MGE detailed information
MGE type: Conjugative plasmid MGE length: 96650 bp
Accession: NZ_CP043268 Location: 1..96650 Organism: Escherichia albertii strain RM9974 Replicon: plasmid p3RM9974
Accession: NZ_CP043268 Location: 1..96650 Organism: Escherichia albertii strain RM9974 Replicon: plasmid p3RM9974
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK18_RS24550 (557) | 557..1711 | + | 1155 | WP_001139958.1 | site-specific integrase | - |
| FYK18_RS24555 (1862) | 1862..2686 | + | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| FYK18_RS24560 (2772) | 2772..3974 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| FYK18_RS24565 (4034) | 4034..4618 | + | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| FYK18_RS24570 (5013) | 5013..5471 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| FYK18_RS24575 (5468) | 5468..6286 | + | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| FYK18_RS24580 (6283) | 6283..7431 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| FYK18_RS24585 (7428) | 7428..7718 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| FYK18_RS24590 (7733) | 7733..8284 | + | 552 | WP_000014584.1 | phospholipase D family protein | - |
| FYK18_RS24595 (8374) | 8374..12141 | + | 3768 | WP_001141535.1 | DUF5710 domain-containing protein | - |
| FYK18_RS24600 (12159) | 12159..12506 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| FYK18_RS24605 (12503) | 12503..13195 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| FYK18_RS24610 (13206) | 13206..14189 | + | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| FYK18_RS24615 (14192) | 14192..15481 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| FYK18_RS24620 (15481) | 15481..16185 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| FYK18_RS24625 (16185) | 16185..16712 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| FYK18_RS24630 (16763) | 16763..17167 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| FYK18_RS24635 (17231) | 17231..17419 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| FYK18_RS24640 (17403) | 17403..18203 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| FYK18_RS24645 (18293) | 18293..21337 | + | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| FYK18_RS24650 (21337) | 21337..21951 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| FYK18_RS24655 (21918) | 21918..23120 | + | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| FYK18_RS24660 (23149) | 23149..23733 | + | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| FYK18_RS24665 (23830) | 23830..25998 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| FYK18_RS24670 (26069) | 26069..26731 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| FYK18_RS24675 (26803) | 26803..27012 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| FYK18_RS24680 (27404) | 27404..27580 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - (28066) | 28066..28117 | + | 52 | NuclAT_1 | - | - |
| - (28066) | 28066..28117 | + | 52 | NuclAT_1 | - | - |
| - (28066) | 28066..28117 | + | 52 | NuclAT_1 | - | - |
| - (28066) | 28066..28117 | + | 52 | NuclAT_1 | - | - |
| FYK18_RS24685 (28504) | 28504..28755 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| FYK18_RS24690 (28827) | 28827..28979 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - (29029) | 29029..29091 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (29029) | 29029..29091 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (29029) | 29029..29091 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (29029) | 29029..29091 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| FYK18_RS24695 (29271) | 29271..30479 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| FYK18_RS24700 (30498) | 30498..31568 | + | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| FYK18_RS24705 (31561) | 31561..33852 | + | 2292 | WP_001289271.1 | F-type conjugative transfer protein TrbC | - |
| FYK18_RS24710 (33889) | 33889..36588 | - | 2700 | WP_001474686.1 | IncI1-type relaxase NikB | - |
| FYK18_RS24715 (36599) | 36599..36931 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| FYK18_RS24720 (37165) | 37165..37500 | + | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| FYK18_RS24725 (37586) | 37586..38434 | - | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| FYK18_RS24730 (39015) | 39015..39266 | + | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| FYK18_RS24735 (39297) | 39297..39590 | - | 294 | WP_077250487.1 | hypothetical protein | - |
| FYK18_RS24740 (39590) | 39590..40492 | - | 903 | WP_000038404.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| FYK18_RS24745 (40557) | 40557..40823 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| FYK18_RS24750 (40917) | 40917..41351 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| FYK18_RS24755 (42080) | 42080..42580 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| FYK18_RS24760 (43027) | 43027..44202 | - | 1176 | WP_000942657.1 | RNA-guided endonuclease TnpB family protein | - |
| FYK18_RS24765 (44332) | 44332..45051 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| FYK18_RS24770 (45048) | 45048..45482 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| FYK18_RS24775 (45537) | 45537..47495 | - | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| FYK18_RS24780 (47554) | 47554..47787 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| FYK18_RS24785 (47845) | 47845..48372 | - | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| FYK18_RS24790 (48741) | 48741..48809 | + | 69 | Protein_48 | pilus protein | - |
| FYK18_RS24795 (49540) | 49540..51207 | + | 1668 | WP_265451128.1 | group II intron reverse transcriptase/maturase | - |
| FYK18_RS24800 (51485) | 51485..51676 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| FYK18_RS24805 (51673) | 51673..52095 | - | 423 | WP_000271725.1 | DUF1380 family protein | - |
| FYK18_RS24810 (52142) | 52142..52567 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| FYK18_RS24815 (52985) | 52985..53755 | - | 771 | WP_024133193.1 | hypothetical protein | - |
| FYK18_RS24820 (53806) | 53806..54292 | - | 487 | Protein_54 | DUF1380 family protein | - |
| FYK18_RS24825 (54252) | 54252..54473 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| FYK18_RS24830 (54474) | 54474..55157 | - | 684 | WP_000086178.1 | DNA methylase | - |
| FYK18_RS24835 (55234) | 55234..55545 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| FYK18_RS24840 (55542) | 55542..56444 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| FYK18_RS24845 (56862) | 56862..57110 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| FYK18_RS24850 (57107) | 57107..57544 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FYK18_RS24855 (57544) | 57544..58818 | + | 1275 | WP_094790326.1 | Y-family DNA polymerase | - |
| FYK18_RS24860 (58820) | 58820..59236 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| FYK18_RS24865 (59229) | 59229..60209 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| FYK18_RS24870 (60623) | 60623..60931 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| FYK18_RS24875 (61018) | 61018..61662 | - | 645 | WP_001144036.1 | ParA family protein | - |
| FYK18_RS24880 (61842) | 61842..62621 | - | 780 | WP_001164198.1 | site-specific integrase | - |
| FYK18_RS24885 (62623) | 62623..63036 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| FYK18_RS24890 (63568) | 63568..64494 | + | 927 | WP_001290416.1 | hypothetical protein | - |
| FYK18_RS24895 (64539) | 64539..64793 | + | 255 | WP_000678527.1 | hypothetical protein | - |
| FYK18_RS24900 (65292) | 65292..65636 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| FYK18_RS24905 (65812) | 65812..66813 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| FYK18_RS24910 (67165) | 67165..67419 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| FYK18_RS24915 (67419) | 67419..68009 | + | 591 | WP_000194550.1 | hypothetical protein | - |
| FYK18_RS24920 (68027) | 68027..68374 | - | 348 | WP_000142436.1 | DUF6404 family protein | - |
| FYK18_RS24925 (68493) | 68493..68840 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| FYK18_RS24930 (68858) | 68858..70738 | - | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| FYK18_RS24935 (71017) | 71017..72363 | - | 1347 | WP_001132032.1 | protein YagA | - |
| FYK18_RS24940 (72717) | 72717..73319 | + | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| FYK18_RS24945 (73375) | 73375..73869 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| FYK18_RS24950 (73869) | 73869..74135 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| FYK18_RS24955 (74612) | 74612..75061 | - | 450 | WP_001236003.1 | hypothetical protein | - |
| FYK18_RS24960 (75202) | 75202..76050 | - | 849 | WP_001057991.1 | 3'-5' exonuclease | - |
| FYK18_RS24965 (76090) | 76090..76368 | - | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| FYK18_RS24970 (76368) | 76368..76637 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| FYK18_RS24975 (77546) | 77546..78577 | - | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| FYK18_RS24980 (79583) | 79583..79813 | + | 231 | WP_228772074.1 | ash family protein | - |
| FYK18_RS24985 (79731) | 79731..80018 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| FYK18_RS24990 (80460) | 80460..80993 | + | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| FYK18_RS24995 (81247) | 81247..81930 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| FYK18_RS25000 (81944) | 81944..82510 | + | 567 | WP_000776428.1 | protein TraD | - |
| FYK18_RS25005 (82778) | 82778..83032 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| FYK18_RS25010 (83075) | 83075..83527 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| FYK18_RS25015 (84201) | 84201..85267 | + | 1067 | Protein_93 | type IV pilus biogenesis lipoprotein PilL | - |
| FYK18_RS25020 (85267) | 85267..85704 | + | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| FYK18_RS25025 (85718) | 85718..86722 | + | 1005 | Protein_95 | secretin N-terminal domain-containing protein | - |
| FYK18_RS25030 (86814) | 86814..88042 | + | 1229 | WP_088895425.1 | IS3-like element IS2 family transposase | - |
| FYK18_RS25035 (88056) | 88056..88736 | + | 681 | Protein_97 | PilN family type IVB pilus formation outer membrane protein | - |
| FYK18_RS25040 (88729) | 88729..90024 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| FYK18_RS25045 (90011) | 90011..90463 | + | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| FYK18_RS25050 (90633) | 90633..92027 | + | 1395 | WP_001292897.1 | ATPase, T2SS/T4P/T4SS family | - |
| FYK18_RS25055 (92040) | 92040..93137 | + | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| FYK18_RS25060 (93155) | 93155..93769 | + | 615 | WP_000959785.1 | type 4 pilus major pilin | - |
| FYK18_RS25065 (93779) | 93779..94339 | + | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| FYK18_RS25070 (94324) | 94324..94980 | + | 657 | WP_001193553.1 | prepilin peptidase | - |
| FYK18_RS25075 (94980) | 94980..96068 | + | 1089 | Protein_105 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| FYK18_RS25080 (96268) | 96268..96516 | - | 249 | WP_001349157.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|