MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP043197 Location: 3079977..3111857 Organism: Escherichia coli O16:H48 strain PG20180061 Replicon: chromosome
Accession: NZ_CP043197 Location: 3079977..3111857 Organism: Escherichia coli O16:H48 strain PG20180061 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA12_RS14950 () | 3076161..3077429 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| FYA12_RS14955 () | 3077449..3078426 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| FYA12_RS14960 () | 3078762..3081014 | - | 2253 | Protein_2894 | hypothetical protein | - |
| FYA12_RS14975 () | 3082400..3083773 | + | 1374 | Protein_2895 | DUF5507 domain-containing protein | - |
| FYA12_RS14980 () | 3084137..3084346 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| FYA12_RS14985 () | 3084501..3084620 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| FYA12_RS14990 () | 3084685..3089265 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| FYA12_RS14995 () | 3089629..3089958 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| FYA12_RS15000 () | 3089979..3090296 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FYA12_RS15005 () | 3090334..3090534 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| FYA12_RS15010 () | 3090543..3091025 | - | 483 | WP_001407480.1 | RadC family protein | - |
| FYA12_RS15015 () | 3091034..3091492 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| FYA12_RS15020 () | 3091595..3091818 | - | 224 | Protein_2904 | DUF905 domain-containing protein | - |
| FYA12_RS15025 () | 3092390..3094093 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| FYA12_RS15030 () | 3094235..3095244 | + | 1010 | Protein_2906 | arsenic transporter | - |
| FYA12_RS15035 () | 3095257..3095571 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| FYA12_RS15040 () | 3095796..3096263 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| FYA12_RS15045 () | 3096287..3096730 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| FYA12_RS15050 () | 3096730..3096966 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| FYA12_RS15055 () | 3097007..3097708 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| FYA12_RS15060 () | 3097925..3098746 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| FYA12_RS15065 () | 3098838..3099701 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| FYA12_RS15070 () | 3100056..3100427 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| FYA12_RS15075 () | 3100420..3101493 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| FYA12_RS15080 () | 3101635..3101898 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| FYA12_RS15085 () | 3102258..3103874 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| FYA12_RS15090 () | 3103871..3106060 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| FYA12_RS15095 () | 3106238..3106864 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| FYA12_RS15100 () | 3107017..3108426 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| FYA12_RS15105 () | 3108555..3108767 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| FYA12_RS15110 () | 3108811..3109767 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| FYA12_RS15115 () | 3110011..3111252 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| FYA12_RS15125 () | 3112033..3112515 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| FYA12_RS15130 () | 3112686..3113123 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| FYA12_RS15135 () | 3113113..3113403 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| FYA12_RS15140 () | 3113465..3113806 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| FYA12_RS15145 () | 3113955..3115616 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| FYA12_RS15150 () | 3115702..3116580 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |