MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92722 bp
Accession: NZ_CP044146 Location: 1..92722 Organism: Escherichia coli O157 strain AR-0428 Replicon: plasmid pAR-0428-1
Accession: NZ_CP044146 Location: 1..92722 Organism: Escherichia coli O157 strain AR-0428 Replicon: plasmid pAR-0428-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V40_RS28485 () | 1365..4361 | - | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| F4V40_RS28490 () | 4363..4878 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| F4V40_RS28500 () | 5419..6590 | - | 1172 | Protein_3 | IS3 family transposase ISLad1 | Transposase |
| F4V40_RS28505 () | 6769..7170 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| F4V40_RS28510 () | 7262..8095 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| F4V40_RS28515 () | 8153..8665 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| F4V40_RS28520 () | 8652..9824 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| F4V40_RS28525 () | 9863..10840 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| F4V40_RS28530 () | 10837..11436 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| F4V40_RS28535 () | 11433..11780 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| F4V40_RS28540 () | 11795..12349 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| F4V40_RS28545 () | 12346..12780 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| F4V40_RS28550 () | 12811..14034 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| F4V40_RS28555 () | 14036..15541 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| F4V40_RS28560 () | 15541..17508 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| F4V40_RS28565 () | 17509..18384 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| F4V40_RS28570 () | 18471..21167 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| F4V40_RS28580 () | 21625..21711 | + | 87 | Protein_18 | IS3 family transposase ISEhe3 | Transposase |
| F4V40_RS28585 () | 21815..22003 | - | 189 | Protein_19 | hypothetical protein | - |
| F4V40_RS28590 () | 22056..23054 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| F4V40_RS28595 () | 23128..24849 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| F4V40_RS28600 () | 24939..26045 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| F4V40_RS28605 () | 26045..26866 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| F4V40_RS28615 () | 28307..28788 | + | 482 | Protein_24 | IS1 family transposase IS1N | Transposase |
| F4V40_RS28620 () | 29044..32946 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| F4V40_RS28630 () | 33127..34115 | - | 989 | Protein_26 | IS3 family transposase IS629 | Transposase |
| F4V40_RS28635 () | 34172..34561 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| F4V40_RS28640 () | 34605..36815 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| F4V40_RS28645 () | 36992..37177 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| F4V40_RS28650 () | 37177..37593 | + | 417 | Protein_30 | IS91 family transposase | - |
| F4V40_RS28655 () | 37593..38159 | + | 567 | Protein_31 | IS3 family transposase ISSd1 | Transposase |
| F4V40_RS28660 () | 38203..38418 | + | 216 | Protein_32 | transposase | - |
| F4V40_RS28665 () | 38518..38724 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| F4V40_RS28670 () | 38819..39094 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F4V40_RS28675 () | 39094..39378 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| F4V40_RS28690 () | 40290..41147 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| F4V40_RS28695 () | 41140..41214 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| F4V40_RS28705 () | 41450..41704 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| F4V40_RS28710 () | 41944..42282 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| F4V40_RS28715 () | 42320..42529 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| F4V40_RS28720 () | 42575..43036 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
| F4V40_RS28725 () | 43281..43493 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| F4V40_RS28730 () | 43626..44186 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| F4V40_RS28735 () | 44289..45149 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| F4V40_RS28740 () | 45208..45954 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| F4V40_RS28745 () | 45974..47362 | - | 1389 | Protein_46 | Multifunctional conjugation protein TraI | Relaxase |
| F4V40_RS28750 () | 47419..47670 | + | 252 | Protein_47 | IS3 family transposase IS1203 | Transposase |
| F4V40_RS28755 () | 47677..47847 | + | 171 | Protein_48 | IS3 family transposase IS1203 | Transposase |
| F4V40_RS28760 () | 47915..48139 | - | 225 | Protein_49 | IS3 family transposase IS3H | Transposase |
| F4V40_RS28765 () | 48213..57722 | - | 9510 | WP_000581721.1 | Toxin B | VF |
| F4V40_RS28770 () | 57829..57981 | - | 153 | Protein_51 | IS1 family transposase | - |
| F4V40_RS28775 () | 57978..58098 | - | 121 | Protein_52 | IS21 family transposase ISEc62 | Transposase |
| F4V40_RS28780 () | 58138..58401 | - | 264 | Protein_53 | IS21 family transposase ISEc62 | Transposase |
| F4V40_RS28785 () | 58495..58844 | + | 350 | Protein_54 | IS3 family transposase IS3H | Transposase |
| F4V40_RS28795 () | 59502..59933 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| F4V40_RS28800 () | 60001..62022 | - | 2022 | Protein_56 | hypothetical protein | Relaxase |
| F4V40_RS28805 () | 62156..62314 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 62379..62577 | - | 199 | NuclAT_0 | - | - |
| - () | 62379..62577 | - | 199 | NuclAT_0 | - | - |
| - () | 62379..62577 | - | 199 | NuclAT_0 | - | - |
| - () | 62379..62577 | - | 199 | NuclAT_0 | - | - |
| F4V40_RS28810 () | 62546..63307 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| F4V40_RS28815 () | 63304..63738 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| F4V40_RS28820 () | 63793..65751 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| F4V40_RS28825 () | 65817..66050 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| F4V40_RS28830 () | 66107..66559 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| F4V40_RS28835 () | 66585..66791 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| F4V40_RS28840 () | 66861..67322 | + | 462 | WP_001304227.1 | hypothetical protein | - |
| F4V40_RS28845 () | 67408..67971 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| F4V40_RS28850 () | 68018..69379 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| F4V40_RS28855 () | 69431..69661 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| F4V40_RS29520 () | 70178..70687 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| F4V40_RS28870 () | 70657..70848 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| F4V40_RS28875 () | 70845..71267 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| F4V40_RS28880 () | 71314..71616 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| F4V40_RS29525 () | 72157..72933 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| F4V40_RS28895 () | 72979..73533 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| F4V40_RS28900 () | 73427..73648 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| F4V40_RS28905 () | 73649..74332 | - | 684 | WP_000085945.1 | DNA methylase | - |
| F4V40_RS28915 () | 74409..74714 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| F4V40_RS28920 () | 74718..75620 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| F4V40_RS28925 () | 75697..77421 | - | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| F4V40_RS28950 () | 78721..79692 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| F4V40_RS28955 () | 79692..80858 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| F4V40_RS28960 () | 81446..81784 | - | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| F4V40_RS28965 () | 81746..82959 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| F4V40_RS28975 () | 83682..84488 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| F4V40_RS28980 () | 84489..84794 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| F4V40_RS28985 () | 84796..85014 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| F4V40_RS28990 () | 85473..86156 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| F4V40_RS28995 () | 86153..86773 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| F4V40_RS29000 () | 86770..86970 | + | 201 | WP_000708307.1 | hypothetical protein | - |
| F4V40_RS29010 () | 87378..88355 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| F4V40_RS29015 () | 88640..89380 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| F4V40_RS29020 () | 89501..89731 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| F4V40_RS29530 () | 89862..90354 | - | 493 | Protein_92 | Transcriptional repressor MprA | VF |
| F4V40_RS29040 () | 90475..91913 | - | 1439 | Protein_93 | Hemolysin secretion protein D, chromosomal | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|