MGE detailed information
MGE type: Conjugative plasmid MGE length: 115935 bp
Accession: NZ_CP043228 Location: 1..115935 Organism: Escherichia coli strain Ec-050 Replicon: plasmid pEc-050-TEM-30
Accession: NZ_CP043228 Location: 1..115935 Organism: Escherichia coli strain Ec-050 Replicon: plasmid pEc-050-TEM-30
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FX998_RS23425 () | 427..2718 | + | 2292 | WP_001289275.1 | hypothetical protein | - |
| FX998_RS23430 () | 2755..5454 | - | 2700 | WP_006855641.1 | Protein TraI | Relaxase |
| FX998_RS23435 () | 5465..5797 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| FX998_RS23440 () | 6031..6366 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| FX998_RS23445 () | 6452..6793 | - | 342 | Protein_4 | DUF4942 domain-containing protein | - |
| FX998_RS23450 () | 6989..8532 | + | 1544 | Protein_5 | IS21 family transposase ISEc12 | Transposase |
| FX998_RS23455 () | 8547..9293 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| FX998_RS23460 () | 9351..9890 | - | 540 | WP_148905644.1 | DUF4942 domain-containing protein | - |
| FX998_RS23470 () | 10239..10436 | + | 198 | WP_001412266.1 | hypothetical protein | - |
| FX998_RS23475 () | 10470..10721 | + | 252 | WP_065793177.1 | helix-turn-helix domain-containing protein | - |
| FX998_RS25505 () | 10752..10922 | - | 171 | WP_000150325.1 | hypothetical protein | - |
| FX998_RS23480 () | 10984..11925 | - | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| FX998_RS23485 () | 11990..12256 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| FX998_RS23490 () | 12348..12782 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| FX998_RS23505 () | 13511..14011 | - | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| FX998_RS23510 () | 14040..14348 | - | 309 | Protein_15 | DUF1472 domain-containing protein | - |
| FX998_RS23515 () | 14474..15070 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| FX998_RS23520 () | 15067..15786 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| FX998_RS23525 () | 15783..16217 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| FX998_RS23530 () | 16272..18230 | - | 1959 | WP_001145453.1 | ParB/RepB/Spo0J family partition protein | - |
| FX998_RS23535 () | 18289..18522 | - | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| FX998_RS23540 () | 18580..19107 | - | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| FX998_RS23550 () | 19476..19544 | + | 69 | Protein_22 | pilus protein | - |
| FX998_RS23555 () | 20275..21942 | + | 1668 | WP_001762494.1 | group II intron reverse transcriptase/maturase | - |
| FX998_RS23570 () | 22220..22411 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| FX998_RS23575 () | 22408..22830 | - | 423 | WP_000271729.1 | DUF1380 family protein | - |
| FX998_RS23580 () | 22877..23179 | - | 303 | WP_072132163.1 | antirestriction protein | - |
| FX998_RS23585 () | 23275..23847 | - | 573 | WP_015059345.1 | YubH family protein | - |
| FX998_RS23590 () | 23732..24541 | - | 810 | Protein_28 | hypothetical protein | - |
| FX998_RS23595 () | 24541..24975 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| FX998_RS23600 () | 24987..25208 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| FX998_RS23605 () | 25209..25892 | - | 684 | WP_000086178.1 | DNA methylase | - |
| FX998_RS23610 () | 25969..26280 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| FX998_RS23615 () | 26277..27179 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| FX998_RS23625 () | 27597..27845 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| FX998_RS23630 () | 27842..28279 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FX998_RS23635 () | 28279..29553 | + | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| FX998_RS23640 () | 29555..29971 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| FX998_RS23645 () | 29964..30944 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| FX998_RS23650 () | 31358..31666 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| FX998_RS23655 () | 31753..32397 | - | 645 | WP_001144036.1 | ParA family protein | - |
| FX998_RS23660 () | 32577..33356 | - | 780 | WP_001164198.1 | site-specific integrase | - |
| FX998_RS23665 () | 33358..33771 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| FX998_RS23670 () | 34303..35229 | + | 927 | WP_001290416.1 | hypothetical protein | - |
| FX998_RS23675 () | 35274..35531 | + | 258 | WP_001596999.1 | hypothetical protein | - |
| FX998_RS23680 () | 35565..36269 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| FX998_RS23685 () | 36335..36619 | + | 285 | Protein_46 | recombinase family protein | - |
| FX998_RS23695 () | 36966..37979 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| FX998_RS23700 () | 38136..38609 | + | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| FX998_RS23705 () | 38702..39493 | + | 792 | WP_001206317.1 | Streptomycin 3''-adenylyltransferase | ARG |
| FX998_RS23710 () | 39657..40004 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| FX998_RS23715 () | 39998..40807 | + | 810 | Protein_51 | Dihydropteroate synthase | ARG |
| FX998_RS23720 () | 40860..41564 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FX998_RS23725 () | 41686..42546 | + | 861 | WP_021561477.1 | Beta-lactamase TEM | ARG |
| FX998_RS23730 () | 42700..45072 | + | 2373 | Protein_54 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FX998_RS23735 () | 45106..45378 | + | 273 | Protein_55 | IS91 family transposase ISVsa3 | Transposase |
| FX998_RS23740 () | 45409..46293 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| FX998_RS23745 () | 46510..47724 | + | 1215 | WP_039026029.1 | Inner membrane transport protein YdhC | ARG |
| FX998_RS23750 () | 47752..48057 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| FX998_RS23755 () | 48169..49662 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| FX998_RS23760 () | 49693..49944 | + | 252 | WP_001445143.1 | hypothetical protein | - |
| FX998_RS23765 () | 49838..50140 | - | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| FX998_RS23770 () | 50227..51042 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| FX998_RS23780 () | 51258..51962 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| FX998_RS23790 () | 52548..52892 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| FX998_RS23795 () | 53068..54069 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| FX998_RS23800 () | 54420..54677 | + | 258 | WP_000371888.1 | hypothetical protein | - |
| FX998_RS23805 () | 54677..55267 | + | 591 | WP_000194553.1 | hypothetical protein | - |
| FX998_RS23810 () | 55287..55634 | - | 348 | WP_001407239.1 | hypothetical protein | - |
| FX998_RS23815 () | 55753..56100 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| FX998_RS23820 () | 56118..57998 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| FX998_RS23825 () | 58277..59623 | - | 1347 | WP_001132032.1 | hypothetical protein | - |
| FX998_RS23835 () | 59977..60579 | + | 603 | WP_000517695.1 | hypothetical protein | - |
| FX998_RS23840 () | 60635..61129 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| FX998_RS23845 () | 61129..61395 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| FX998_RS23855 () | 61872..62345 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| FX998_RS23860 () | 62462..63310 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| FX998_RS23865 () | 63350..63631 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FX998_RS23870 () | 63628..63897 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| FX998_RS25510 () | 63952..64110 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| FX998_RS23885 () | 64806..65837 | - | 1032 | WP_000907873.1 | replication initiation protein | - |
| FX998_RS23900 () | 66810..67073 | + | 264 | WP_001324596.1 | ash family protein | - |
| FX998_RS23905 () | 66991..67278 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| FX998_RS23915 () | 67720..68253 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| FX998_RS23925 () | 68507..69190 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| FX998_RS23930 () | 69204..69770 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| FX998_RS23940 () | 70038..70292 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| FX998_RS23945 () | 70335..70787 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| FX998_RS23955 () | 71461..72528 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| FX998_RS23960 () | 72528..72965 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| FX998_RS23965 () | 72979..74661 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| FX998_RS23970 () | 74654..75949 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| FX998_RS23975 () | 75936..76388 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| FX998_RS23980 () | 76399..77952 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| FX998_RS23985 () | 77965..79062 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| FX998_RS23990 () | 79080..79694 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| FX998_RS23995 () | 79704..80264 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| FX998_RS24000 () | 80249..80905 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| FX998_RS24005 () | 80905..82329 | + | 1425 | WP_001389385.1 | hypothetical protein | VF |
| FX998_RS24010 () | 82326..82523 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| FX998_RS24030 () | 83611..83829 | - | 219 | WP_071527775.1 | shufflon protein D' | - |
| FX998_RS24040 () | 83878..83964 | - | 87 | Protein_101 | shufflon protein D' | - |
| FX998_RS24045 () | 83963..85117 | + | 1155 | WP_001139955.1 | integrase | - |
| FX998_RS24050 () | 85268..86092 | + | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| FX998_RS24055 () | 86178..87380 | + | 1203 | WP_065793176.1 | conjugal transfer protein TraF | - |
| FX998_RS24060 () | 87440..88024 | + | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| FX998_RS24065 () | 88419..88877 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| FX998_RS24070 () | 88874..89692 | + | 819 | WP_032220737.1 | hypothetical protein | VF |
| FX998_RS24075 () | 89689..90837 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| FX998_RS24080 () | 90834..91124 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| FX998_RS24085 () | 91139..91690 | + | 552 | WP_000014586.1 | Phospholipase D | VF |
| FX998_RS24090 () | 91780..95544 | + | 3765 | WP_033560228.1 | DNA primase | - |
| FX998_RS24095 () | 95562..95909 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| FX998_RS24100 () | 95906..96598 | + | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| FX998_RS24105 () | 96609..97592 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| FX998_RS24110 () | 97595..98884 | + | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| FX998_RS24115 () | 98884..99588 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| FX998_RS24120 () | 99588..100115 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| FX998_RS24125 () | 100166..100570 | + | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| FX998_RS24130 () | 100634..100822 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| FX998_RS24135 () | 100806..101606 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| FX998_RS24140 () | 101696..104740 | + | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| FX998_RS24145 () | 104740..105354 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| FX998_RS24150 () | 105321..106523 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| FX998_RS24155 () | 106552..107136 | + | 585 | WP_001476649.1 | IncI1-type conjugal transfer protein TraX | - |
| FX998_RS24160 () | 107233..109401 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| FX998_RS24165 () | 109472..110134 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| FX998_RS24170 () | 110232..110441 | + | 210 | WP_032178830.1 | hemolysin expression modulator Hha | - |
| FX998_RS24175 () | 110773..111177 | - | 405 | WP_001175009.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| FX998_RS24180 () | 111236..112462 | + | 1227 | WP_024186316.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| FX998_RS25515 () | 112507..112644 | + | 138 | WP_047088497.1 | hypothetical protein | - |
| FX998_RS24185 () | 113304..113555 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| FX998_RS24190 () | 113627..113779 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 113829..113891 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 113829..113891 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 113829..113891 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 113829..113891 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| FX998_RS24195 () | 114071..115279 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|