 | hypothetical protein | - |
| F4V40_RS29290 () | 36950..37222 | - | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| F4V40_RS29295 () | 37228..37779 | - | 552 | WP_000968317.1 | Polarity suppression protein | - |
| F4V40_RS29300 () | 37776..38528 | - | 753 | WP_000154958.1 | septation initiation protein | - |
| F4V40_RS29305 () | 39460..39720 | + | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| F4V40_RS29310 () | 39717..40265 | + | 549 | WP_151098655.1 | host cell division inhibitor Icd-like protein | - |
| F4V40_RS29315 () | 40270..40470 | + | 201 | WP_191904696.1 | hypothetical protein | - |
| F4V40_RS29320 () | 40490..40813 | + | 324 | WP_000562750.1 | DUF5375 family protein | - |
| F4V40_RS29325 () | 40827..43141 | + | 2315 | Protein_54 | toprim domain-containing protein | - |
| F4V40_RS29330 () | 43339..44212 | - | 874 | Protein_55 | hypothetical protein | - |
| F4V40_RS29335 () | 44873..45769 | - | 897 | Protein_56 | LysR family transcriptional regulator | - |
| F4V40_RS29340 () | 45868..46589 | + | 722 | Protein_57 | putative oxidoreductase | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|