MGE detailed information
MGE type: Prophage MGE length: 21707 bp
Accession: NZ_CP043213 Location: 2102857..2124563 Organism: Escherichia coli O16:H48 strain CV601gfp Replicon: chromosome
Accession: NZ_CP043213 Location: 2102857..2124563 Organism: Escherichia coli O16:H48 strain CV601gfp Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA04_RS10290 () | 2099372..2100118 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| FYA04_RS10295 () | 2100207..2100893 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FYA04_RS10300 () | 2101070..2101273 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FYA04_RS10305 () | 2101308..2102768 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| FYA04_RS10310 () | 2102857..2104224 | - | 1368 | Protein_2012 | MHS family MFS transporter | - |
| FYA04_RS10315 () | 2104745..2104858 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| FYA04_RS10320 () | 2104927..2105160 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FYA04_RS10325 () | 2105477..2106067 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FYA04_RS10330 () | 2106165..2106740 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| FYA04_RS10335 () | 2106740..2107702 | - | 963 | WP_001027733.1 | phage tail protein | - |
| FYA04_RS10340 () | 2107653..2108222 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| FYA04_RS10345 () | 2108611..2108844 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FYA04_RS10350 () | 2108902..2109312 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FYA04_RS10355 () | 2109464..2109637 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FYA04_RS10360 () | 2109809..2109964 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| FYA04_RS10365 () | 2110043..2110108 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| FYA04_RS10370 () | 2110111..2110299 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| FYA04_RS10375 () | 2110310..2110522 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FYA04_RS10380 () | 2110885..2111382 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FYA04_RS10385 () | 2111379..2111912 | - | 534 | WP_001092971.1 | lysozyme | - |
| FYA04_RS10390 () | 2111909..2112220 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| FYA04_RS10395 () | 2112225..2112440 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FYA04_RS23085 () | 2112660..2112830 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| FYA04_RS10400 () | 2113194..2113409 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FYA04_RS10405 () | 2113710..2113922 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FYA04_RS10410 () | 2113977..2114066 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| FYA04_RS10415 () | 2114344..2115096 | - | 753 | WP_001047135.1 | antitermination protein | - |
| FYA04_RS10420 () | 2115110..2116159 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| FYA04_RS10425 () | 2116161..2116439 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| FYA04_RS10430 () | 2116506..2116757 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| FYA04_RS10435 () | 2116974..2117129 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FYA04_RS10440 () | 2117201..2117488 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FYA04_RS10445 () | 2117488..2117727 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FYA04_RS10450 () | 2117752..2118057 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| FYA04_RS10455 () | 2118260..2118592 | + | 333 | WP_001301033.1 | protein FlxA | - |
| FYA04_RS10460 () | 2119029..2119178 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| FYA04_RS10465 () | 2119213..2119491 | - | 279 | Protein_2044 | hypothetical protein | - |
| FYA04_RS10470 () | 2119475..2119705 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| FYA04_RS10475 () | 2119789..2120196 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| FYA04_RS10480 () | 2120363..2120518 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| FYA04_RS10485 () | 2120678..2120896 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| FYA04_RS10495 () | 2121464..2121652 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FYA04_RS10500 () | 2121649..2121840 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| FYA04_RS10505 () | 2121933..2122700 | + | 768 | Protein_2051 | exonuclease | - |
| FYA04_RS10510 () | 2122697..2123392 | + | 696 | Protein_2052 | IS3 family transposase IS2 | Transposase |
| FYA04_RS10515 () | 2123406..2124563 | + | 1158 | Protein_2053 | Tyrosine recombinase XerD ; Integrase | Integrase |
| FYA04_RS10525 () | 2124751..2125770 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FYA04_RS10530 () | 2125782..2126996 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FYA04_RS10535 () | 2127202..2127528 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| FYA04_RS10540 () | 2127663..2128004 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FYA04_RS10545 () | 2128039..2128599 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FYA04_RS10550 () | 2128602..2129312 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.002 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0 |