MGE detailed information
MGE type: Prophage MGE length: 111047 bp
Accession: NZ_CP044143 Location: 4978470..5089516 Organism: Escherichia coli O157 strain AR-0429 Replicon: chromosome
Accession: NZ_CP044143 Location: 4978470..5089516 Organism: Escherichia coli O157 strain AR-0429 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V41_RS25835 () | 4974370..4975590 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| F4V41_RS25840 () | 4975715..4976410 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| F4V41_RS25845 () | 4976363..4977655 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| F4V41_RS25850 () | 4977813..4978427 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| F4V41_RS25855 () | 4978470..4979324 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| F4V41_RS25860 () | 4979326..4979943 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| F4V41_RS25865 () | 4979954..4982377 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| F4V41_RS25870 () | 4982438..4984864 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| F4V41_RS25875 () | 4985063..4985368 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| F4V41_RS25880 () | 4985476..4986186 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| F4V41_RS25885 () | 4986189..4986749 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| F4V41_RS25890 () | 4986784..4987125 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| F4V41_RS25895 () | 4987260..4987586 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| F4V41_RS25905 () | 4987858..4988540 | - | 683 | Protein_4734 | DUF3596 domain-containing protein | - |
| F4V41_RS25910 () | 4988575..4988826 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| F4V41_RS25915 () | 4988899..4991370 | - | 2472 | WP_000048458.1 | exonuclease | - |
| F4V41_RS25920 () | 4991463..4991654 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| F4V41_RS25925 () | 4991651..4991839 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| F4V41_RS25935 () | 4992408..4992626 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| F4V41_RS25940 () | 4992698..4992997 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| F4V41_RS25945 () | 4993350..4993628 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F4V41_RS25950 () | 4993630..4993821 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| F4V41_RS25955 () | 4993842..4994213 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| F4V41_RS25960 () | 4994311..4994613 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| F4V41_RS25965 () | 4994610..4995035 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| F4V41_RS25970 () | 4995058..4996020 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| F4V41_RS25975 () | 4996027..4996767 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| F4V41_RS25980 () | 4996793..4997562 | + | 770 | Protein_4748 | DUF1627 domain-containing protein | - |
| F4V41_RS25985 () | 4997578..4997973 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| F4V41_RS25990 () | 4998030..4998614 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| F4V41_RS25995 () | 4998730..4998834 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| F4V41_RS26000 () | 4999080..4999235 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| F4V41_RS26005 () | 4999403..4999681 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| F4V41_RS26010 () | 4999683..5000732 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| F4V41_RS26015 () | 5000745..5001104 | + | 360 | WP_151121037.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F4V41_RS26020 () | 5001101..5001790 | + | 690 | WP_001059381.1 | antiterminator | - |
| F4V41_RS26045 () | 5002430..5002858 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| F4V41_RS26050 () | 5002855..5003110 | + | 256 | Protein_4758 | DUF3927 family protein | - |
| F4V41_RS26055 () | 5003336..5005186 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| F4V41_RS26060 () | 5005626..5005841 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| F4V41_RS26065 () | 5005846..5006190 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| F4V41_RS26070 () | 5006241..5006774 | + | 534 | WP_000992137.1 | lysozyme | - |
| F4V41_RS26075 () | 5007045..5007614 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| F4V41_RS26080 () | 5007614..5007760 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| F4V41_RS26090 () | 5007988..5008173 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| F4V41_RS26095 () | 5008598..5008825 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| F4V41_RS26100 () | 5008867..5009232 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| F4V41_RS26110 () | 5009522..5010085 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| F4V41_RS26115 () | 5010082..5011743 | + | 1662 | WP_038425863.1 | terminase large subunit | - |
| F4V41_RS26120 () | 5011807..5013744 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| F4V41_RS26125 () | 5013789..5014010 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| F4V41_RS26130 () | 5013956..5016535 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| F4V41_RS26135 () | 5016538..5016864 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| F4V41_RS26140 () | 5016874..5017224 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| F4V41_RS26145 () | 5017221..5017667 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| F4V41_RS26150 () | 5017664..5018008 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| F4V41_RS26155 () | 5018074..5018790 | + | 717 | WP_060722693.1 | phage tail protein | - |
| F4V41_RS26160 () | 5018796..5019170 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| F4V41_RS26165 () | 5019266..5019475 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| F4V41_RS26170 () | 5019528..5022608 | + | 3081 | WP_000212897.1 | phage tail tape measure protein | - |
| F4V41_RS26175 () | 5022601..5022942 | + | 342 | WP_000807954.1 | phage tail protein | - |
| F4V41_RS26180 () | 5022942..5023379 | + | 438 | WP_001152128.1 | phage minor tail protein L | - |
| F4V41_RS26185 () | 5023567..5027045 | + | 3479 | Protein_4783 | host specificity protein J | - |
| F4V41_RS26195 () | 5027113..5027712 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| F4V41_RS26200 () | 5027777..5029001 | + | 1225 | Protein_4785 | prophage tail fiber N-terminal domain-containing protein | - |
| F4V41_RS26205 () | 5029003..5029272 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| F4V41_RS26210 () | 5029386..5029961 | + | 576 | Protein_4787 | hypothetical protein | VF |
| F4V41_RS26220 () | 5030671..5031321 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| F4V41_RS26225 () | 5031471..5031866 | + | 396 | Protein_4789 | IS256 family transposase ISEic2 | Transposase |
| F4V41_RS26230 () | 5031904..5033442 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| F4V41_RS26235 () | 5033492..5033839 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| F4V41_RS26240 () | 5033836..5034216 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| F4V41_RS26245 () | 5034311..5035129 | + | 819 | Protein_4793 | IS256 family transposase IS1414 | Transposase |
| F4V41_RS26250 () | 5035179..5035421 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| F4V41_RS26255 () | 5035599..5036150 | - | 552 | Protein_4795 | Putative defective protein IntQ ; Integrase | Integrase |
| F4V41_RS26260 () | 5036138..5037376 | - | 1239 | Protein_4796 | exonuclease | - |
| F4V41_RS26265 () | 5037469..5037657 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| F4V41_RS26270 () | 5037654..5037842 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| F4V41_RS26280 () | 5038407..5038616 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| F4V41_RS26285 () | 5038617..5039255 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| F4V41_RS26290 () | 5039267..5039419 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| F4V41_RS26295 () | 5039712..5040050 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| F4V41_RS26300 () | 5040442..5040684 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| F4V41_RS26305 () | 5040668..5041093 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| F4V41_RS26310 () | 5041162..5042205 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| F4V41_RS26315 () | 5042198..5042659 | + | 462 | WP_000139447.1 | replication protein | - |
| F4V41_RS26320 () | 5042693..5043409 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| F4V41_RS26325 () | 5043442..5043723 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| F4V41_RS26330 () | 5043720..5043947 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| F4V41_RS26335 () | 5043940..5044251 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| F4V41_RS26340 () | 5044379..5044597 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| F4V41_RS26345 () | 5044599..5045156 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| F4V41_RS26350 () | 5045447..5045602 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| F4V41_RS26355 () | 5045722..5046066 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| F4V41_RS26360 () | 5046188..5046460 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| F4V41_RS26365 () | 5046462..5047511 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| F4V41_RS26370 () | 5047524..5047829 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F4V41_RS26375 () | 5047892..5048446 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| F4V41_RS26380 () | 5048671..5048868 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| F4V41_RS26385 () | 5049004..5049717 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| F4V41_RS26400 () | 5050172..5050600 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| F4V41_RS26405 () | 5050597..5050852 | + | 256 | Protein_4822 | DUF3927 family protein | - |
| F4V41_RS26410 () | 5051078..5052928 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| F4V41_RS26415 () | 5053367..5053582 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| F4V41_RS26420 () | 5053587..5053931 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| F4V41_RS26425 () | 5053982..5054515 | + | 534 | WP_000992137.1 | lysozyme | - |
| F4V41_RS26430 () | 5054787..5055356 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| F4V41_RS26435 () | 5055356..5055502 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| F4V41_RS26440 () | 5055725..5055910 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| F4V41_RS26445 () | 5056436..5056750 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| F4V41_RS26450 () | 5056832..5057056 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| F4V41_RS26460 () | 5057443..5057988 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| F4V41_RS26465 () | 5057963..5059888 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| F4V41_RS26470 () | 5059885..5060091 | + | 207 | WP_000198153.1 | gpW family protein | - |
| F4V41_RS26475 () | 5060088..5061689 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| F4V41_RS26480 () | 5061670..5062989 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| F4V41_RS26485 () | 5062999..5063331 | + | 333 | WP_001295978.1 | head decoration protein | - |
| F4V41_RS26490 () | 5063387..5064412 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| F4V41_RS26495 () | 5064454..5064852 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| F4V41_RS26500 () | 5064864..5065217 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| F4V41_RS26505 () | 5065232..5065765 | + | 534 | WP_000975020.1 | phage tail protein | - |
| F4V41_RS26510 () | 5065762..5066157 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| F4V41_RS26515 () | 5066165..5066917 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| F4V41_RS26520 () | 5066931..5067353 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| F4V41_RS26525 () | 5067380..5067793 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| F4V41_RS26530 () | 5067774..5070386 | + | 2613 | WP_032166593.1 | phage tail tape measure protein | - |
| F4V41_RS26535 () | 5070383..5070712 | + | 330 | WP_000847298.1 | phage tail protein | - |
| F4V41_RS26540 () | 5070712..5071410 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| F4V41_RS26545 () | 5071421..5072164 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| F4V41_RS26550 () | 5072110..5072739 | + | 630 | WP_072147834.1 | tail assembly protein | - |
| F4V41_RS26555 () | 5072980..5076459 | + | 3480 | WP_151121038.1 | host specificity protein J | - |
| F4V41_RS26560 () | 5076527..5077126 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| F4V41_RS26565 () | 5077191..5078413 | + | 1223 | Protein_4853 | hypothetical protein | VF |
| F4V41_RS26570 () | 5078415..5078684 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| F4V41_RS26575 () | 5078798..5079373 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| F4V41_RS26580 () | 5079446..5080075 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| F4V41_RS26585 () | 5080157..5080798 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| F4V41_RS26595 () | 5080960..5081202 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| F4V41_RS26600 () | 5081334..5082617 | + | 1284 | Protein_4859 | MHS family MFS transporter YdfJ | - |
| F4V41_RS26605 () | 5082706..5084166 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| F4V41_RS26610 () | 5084202..5084405 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| F4V41_RS26615 () | 5084582..5085268 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| F4V41_RS26620 () | 5085357..5086103 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| F4V41_RS26625 () | 5086240..5088285 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| F4V41_RS26630 () | 5088330..5088848 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| F4V41_RS26635 () | 5089124..5089516 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| F4V41_RS26640 () | 5089771..5090661 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| F4V41_RS29670 () | 5090776..5090880 | - | 105 | WP_211180496.1 | protein MgtT | - |
| F4V41_RS26645 () | 5090880..5090975 | - | 96 | WP_000901365.1 | protein MgtS | - |
| F4V41_RS26650 () | 5091083..5092054 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| F4V41_RS26655 () | 5092149..5092544 | + | 396 | WP_001271101.1 | rhodanese | - |
| F4V41_RS26660 () | 5092585..5093772 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.007 |