MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92690 bp
Accession: NZ_CP044144 Location: 1..92690 Organism: Escherichia coli O157 strain AR-0429 Replicon: plasmid pAR-0429-2
Accession: NZ_CP044144 Location: 1..92690 Organism: Escherichia coli O157 strain AR-0429 Replicon: plasmid pAR-0429-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V41_RS28760 () | 404..1841 | + | 1438 | Protein_1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| F4V41_RS29535 () | 1962..2454 | + | 493 | Protein_2 | Transcriptional repressor MprA | VF |
| F4V41_RS28780 () | 2585..2815 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| F4V41_RS28785 () | 2936..3676 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| F4V41_RS28790 () | 3961..4938 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| F4V41_RS28800 () | 5346..5546 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| F4V41_RS28805 () | 5543..6163 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| F4V41_RS28810 () | 6160..6843 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| F4V41_RS28815 () | 7302..7520 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| F4V41_RS28820 () | 7522..7827 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| F4V41_RS28825 () | 7828..8633 | + | 806 | Protein_11 | site-specific integrase | - |
| F4V41_RS28840 () | 10531..10869 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| F4V41_RS28845 () | 11457..12623 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| F4V41_RS28850 () | 12623..13594 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| F4V41_RS28875 () | 14894..16618 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| F4V41_RS28880 () | 16695..17597 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| F4V41_RS28885 () | 17601..17906 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| F4V41_RS28895 () | 17983..18666 | + | 684 | WP_000085945.1 | DNA methylase | - |
| F4V41_RS28900 () | 18667..18888 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| F4V41_RS28905 () | 18782..19336 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| F4V41_RS29540 () | 19382..20158 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| F4V41_RS28920 () | 20699..21001 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| F4V41_RS28925 () | 21048..21470 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| F4V41_RS28930 () | 21467..21658 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| F4V41_RS29545 () | 21628..22137 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| F4V41_RS28945 () | 22654..22884 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| F4V41_RS28950 () | 22936..24297 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| F4V41_RS28955 () | 24343..24906 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| F4V41_RS28960 () | 24992..25447 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| F4V41_RS28965 () | 25517..25723 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| F4V41_RS28970 () | 25749..26201 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| F4V41_RS28975 () | 26258..26491 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| F4V41_RS28980 () | 26557..28515 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| F4V41_RS28985 () | 28570..29004 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| F4V41_RS28990 () | 29001..29762 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 29731..29929 | + | 199 | NuclAT_0 | - | - |
| - () | 29731..29929 | + | 199 | NuclAT_0 | - | - |
| - () | 29731..29929 | + | 199 | NuclAT_0 | - | - |
| - () | 29731..29929 | + | 199 | NuclAT_0 | - | - |
| F4V41_RS28995 () | 29994..30152 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| F4V41_RS29000 () | 30286..32306 | + | 2021 | Protein_38 | relaxase NikB | - |
| F4V41_RS29005 () | 32374..32805 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| F4V41_RS29015 () | 33449..33798 | - | 350 | Protein_40 | IS3 family transposase IS3H | Transposase |
| F4V41_RS29020 () | 33892..34155 | + | 264 | Protein_41 | IS21 family transposase ISEc62 | Transposase |
| F4V41_RS29025 () | 34195..34315 | + | 121 | Protein_42 | IS21 family transposase ISEc62 | Transposase |
| F4V41_RS29030 () | 34312..34464 | + | 153 | Protein_43 | IS1 family transposase | - |
| F4V41_RS29035 () | 34571..44072 | + | 9502 | Protein_44 | toxin B | - |
| F4V41_RS29040 () | 44146..44370 | + | 225 | Protein_45 | IS3 family transposase IS3H | Transposase |
| F4V41_RS29045 () | 44438..44608 | - | 171 | Protein_46 | IS3 family transposase IS1203 | Transposase |
| F4V41_RS29050 () | 44615..44866 | - | 252 | Protein_47 | IS3 family transposase IS1203 | Transposase |
| F4V41_RS29055 () | 44923..46311 | + | 1389 | Protein_48 | Multifunctional conjugation protein TraI | Relaxase |
| F4V41_RS29060 () | 46331..47077 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| F4V41_RS29065 () | 47136..47996 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| F4V41_RS29070 () | 48099..48659 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| F4V41_RS29075 () | 48792..49004 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| F4V41_RS29080 () | 49249..49710 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| F4V41_RS29085 () | 49756..49965 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| F4V41_RS29090 () | 50003..50341 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| F4V41_RS29095 () | 50581..50835 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| F4V41_RS29105 () | 51071..51145 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| F4V41_RS29110 () | 51138..51995 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| F4V41_RS29125 () | 52907..53191 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| F4V41_RS29130 () | 53191..53466 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F4V41_RS29135 () | 53561..53767 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| F4V41_RS29140 () | 53867..54082 | - | 216 | Protein_62 | transposase | - |
| F4V41_RS29145 () | 54126..54692 | - | 567 | Protein_63 | IS3 family transposase ISSd1 | Transposase |
| F4V41_RS29150 () | 54692..55108 | - | 417 | Protein_64 | IS91 family transposase | - |
| F4V41_RS29155 () | 55108..55293 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| F4V41_RS29160 () | 55454..57679 | + | 2226 | WP_032161295.1 | Catalase-peroxidase | VF |
| F4V41_RS29165 () | 57723..58112 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| F4V41_RS29170 () | 58169..59157 | + | 989 | Protein_68 | IS3 family transposase IS629 | Transposase |
| F4V41_RS29180 () | 59338..63240 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| F4V41_RS29185 () | 63496..63977 | - | 482 | Protein_70 | IS1 family transposase IS1N | Transposase |
| F4V41_RS29195 () | 65419..66240 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| F4V41_RS29200 () | 66240..67346 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| F4V41_RS29205 () | 67436..69157 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| F4V41_RS29210 () | 69231..70229 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| F4V41_RS29215 () | 70282..70470 | + | 189 | Protein_75 | hypothetical protein | - |
| F4V41_RS29220 () | 70574..70660 | - | 87 | Protein_76 | IS3 family transposase ISEhe3 | Transposase |
| F4V41_RS29230 () | 71124..73820 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| F4V41_RS29235 () | 73907..74781 | + | 875 | Protein_78 | Type II secretion system protein C | VF |
| F4V41_RS29240 () | 74782..76749 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| F4V41_RS29245 () | 76749..78254 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| F4V41_RS29250 () | 78256..79479 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| F4V41_RS29255 () | 79510..79943 | + | 434 | Protein_82 | Type II secretion system protein G | VF |
| F4V41_RS29260 () | 79940..80458 | + | 519 | Protein_83 | type II secretion system minor pseudopilin GspH | - |
| F4V41_RS29265 () | 80508..80855 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| F4V41_RS29270 () | 80852..81450 | + | 599 | Protein_85 | Type II secretion system protein J | VF |
| F4V41_RS29275 () | 81447..82424 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| F4V41_RS29280 () | 82463..83635 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| F4V41_RS29285 () | 83622..84134 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| F4V41_RS29290 () | 84192..85025 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| F4V41_RS29295 () | 85117..85518 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| F4V41_RS29300 () | 85697..86868 | + | 1172 | Protein_91 | IS3 family transposase ISLad1 | Transposase |
| F4V41_RS29310 () | 87409..87923 | + | 515 | Protein_92 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| F4V41_RS29315 () | 87925..90921 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|