MGE detailed information
MGE type: Genomic_island MGE length: 9350 bp
Accession: NZ_CP044145 Location: 4975035..4984384 Organism: Escherichia coli O157 strain AR-0428 Replicon: chromosome
Accession: NZ_CP044145 Location: 4975035..4984384 Organism: Escherichia coli O157 strain AR-0428 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V40_RS25825 () | 4971766..4972485 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| F4V40_RS25830 () | 4972482..4974113 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| F4V40_RS25835 () | 4974294..4974524 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| F4V40_RS25840 () | 4974536..4974808 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| F4V40_RS25845 () | 4975035..4975331 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| F4V40_RS25850 () | 4975359..4975532 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| F4V40_RS25855 () | 4975651..4977168 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| F4V40_RS25860 () | 4977405..4978861 | - | 1457 | Protein_4900 | dipeptide/tripeptide permease DtpC | - |
| F4V40_RS25865 () | 4978920..4981067 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| F4V40_RS25870 () | 4981147..4982481 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| F4V40_RS25880 () | 4982846..4984384 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| F4V40_RS25890 () | 4985183..4985758 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| F4V40_RS25895 () | 4985795..4987492 | - | 1698 | WP_000068985.1 | protein-disulfide reductase DsbD | - |
| F4V40_RS25900 () | 4987468..4987806 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| F4V40_RS25905 () | 4987922..4989223 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |