MGE detailed information
MGE type: Prophage MGE length: 21707 bp
Accession: NZ_CP043199 Location: 2664248..2685954 Organism: Escherichia coli O16:H48 strain PG20180060 Replicon: chromosome
Accession: NZ_CP043199 Location: 2664248..2685954 Organism: Escherichia coli O16:H48 strain PG20180060 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA11_RS12905 () | 2660763..2661509 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| FYA11_RS12910 () | 2661598..2662284 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FYA11_RS12915 () | 2662461..2662664 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FYA11_RS12920 () | 2662699..2664159 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| FYA11_RS12925 () | 2664248..2665615 | - | 1368 | Protein_2503 | MHS family MFS transporter | - |
| FYA11_RS12930 () | 2666136..2666249 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| FYA11_RS12935 () | 2666318..2666551 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FYA11_RS12940 () | 2666868..2667458 | + | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FYA11_RS12945 () | 2667556..2668131 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| FYA11_RS12950 () | 2668131..2669093 | - | 963 | WP_001027733.1 | phage tail protein | - |
| FYA11_RS12955 () | 2669044..2669613 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| FYA11_RS12960 () | 2670002..2670235 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FYA11_RS12965 () | 2670293..2670703 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FYA11_RS12970 () | 2670855..2671028 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FYA11_RS12975 () | 2671200..2671355 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| FYA11_RS12980 () | 2671434..2671499 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| FYA11_RS12985 () | 2671502..2671690 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| FYA11_RS12990 () | 2671701..2671913 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FYA11_RS12995 () | 2672276..2672773 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FYA11_RS13000 () | 2672770..2673303 | - | 534 | WP_001092971.1 | lysozyme | - |
| FYA11_RS13005 () | 2673300..2673611 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| FYA11_RS13010 () | 2673616..2673831 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FYA11_RS23485 () | 2674051..2674221 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| FYA11_RS13015 () | 2674585..2674800 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FYA11_RS13020 () | 2675101..2675313 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FYA11_RS13025 () | 2675368..2675457 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| FYA11_RS13030 () | 2675735..2676487 | - | 753 | WP_001047135.1 | antitermination protein | - |
| FYA11_RS13035 () | 2676501..2677550 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| FYA11_RS13040 () | 2677552..2677830 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| FYA11_RS13045 () | 2677897..2678148 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| FYA11_RS13050 () | 2678365..2678520 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FYA11_RS13055 () | 2678592..2678879 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FYA11_RS13060 () | 2678879..2679118 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FYA11_RS13065 () | 2679143..2679448 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| FYA11_RS13070 () | 2679651..2679983 | + | 333 | WP_001301033.1 | protein FlxA | - |
| FYA11_RS13075 () | 2680420..2680569 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| FYA11_RS13080 () | 2680604..2680882 | - | 279 | Protein_2535 | hypothetical protein | - |
| FYA11_RS13085 () | 2680866..2681096 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| FYA11_RS13090 () | 2681180..2681587 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| FYA11_RS13095 () | 2681754..2681909 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| FYA11_RS13100 () | 2682069..2682287 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| FYA11_RS13110 () | 2682855..2683043 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FYA11_RS13115 () | 2683040..2683231 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| FYA11_RS13120 () | 2683324..2684091 | + | 768 | Protein_2542 | exonuclease | - |
| FYA11_RS13125 () | 2684088..2684783 | + | 696 | Protein_2543 | IS3 family transposase IS2 | Transposase |
| FYA11_RS13130 () | 2684797..2685954 | + | 1158 | Protein_2544 | Putative defective protein IntQ ; Integrase | Integrase |
| FYA11_RS13140 () | 2686142..2687161 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FYA11_RS13145 () | 2687173..2688387 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FYA11_RS13150 () | 2688593..2688919 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| FYA11_RS13155 () | 2689054..2689395 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FYA11_RS13160 () | 2689430..2689990 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FYA11_RS13165 () | 2689993..2690703 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.002 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0 |