MGE detailed information
MGE type: Prophage MGE length: 49607 bp
Accession: NZ_CP043950 Location: 2322755..2372361 Organism: Escherichia coli strain ST95-32 Replicon: chromosome
Accession: NZ_CP043950 Location: 2322755..2372361 Organism: Escherichia coli strain ST95-32 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3J96_RS11515 () | 2317950..2318954 | + | 1005 | WP_000994894.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF | - |
| F3J96_RS11520 () | 2319007..2319336 | - | 330 | WP_000366957.1 | HI1450 family dsDNA-mimic protein | - |
| F3J96_RS11525 () | 2319371..2320831 | - | 1461 | WP_000214516.1 | cardiolipin synthase | - |
| F3J96_RS11530 () | 2320974..2321147 | + | 174 | WP_001309467.1 | YciY family protein | - |
| F3J96_RS11535 () | 2321202..2322455 | - | 1254 | WP_001313775.1 | voltage-gated potassium channel protein | - |
| F3J96_RS11540 () | 2322755..2323051 | - | 297 | WP_000967595.1 | YciI family protein | - |
| F3J96_RS11545 () | 2323275..2323991 | + | 717 | WP_001357407.1 | TonB system transport protein TonB | - |
| F3J96_RS11550 () | 2324031..2324429 | - | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| F3J96_RS11555 () | 2324535..2325074 | - | 540 | WP_000808672.1 | septation protein A | - |
| F3J96_RS11560 () | 2325104..2325847 | - | 744 | WP_150330633.1 | envelope biogenesis factor ElyC | - |
| F3J96_RS11565 () | 2325875..2325964 | - | 90 | Protein_2206 | YkgJ family cysteine cluster protein | - |
| F3J96_RS11570 () | 2326203..2326841 | + | 639 | WP_001350853.1 | outer membrane protein OmpW | - |
| F3J96_RS11575 () | 2326887..2328017 | - | 1131 | WP_000113674.1 | hypothetical protein ; Integrase | Integrase |
| F3J96_RS11580 () | 2327995..2328243 | - | 249 | WP_000113189.1 | excisionase | - |
| F3J96_RS11585 () | 2328308..2330779 | - | 2472 | WP_150330634.1 | exonuclease | - |
| F3J96_RS11590 () | 2330872..2331063 | - | 192 | WP_001090203.1 | DUF1482 family protein | - |
| F3J96_RS11595 () | 2331060..2331248 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| F3J96_RS11605 () | 2331814..2332035 | - | 222 | WP_001171970.1 | hypothetical protein | - |
| F3J96_RS11610 () | 2332195..2332350 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| F3J96_RS11615 () | 2332643..2332981 | - | 339 | WP_001362937.1 | peptidase S24 | - |
| F3J96_RS11620 () | 2333373..2333615 | + | 243 | WP_000747951.1 | hypothetical protein | - |
| F3J96_RS11625 () | 2333599..2334024 | + | 426 | WP_000693867.1 | Rha family transcriptional regulator | - |
| F3J96_RS11630 () | 2334096..2335166 | + | 1071 | WP_001262357.1 | hypothetical protein | - |
| F3J96_RS11635 () | 2335207..2335629 | + | 423 | WP_001151216.1 | DUF977 family protein | - |
| F3J96_RS11640 () | 2335821..2336783 | + | 963 | WP_014639476.1 | hypothetical protein | - |
| F3J96_RS11645 () | 2336799..2337800 | + | 1002 | WP_000354966.1 | hypothetical protein | - |
| F3J96_RS11660 () | 2338418..2338573 | + | 156 | WP_000813256.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| F3J96_RS11665 () | 2338741..2339019 | + | 279 | WP_011478175.1 | hypothetical protein | - |
| F3J96_RS11670 () | 2339021..2340067 | + | 1047 | WP_001265108.1 | DUF968 domain-containing protein | - |
| F3J96_RS11675 () | 2340080..2340454 | + | 375 | WP_000904114.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F3J96_RS11680 () | 2340451..2341272 | + | 822 | WP_000762880.1 | antitermination protein | - |
| F3J96_RS11685 () | 2341497..2341694 | + | 198 | WP_000917749.1 | hypothetical protein | - |
| F3J96_RS11690 () | 2341845..2342894 | + | 1050 | WP_000935515.1 | site-specific DNA-methyltransferase | - |
| F3J96_RS11715 () | 2344169..2344396 | + | 228 | WP_001331709.1 | DUF1737 domain-containing protein | - |
| F3J96_RS11720 () | 2344665..2344880 | + | 216 | WP_000372595.1 | class II holin family protein | - |
| F3J96_RS11725 () | 2344885..2345229 | + | 345 | WP_000193259.1 | YdfR family protein | - |
| F3J96_RS11730 () | 2345195..2345467 | - | 273 | WP_001351274.1 | hypothetical protein | - |
| F3J96_RS11735 () | 2345573..2346106 | + | 534 | WP_000992052.1 | lysozyme | - |
| F3J96_RS27785 () | 2346266..2346403 | + | 138 | WP_000459345.1 | hypothetical protein | - |
| F3J96_RS11740 () | 2346405..2346869 | + | 465 | WP_001082537.1 | lysis protein | - |
| F3J96_RS11745 () | 2347177..2347587 | - | 411 | WP_000057035.1 | DUF1398 family protein | - |
| F3J96_RS11750 () | 2347645..2347878 | - | 234 | WP_001331705.1 | YlcI/YnfO family protein | - |
| F3J96_RS11755 () | 2348264..2348812 | + | 549 | WP_000867575.1 | terminase small subunit | - |
| F3J96_RS11760 () | 2348784..2350712 | + | 1929 | WP_021527900.1 | phage terminase large subunit family protein | - |
| F3J96_RS11765 () | 2350696..2350902 | + | 207 | WP_000259002.1 | head-tail joining protein | - |
| F3J96_RS11770 () | 2350899..2352491 | + | 1593 | WP_000831818.1 | phage portal protein | - |
| F3J96_RS11775 () | 2352481..2353986 | + | 1506 | WP_150330635.1 | S49 family peptidase | - |
| F3J96_RS11780 () | 2354023..2354370 | + | 348 | WP_000256823.1 | head decoration protein | - |
| F3J96_RS11785 () | 2354428..2355456 | + | 1029 | WP_000522591.1 | major capsid protein | - |
| F3J96_RS11790 () | 2355508..2355891 | + | 384 | WP_000201495.1 | hypothetical protein | - |
| F3J96_RS11795 () | 2355884..2356237 | + | 354 | WP_001204554.1 | tail attachment protein | - |
| F3J96_RS11800 () | 2356253..2356786 | + | 534 | WP_000974980.1 | phage tail protein | - |
| F3J96_RS11805 () | 2356783..2357178 | + | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| F3J96_RS11810 () | 2357186..2357938 | + | 753 | WP_000235110.1 | phage tail protein | - |
| F3J96_RS11815 () | 2357952..2358383 | + | 432 | WP_000479095.1 | phage minor tail protein G | - |
| F3J96_RS11820 () | 2358410..2358823 | + | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| F3J96_RS11825 () | 2358804..2361377 | + | 2574 | WP_001596712.1 | phage tail tape measure protein | - |
| F3J96_RS11830 () | 2361374..2361703 | + | 330 | WP_000847402.1 | phage tail protein | - |
| F3J96_RS11835 () | 2361703..2362401 | + | 699 | WP_001152522.1 | phage minor tail protein L | - |
| F3J96_RS11840 () | 2362406..2363149 | + | 744 | WP_000140762.1 | C40 family peptidase | - |
| F3J96_RS11845 () | 2363086..2363688 | + | 603 | WP_000090879.1 | tail assembly protein | - |
| F3J96_RS27790 () | 2363762..2364100 | + | 339 | WP_001332187.1 | hypothetical protein | - |
| F3J96_RS11855 () | 2364167..2364499 | + | 333 | Protein_2258 | host specificity protein J | - |
| F3J96_RS11860 () | 2364655..2364876 | - | 222 | WP_000560231.1 | cell division protein FtsZ | - |
| F3J96_RS11865 () | 2364922..2365770 | - | 849 | WP_000935606.1 | Rha family phage regulatory protein | - |
| F3J96_RS11875 () | 2366338..2366559 | + | 222 | WP_000202161.1 | hypothetical protein | - |
| F3J96_RS11880 () | 2366549..2366923 | - | 375 | WP_001553098.1 | hypothetical protein | - |
| F3J96_RS11885 () | 2366935..2367087 | - | 153 | WP_000379609.1 | DUF1391 family protein | - |
| F3J96_RS11890 () | 2367359..2367646 | - | 288 | WP_000936799.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F3J96_RS11895 () | 2367646..2367837 | - | 192 | WP_000100899.1 | hypothetical protein | Antitoxin Detail |
| F3J96_RS11900 () | 2367865..2368266 | - | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| F3J96_RS11905 () | 2368376..2368648 | + | 273 | WP_000887447.1 | helix-turn-helix domain-containing protein | - |
| F3J96_RS11910 () | 2368632..2368910 | + | 279 | Protein_2268 | toxin YdaT domain-containing protein | - |
| F3J96_RS27795 () | 2368919..2369164 | + | 246 | Protein_2269 | hypothetical protein | - |
| F3J96_RS27800 () | 2369313..2369510 | + | 198 | Protein_2270 | host specificity protein J | - |
| F3J96_RS11925 () | 2370200..2371215 | + | 1016 | Protein_2271 | DUF1983 domain-containing protein | - |
| F3J96_RS11930 () | 2371218..2371817 | + | 600 | WP_001233195.1 | Outer membrane protein X | VF |
| F3J96_RS11935 () | 2371969..2372247 | + | 279 | Protein_2273 | prophage tail fiber N-terminal domain-containing protein | - |
| F3J96_RS11945 () | 2372401..2373723 | - | 1323 | WP_001125475.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | - |
| F3J96_RS11950 () | 2373723..2373989 | - | 267 | WP_001332145.1 | type II toxin-antitoxin system antitoxin HipB | - |
| F3J96_RS11955 () | 2374297..2375055 | + | 759 | WP_001286588.1 | trans-aconitate 2-methyltransferase | - |
| F3J96_RS11960 () | 2375059..2375973 | - | 915 | WP_001306069.1 | bestrophin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|