MGE detailed information
MGE type: Prophage MGE length: 21707 bp
Accession: NZ_CP043211 Location: 2516941..2538647 Organism: Escherichia coli O16:H48 strain PG20180050 Replicon: chromosome
Accession: NZ_CP043211 Location: 2516941..2538647 Organism: Escherichia coli O16:H48 strain PG20180050 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA05_RS12065 () | 2512192..2512902 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| FYA05_RS12070 () | 2512905..2513465 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FYA05_RS12075 () | 2513500..2513841 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FYA05_RS12080 () | 2513976..2514302 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| FYA05_RS12085 () | 2514508..2515722 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FYA05_RS12090 () | 2515734..2516753 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FYA05_RS12100 () | 2516941..2518098 | - | 1158 | Protein_2344 | Putative defective protein IntQ ; Integrase | Integrase |
| FYA05_RS12105 () | 2518112..2518807 | - | 696 | Protein_2345 | IS3 family transposase IS2 | Transposase |
| FYA05_RS12110 () | 2518804..2519571 | - | 768 | Protein_2346 | exonuclease | - |
| FYA05_RS12115 () | 2519664..2519855 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| FYA05_RS12120 () | 2519852..2520040 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FYA05_RS12130 () | 2520608..2520826 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| FYA05_RS12135 () | 2520986..2521141 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| FYA05_RS12140 () | 2521308..2521715 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| FYA05_RS12145 () | 2521799..2522029 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| FYA05_RS12150 () | 2522013..2522291 | + | 279 | Protein_2353 | hypothetical protein | - |
| FYA05_RS12155 () | 2522326..2522475 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| FYA05_RS12160 () | 2522912..2523244 | - | 333 | WP_001301033.1 | protein FlxA | - |
| FYA05_RS12165 () | 2523447..2523752 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| FYA05_RS12170 () | 2523777..2524016 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FYA05_RS12175 () | 2524016..2524303 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FYA05_RS12180 () | 2524375..2524530 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FYA05_RS12185 () | 2524747..2524998 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| FYA05_RS12190 () | 2525065..2525343 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| FYA05_RS12195 () | 2525345..2526394 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| FYA05_RS12200 () | 2526408..2527160 | + | 753 | WP_001047135.1 | antitermination protein | - |
| FYA05_RS12205 () | 2527438..2527527 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| FYA05_RS12210 () | 2527582..2527794 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FYA05_RS12215 () | 2528095..2528310 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FYA05_RS23165 () | 2528674..2528844 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| FYA05_RS12220 () | 2529064..2529279 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FYA05_RS12225 () | 2529284..2529595 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| FYA05_RS12230 () | 2529592..2530125 | + | 534 | WP_001092971.1 | lysozyme | - |
| FYA05_RS12235 () | 2530122..2530619 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FYA05_RS12240 () | 2530982..2531194 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FYA05_RS12245 () | 2531205..2531393 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| FYA05_RS12250 () | 2531396..2531461 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| FYA05_RS12255 () | 2531540..2531695 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| FYA05_RS12260 () | 2531867..2532040 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FYA05_RS12265 () | 2532192..2532602 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FYA05_RS12270 () | 2532660..2532893 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FYA05_RS12275 () | 2533282..2533851 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| FYA05_RS12280 () | 2533802..2534764 | + | 963 | WP_001027733.1 | phage tail protein | - |
| FYA05_RS12285 () | 2534764..2535339 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| FYA05_RS12290 () | 2535437..2536027 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FYA05_RS12295 () | 2536344..2536577 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FYA05_RS12300 () | 2536646..2536759 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| FYA05_RS12305 () | 2537280..2538647 | + | 1368 | Protein_2385 | MHS family MFS transporter | - |
| FYA05_RS12310 () | 2538736..2540196 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| FYA05_RS12315 () | 2540231..2540434 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FYA05_RS12320 () | 2540611..2541297 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FYA05_RS12325 () | 2541386..2542132 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.002 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0 |