MGE detailed information
MGE type: Prophage MGE length: 71484 bp
Accession: NZ_CP043542 Location: 3912242..3983725 Organism: Escherichia coli strain F2_81 Replicon: chromosome
Accession: NZ_CP043542 Location: 3912242..3983725 Organism: Escherichia coli strain F2_81 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPH39_RS18900 (3908067) | 3908067..3909125 | - | 1059 | WP_122986182.1 | alpha/beta hydrolase | - |
| CPH39_RS18905 (3909390) | 3909390..3910274 | + | 885 | WP_001119037.1 | LysR family transcriptional regulator | - |
| CPH39_RS18910 (3910977) | 3910977..3911255 | - | 279 | WP_024227134.1 | hypothetical protein | - |
| CPH39_RS18915 (3911421) | 3911421..3912143 | - | 723 | WP_053884074.1 | SDR family oxidoreductase | - |
| CPH39_RS18920 (3912242) | 3912242..3913141 | + | 900 | WP_053884073.1 | HTH-type transcriptional regulator ArgP | VF |
| CPH39_RS18925 (3913546) | 3913546..3914466 | - | 921 | WP_053884070.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| CPH39_RS18930 (3914453) | 3914453..3915235 | - | 783 | WP_064763319.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| CPH39_RS18935 (3915551) | 3915551..3918760 | + | 3210 | WP_053884066.1 | RNA-directed DNA polymerase | - |
| CPH39_RS18940 (3918967) | 3918967..3919125 | + | 159 | WP_096220653.1 | ash family protein | - |
| CPH39_RS18950 (3920521) | 3920521..3920886 | + | 366 | Protein_3733 | hypothetical protein | - |
| CPH39_RS18955 (3921031) | 3921031..3921222 | + | 192 | Protein_3734 | integrase | - |
| CPH39_RS18960 (3922957) | 3922957..3924171 | + | 1215 | WP_012602456.1 | type II restriction endonuclease | - |
| CPH39_RS18965 (3924206) | 3924206..3925639 | - | 1434 | WP_001288444.1 | DNA cytosine methyltransferase | - |
| CPH39_RS18970 (3926046) | 3926046..3926819 | + | 774 | WP_000355482.1 | hypothetical protein | - |
| CPH39_RS18975 (3926889) | 3926889..3927473 | - | 585 | WP_220541890.1 | tail fiber assembly protein | - |
| CPH39_RS18980 (3927473) | 3927473..3930874 | - | 3402 | WP_220541891.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CPH39_RS18985 (3930939) | 3930939..3931538 | - | 600 | WP_052982958.1 | hypothetical protein | VF |
| CPH39_RS18990 (3931608) | 3931608..3935105 | - | 3498 | WP_220541892.1 | host specificity protein J | - |
| CPH39_RS18995 (3935166) | 3935166..3935768 | - | 603 | WP_052920620.1 | tail assembly protein | - |
| CPH39_RS19000 (3935705) | 3935705..3936448 | - | 744 | WP_072114202.1 | C40 family peptidase | - |
| CPH39_RS19005 (3936453) | 3936453..3937151 | - | 699 | WP_001152403.1 | phage minor tail protein L | - |
| CPH39_RS19010 (3937161) | 3937161..3937490 | - | 330 | WP_000447248.1 | phage tail protein | - |
| CPH39_RS19015 (3937490) | 3937490..3940555 | - | 3066 | WP_000372000.1 | phage tail tape measure protein | - |
| CPH39_RS19020 (3940527) | 3940527..3940856 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| CPH39_RS19025 (3940865) | 3940865..3941251 | - | 387 | WP_001300035.1 | phage minor tail protein G | - |
| CPH39_RS19030 (3941312) | 3941312..3942055 | - | 744 | WP_000211088.1 | phage tail protein | - |
| CPH39_RS19035 (3942067) | 3942067..3942468 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| CPH39_RS19040 (3942465) | 3942465..3943043 | - | 579 | WP_000677106.1 | phage tail protein | - |
| CPH39_RS19045 (3943055) | 3943055..3943330 | - | 276 | WP_001283147.1 | DNA breaking-rejoining protein | - |
| CPH39_RS19050 (3943323) | 3943323..3943646 | - | 324 | WP_001097046.1 | DUF2190 family protein | - |
| CPH39_RS19055 (3943733) | 3943733..3945760 | - | 2028 | WP_001136590.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CPH39_RS19060 (3945705) | 3945705..3947285 | - | 1581 | WP_074389534.1 | phage portal protein | - |
| CPH39_RS19065 (3947213) | 3947213..3947425 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| CPH39_RS19070 (3947422) | 3947422..3949530 | - | 2109 | WP_000934128.1 | phage terminase large subunit family protein | - |
| CPH39_RS19075 (3949530) | 3949530..3950024 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| CPH39_RS19080 (3950382) | 3950382..3950558 | + | 177 | WP_001205135.1 | hypothetical protein | - |
| CPH39_RS19085 (3950700) | 3950700..3950852 | - | 153 | WP_001139681.1 | hypothetical protein | - |
| CPH39_RS19090 (3950840) | 3950840..3951307 | - | 468 | WP_029700804.1 | lysis protein | - |
| CPH39_RS19095 (3951304) | 3951304..3951801 | - | 498 | WP_001135250.1 | lysozyme RrrD | - |
| CPH39_RS19100 (3951801) | 3951801..3952016 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| CPH39_RS19105 (3952084) | 3952084..3953136 | - | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| CPH39_RS19110 (3953287) | 3953287..3953574 | - | 288 | WP_223675311.1 | hypothetical protein | - |
| CPH39_RS19115 (3953755) | 3953755..3954681 | + | 927 | WP_061349325.1 | hypothetical protein | - |
| CPH39_RS19120 (3954668) | 3954668..3955216 | + | 549 | WP_001531322.1 | hypothetical protein | - |
| CPH39_RS19125 (3955229) | 3955229..3955570 | - | 342 | WP_096220609.1 | antiterminator Q family protein | - |
| CPH39_RS19130 (3955588) | 3955588..3956577 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| CPH39_RS19135 (3956585) | 3956585..3957382 | - | 798 | WP_001061404.1 | KilA-N domain-containing protein | - |
| CPH39_RS19140 (3957402) | 3957402..3957791 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CPH39_RS19145 (3957788) | 3957788..3958114 | - | 327 | WP_032330051.1 | LexA family transcriptional regulator | - |
| CPH39_RS19150 (3958114) | 3958114..3958608 | - | 495 | WP_072178398.1 | PerC family transcriptional regulator | - |
| CPH39_RS19155 (3958605) | 3958605..3959546 | - | 942 | WP_042028809.1 | helix-turn-helix domain-containing protein | - |
| CPH39_RS19160 (3959536) | 3959536..3959715 | - | 180 | WP_001250272.1 | DUF4222 domain-containing protein | - |
| CPH39_RS19165 (3959891) | 3959891..3960448 | - | 558 | WP_000526668.1 | protein YmfL | - |
| CPH39_RS19170 (3960441) | 3960441..3960701 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| CPH39_RS19175 (3960799) | 3960799..3961491 | + | 693 | WP_001020632.1 | XRE family transcriptional regulator | - |
| CPH39_RS19180 (3962194) | 3962194..3962556 | + | 363 | WP_000135680.1 | protein YfdP | - |
| CPH39_RS19185 (3962622) | 3962622..3963446 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| CPH39_RS19190 (3963574) | 3963574..3964110 | + | 537 | WP_000008185.1 | 5'-deoxynucleotidase | - |
| CPH39_RS19195 (3964101) | 3964101..3964463 | + | 363 | WP_001242726.1 | phage protein | - |
| CPH39_RS19200 (3964463) | 3964463..3964768 | + | 306 | WP_000206732.1 | protein YfdT | - |
| CPH39_RS26630 (3964684) | 3964684..3965118 | + | 435 | WP_077941726.1 | helix-turn-helix domain-containing protein | - |
| CPH39_RS19205 (3965040) | 3965040..3966158 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CPH39_RS19215 (3966363) | 3966363..3967616 | - | 1254 | WP_053884044.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CPH39_RS19220 (3967628) | 3967628..3968731 | - | 1104 | WP_053884042.1 | glutamate 5-kinase | - |
| CPH39_RS19225 (3969019) | 3969019..3970074 | + | 1056 | WP_096220709.1 | phosphoporin PhoE | - |
| CPH39_RS19230 (3970113) | 3970113..3970514 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3971232) | 3971232..3971312 | - | 81 | NuclAT_11 | - | - |
| - (3971232) | 3971232..3971312 | - | 81 | NuclAT_11 | - | - |
| - (3971232) | 3971232..3971312 | - | 81 | NuclAT_11 | - | - |
| - (3971232) | 3971232..3971312 | - | 81 | NuclAT_11 | - | - |
| CPH39_RS19235 (3970572) | 3970572..3971816 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| CPH39_RS19240 (3971908) | 3971908..3972366 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CPH39_RS19245 (3972627) | 3972627..3974084 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| CPH39_RS19250 (3974141) | 3974141..3974281 | - | 141 | Protein_3793 | peptide chain release factor H | - |
| CPH39_RS19255 (3974331) | 3974331..3975544 | + | 1214 | WP_162830753.1 | IS3 family transposase IS629 | Transposase |
| CPH39_RS19260 (3975586) | 3975586..3975975 | - | 390 | Protein_3795 | peptide chain release factor H | - |
| CPH39_RS19265 (3975974) | 3975974..3976177 | - | 204 | Protein_3796 | RtcB family protein | - |
| CPH39_RS19270 (3976496) | 3976496..3976948 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| CPH39_RS19275 (3976945) | 3976945..3978000 | - | 1056 | WP_096220692.1 | DNA polymerase IV | - |
| CPH39_RS19280 (3978071) | 3978071..3978856 | - | 786 | WP_000207551.1 | hypothetical protein | VF |
| CPH39_RS19285 (3978828) | 3978828..3980540 | + | 1713 | Protein_3800 | hypothetical protein | VF |
| CPH39_RS19290 (3980645) | 3980645..3980923 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| CPH39_RS19295 (3980916) | 3980916..3981272 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CPH39_RS19300 (3981329) | 3981329..3982078 | - | 750 | WP_053884036.1 | hypothetical protein | VF |
| CPH39_RS19305 (3982288) | 3982288..3982548 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| CPH39_RS19310 (3982551) | 3982551..3982829 | + | 279 | WP_096220693.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| CPH39_RS19315 (3982985) | 3982985..3983725 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| CPH39_RS19320 (3983696) | 3983696..3984463 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| CPH39_RS19325 (3984669) | 3984669..3985247 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| CPH39_RS19330 (3985487) | 3985487..3987931 | + | 2445 | WP_000973077.1 | acyl-CoA dehydrogenase FadE | - |
| CPH39_RS19335 (3987974) | 3987974..3988420 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|