MGE detailed information
MGE type: Genomic_island MGE length: 29086 bp
Accession: NZ_CP043207 Location: 1100934..1130019 Organism: Escherichia coli O16:H48 strain PG20180053 Replicon: chromosome
Accession: NZ_CP043207 Location: 1100934..1130019 Organism: Escherichia coli O16:H48 strain PG20180053 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA07_RS05300 () | 1096413..1097681 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| FYA07_RS05305 () | 1097701..1098678 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| FYA07_RS05310 () | 1099014..1101266 | - | 2253 | Protein_1034 | hypothetical protein | - |
| FYA07_RS05325 () | 1102652..1104025 | + | 1374 | Protein_1035 | DUF5507 domain-containing protein | - |
| FYA07_RS05330 () | 1104389..1104598 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| FYA07_RS05335 () | 1104753..1104872 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| FYA07_RS05340 () | 1104937..1109517 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| FYA07_RS05345 () | 1109881..1110210 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| FYA07_RS05350 () | 1110231..1110548 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FYA07_RS05355 () | 1110586..1110786 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| FYA07_RS05360 () | 1110795..1111277 | - | 483 | WP_001407480.1 | RadC family protein | - |
| FYA07_RS05365 () | 1111286..1111744 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| FYA07_RS05370 () | 1111847..1112070 | - | 224 | Protein_1044 | DUF905 domain-containing protein | - |
| FYA07_RS05375 () | 1112642..1114345 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| FYA07_RS05380 () | 1114487..1115496 | + | 1010 | Protein_1046 | arsenic transporter | - |
| FYA07_RS05385 () | 1115509..1115823 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| FYA07_RS05390 () | 1116048..1116515 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| FYA07_RS05395 () | 1116539..1116982 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| FYA07_RS05400 () | 1116982..1117218 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| FYA07_RS05405 () | 1117259..1117960 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| FYA07_RS05410 () | 1118177..1118998 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| FYA07_RS05415 () | 1119090..1119953 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| FYA07_RS05420 () | 1120308..1120679 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| FYA07_RS05425 () | 1120672..1121745 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| FYA07_RS05430 () | 1121887..1122150 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| FYA07_RS05435 () | 1122510..1124126 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| FYA07_RS05440 () | 1124123..1126312 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| FYA07_RS05445 () | 1126490..1127116 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| FYA07_RS05450 () | 1127269..1128678 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| FYA07_RS05455 () | 1128807..1129019 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| FYA07_RS05460 () | 1129063..1130019 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| FYA07_RS05465 () | 1130263..1131504 | - | 1242 | WP_000101723.1 | integrase | - |
| FYA07_RS05475 () | 1132285..1132767 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| FYA07_RS05480 () | 1132938..1133375 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| FYA07_RS05485 () | 1133365..1133655 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| FYA07_RS05490 () | 1133717..1134058 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0.002 |