MGE detailed information
MGE type: Prophage MGE length: 73214 bp
Accession: NZ_CP043279 Location: 3694936..3768149 Organism: Escherichia coli strain WCHEC025157 Replicon: chromosome
Accession: NZ_CP043279 Location: 3694936..3768149 Organism: Escherichia coli strain WCHEC025157 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK41_RS17635 (3690684) | 3690684..3691832 | - | 1149 | WP_001336040.1 | hypothetical protein | - |
| FYK41_RS17640 (3692228) | 3692228..3692467 | - | 240 | WP_224630670.1 | hypothetical protein | - |
| FYK41_RS17645 (3692973) | 3692973..3693128 | - | 156 | Protein_3474 | ATP-binding protein | - |
| FYK41_RS17650 (3693172) | 3693172..3693408 | - | 237 | Protein_3475 | IS21 family transposase | - |
| FYK41_RS17655 (3694240) | 3694240..3694842 | - | 603 | WP_021527306.1 | hypothetical protein | - |
| FYK41_RS17660 (3694936) | 3694936..3695142 | - | 207 | WP_001371489.1 | AlpA family transcriptional regulator | - |
| FYK41_RS17665 (3695522) | 3695522..3696313 | - | 792 | WP_072647955.1 | hypothetical protein | - |
| FYK41_RS17670 (3697278) | 3697278..3697490 | + | 213 | WP_000453335.1 | hemolysin expression modulator Hha | - |
| FYK41_RS17675 (3697722) | 3697722..3698321 | + | 600 | WP_072647954.1 | inovirus-type Gp2 protein | - |
| FYK41_RS17680 (3698703) | 3698703..3699086 | + | 384 | WP_072647919.1 | putative zinc ribbon protein | - |
| FYK41_RS17685 (3699083) | 3699083..3699508 | + | 426 | WP_001013305.1 | putative zinc ribbon protein | - |
| FYK41_RS17690 (3700280) | 3700280..3702337 | + | 2058 | WP_072647918.1 | AAA family ATPase | - |
| FYK41_RS17695 (3702330) | 3702330..3703616 | + | 1287 | WP_000005572.1 | McrC family protein | - |
| FYK41_RS17700 (3703961) | 3703961..3704992 | - | 1032 | Protein_3485 | DUF3387 domain-containing protein | - |
| FYK41_RS17705 (3705003) | 3705003..3705491 | - | 489 | Protein_3486 | IS3 family transposase ISLad1 | Transposase |
| FYK41_RS17710 (3705572) | 3705572..3707080 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| FYK41_RS17715 (3707753) | 3707753..3708178 | - | 426 | Protein_3488 | IS3 family transposase | - |
| FYK41_RS17720 (3708166) | 3708166..3708246 | + | 81 | Protein_3489 | hypothetical protein | - |
| FYK41_RS17725 (3708243) | 3708243..3709393 | + | 1151 | Protein_3490 | IS30 family transposase IS30D | Transposase |
| FYK41_RS17730 (3709406) | 3709406..3709663 | - | 258 | Protein_3491 | IS3 family transposase IS911 | Transposase |
| FYK41_RS17735 (3709733) | 3709733..3710026 | - | 294 | WP_001091149.1 | hypothetical protein | - |
| FYK41_RS17740 (3710115) | 3710115..3712985 | - | 2871 | WP_072647924.1 | DEAD/DEAH box helicase family protein | - |
| FYK41_RS17745 (3712988) | 3712988..3714616 | - | 1629 | WP_072647923.1 | site-specific DNA-methyltransferase | - |
| FYK41_RS17750 (3714626) | 3714626..3717013 | - | 2388 | WP_072647922.1 | S8 family peptidase | - |
| FYK41_RS17755 (3717023) | 3717023..3718003 | - | 981 | WP_072647921.1 | ATP-binding protein | - |
| FYK41_RS17760 (3718029) | 3718029..3720878 | - | 2850 | WP_072647920.1 | SNF2-related protein | - |
| FYK41_RS17765 (3721179) | 3721179..3721349 | + | 171 | WP_072647925.1 | hypothetical protein | - |
| FYK41_RS17770 (3721352) | 3721352..3721762 | + | 411 | WP_233291320.1 | DUF2931 family protein | - |
| FYK41_RS17775 (3722144) | 3722144..3722545 | + | 402 | WP_143190917.1 | putative zinc ribbon protein | - |
| FYK41_RS17780 (3722533) | 3722533..3722967 | + | 435 | WP_001221620.1 | zinc-ribbon domain-containing protein | - |
| FYK41_RS17785 (3723322) | 3723322..3723603 | + | 282 | WP_224630663.1 | transposase | - |
| FYK41_RS17790 (3723906) | 3723906..3724599 | - | 694 | Protein_3503 | IS1 family transposase IS1N | Transposase |
| FYK41_RS17795 (3724852) | 3724852..3726321 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| FYK41_RS17800 (3726426) | 3726426..3728795 | + | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| FYK41_RS17805 (3728870) | 3728870..3730369 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| FYK41_RS17810 (3730512) | 3730512..3731201 | + | 690 | Protein_3507 | IS1 family transposase | - |
| FYK41_RS17815 (3731402) | 3731402..3732472 | - | 1071 | WP_000920172.1 | hypothetical protein | - |
| FYK41_RS17820 (3732450) | 3732450..3734156 | - | 1707 | WP_000132879.1 | zinc ribbon domain-containing protein | - |
| FYK41_RS17825 (3734149) | 3734149..3735357 | - | 1209 | WP_072647950.1 | N-6 DNA methylase | - |
| FYK41_RS17830 (3735599) | 3735599..3736807 | - | 1209 | WP_000772656.1 | hypothetical protein ; Integrase | Integrase |
| FYK41_RS17840 (3737161) | 3737161..3738414 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FYK41_RS17845 (3738426) | 3738426..3739529 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| FYK41_RS17850 (3739817) | 3739817..3740872 | + | 1056 | WP_039023169.1 | phosphoporin PhoE | - |
| FYK41_RS17855 (3740911) | 3740911..3741312 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3742030) | 3742030..3742110 | - | 81 | NuclAT_11 | - | - |
| - (3742030) | 3742030..3742110 | - | 81 | NuclAT_11 | - | - |
| - (3742030) | 3742030..3742110 | - | 81 | NuclAT_11 | - | - |
| - (3742030) | 3742030..3742110 | - | 81 | NuclAT_11 | - | - |
| FYK41_RS17860 (3741370) | 3741370..3742614 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| FYK41_RS17865 (3742706) | 3742706..3743164 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| FYK41_RS17870 (3743425) | 3743425..3744882 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| FYK41_RS17875 (3744939) | 3744939..3745460 | - | 522 | Protein_3519 | peptide chain release factor H | - |
| FYK41_RS17880 (3745456) | 3745456..3745662 | - | 207 | Protein_3520 | RtcB family protein | - |
| FYK41_RS17885 (3745980) | 3745980..3746432 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| FYK41_RS17890 (3746442) | 3746442..3746840 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| FYK41_RS17895 (3746843) | 3746843..3747136 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| FYK41_RS17900 (3747188) | 3747188..3748243 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| FYK41_RS17905 (3748314) | 3748314..3749099 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| FYK41_RS17910 (3749071) | 3749071..3750783 | + | 1713 | Protein_3526 | hypothetical protein | VF |
| FYK41_RS17915 (3751007) | 3751007..3751504 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| FYK41_RS17920 (3751680) | 3751680..3752429 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| FYK41_RS17925 (3752639) | 3752639..3752899 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| FYK41_RS17930 (3752902) | 3752902..3753180 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| FYK41_RS17935 (3753336) | 3753336..3754076 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| FYK41_RS17940 (3754047) | 3754047..3754814 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FYK41_RS17945 (3755020) | 3755020..3755598 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| FYK41_RS17950 (3755838) | 3755838..3758282 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| FYK41_RS17955 (3758325) | 3758325..3758771 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| FYK41_RS17960 (3758952) | 3758952..3759722 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| FYK41_RS17965 (3759763) | 3759763..3760899 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| FYK41_RS17970 (3761330) | 3761330..3761722 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| FYK41_RS17975 (3761700) | 3761700..3765932 | - | 4233 | WP_039023185.1 | hypothetical protein | VF |
| FYK41_RS17980 (3766008) | 3766008..3768149 | - | 2142 | WP_032329316.1 | hypothetical protein | VF |
| FYK41_RS17985 (3768359) | 3768359..3768877 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| FYK41_RS17990 (3769572) | 3769572..3770072 | + | 501 | WP_000037397.1 | type VI secretion system contractile sheath small subunit | - |
| FYK41_RS17995 (3770107) | 3770107..3770331 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| FYK41_RS18000 (3770382) | 3770382..3771857 | + | 1476 | WP_000056989.1 | type VI secretion system contractile sheath large subunit | - |
| FYK41_RS18005 (3771864) | 3771864..3772277 | + | 414 | WP_000611744.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|