NZ_CP0431973079977..3111857

MGE detailed information

MGE type: Genomic_island        MGE length: 31881 bp
Accession: NZ_CP043197        Location: 3079977..3111857         Organism: Escherichia coli O16:H48 strain PG20180061       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FYA12_RS14950 () 3076161..3077429 - 1269 WP_000271909.1 L-2-hydroxyglutarate oxidase -
FYA12_RS14955 () 3077449..3078426 - 978 WP_000993126.1 carbon starvation induced protein CsiD -
FYA12_RS14960 () 3078762..3081014 - 2253 Protein_2894 hypothetical protein -
FYA12_RS14975 () 3082400..3083773 + 1374 Protein_2895 DUF5507 domain-containing protein -
FYA12_RS14980 () 3084137..3084346 + 210 WP_072097107.1 recombinase family protein -
FYA12_RS14985 () 3084501..3084620 + 120 WP_001120794.1 hypothetical protein -
FYA12_RS14990 () 3084685..3089265 + 4581 WP_010723187.1 putative autotransporter VF
FYA12_RS14995 () 3089629..3089958 - 330 WP_001094400.1 type IV toxin-antitoxin system toxin YpjF Toxin Detail
FYA12_RS15000 () 3089979..3090296 - 318 WP_000072690.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
FYA12_RS15005 () 3090334..3090534 - 201 WP_001395452.1 DUF987 domain-containing protein -
FYA12_RS15010 () 3090543..3091025 - 483 WP_001407480.1 RadC family protein -
FYA12_RS15015 () 3091034..3091492 - 459 WP_000211841.1 antirestriction protein -
FYA12_RS15020 () 3091595..3091818 - 224 Protein_2904 DUF905 domain-containing protein -
FYA12_RS15025 () 3092390..3094093 - 1704 WP_000896263.1 hypothetical protein -
FYA12_RS15030 () 3094235..3095244 + 1010 Protein_2906 arsenic transporter -
FYA12_RS15035 () 3095257..3095571 + 315 WP_000065803.1 arsenate reductase -
FYA12_RS15040 () 3095796..3096263 - 468 WP_000702495.1 hypothetical protein -
FYA12_RS15045 () 3096287..3096730 - 444 WP_000824222.1 hypothetical protein -
FYA12_RS15050 () 3096730..3096966 - 237 WP_001144029.1 hypothetical protein -
FYA12_RS15055 () 3097007..3097708 - 702 WP_000189409.1 WYL domain-containing protein -
FYA12_RS15060 () 3097925..3098746 - 822 WP_000197391.1 DUF945 domain-containing protein -
FYA12_RS15065 () 3098838..3099701 - 864 WP_000787597.1 GTPase family protein -
FYA12_RS15070 () 3100056..3100427 - 372 WP_000461704.1 type II toxin-antitoxin system antitoxin RnlB Antitoxin Detail
FYA12_RS15075 () 3100420..3101493 - 1074 WP_000155570.1 type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA Toxin Detail
FYA12_RS15080 () 3101635..3101898 + 264 WP_000502050.1 DUF1524 domain-containing protein -
FYA12_RS15085 () 3102258..3103874 + 1617 WP_000445380.1 anti-bacteriophage protein AbpA -
FYA12_RS15090 () 3103871..3106060 + 2190 WP_000136402.1 DEAD/DEAH box helicase -
FYA12_RS15095 () 3106238..3106864 - 627 WP_000220524.1 inovirus Gp2 family protein -
FYA12_RS15100 () 3107017..3108426 - 1410 WP_000481742.1 DUF3987 domain-containing protein -
FYA12_RS15105 () 3108555..3108767 - 213 WP_001065343.1 DNA-binding transcriptional activator AlpA -
FYA12_RS15110 () 3108811..3109767 + 957 WP_000510827.1 hypothetical protein -
FYA12_RS15115 () 3110011..3111252 - 1242 WP_000101723.1 Prophage integrase IntA ; Integrase Integrase
FYA12_RS15125 () 3112033..3112515 - 483 WP_000162574.1 SsrA-binding protein SmpB -
FYA12_RS15130 () 3112686..3113123 + 438 WP_001300750.1 type II toxin-antitoxin system toxin RatA -
FYA12_RS15135 () 3113113..3113403 + 291 WP_001117838.1 RnfH family protein -
FYA12_RS15140 () 3113465..3113806 - 342 WP_001203437.1 outer membrane protein assembly factor BamE -
FYA12_RS15145 () 3113955..3115616 - 1662 WP_000880910.1 DNA repair protein RecN -
FYA12_RS15150 () 3115702..3116580 - 879 WP_001059169.1 NAD(+) kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20085, TA20086 HG738867 3996347..4028227 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285030, TA285031 NZ_HG738867 3996347..4028227 0