MGE detailed information
MGE type: Genomic_island MGE length: 70670 bp
Accession: NZ_CP042969 Location: 4400527..4471196 Organism: Escherichia coli strain CFSAN061769 Replicon: chromosome
Accession: NZ_CP042969 Location: 4400527..4471196 Organism: Escherichia coli strain CFSAN061769 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA697_RS21175 (4396960) | 4396960..4398177 | - | 1218 | WP_085960558.1 | phosphoglycerate transport regulator PgtC | - |
| CA697_RS21180 (4398576) | 4398576..4399940 | + | 1365 | WP_000948757.1 | phosphoglycerate transporter PgtP | - |
| CA697_RS21185 (4399983) | 4399983..4400348 | + | 366 | WP_000639468.1 | hypothetical protein | - |
| CA697_RS21190 (4400440) | 4400440..4401668 | + | 1229 | WP_220528688.1 | IS3 family transposase IS2 | Transposase |
| CA697_RS21195 (4401678) | 4401678..4402771 | + | 1094 | Protein_4151 | IS3 family transposase ISEc31 | Transposase |
| CA697_RS21200 (4402770) | 4402770..4403138 | - | 369 | Protein_4152 | phosphoethanolamine transferase | - |
| CA697_RS21205 (4403313) | 4403313..4404017 | - | 705 | WP_000947354.1 | outer membrane beta-barrel protein | - |
| CA697_RS25325 (4404428) | 4404428..4404678 | + | 251 | Protein_4154 | integrase core domain-containing protein | - |
| CA697_RS21210 (4405160) | 4405160..4406452 | + | 1293 | WP_021552161.1 | MFS transporter | - |
| CA697_RS21215 (4406913) | 4406913..4408574 | - | 1662 | WP_116326920.1 | sulfatase-like hydrolase/transferase | - |
| CA697_RS21220 (4408627) | 4408627..4408824 | - | 198 | WP_001238009.1 | hypothetical protein | - |
| CA697_RS21225 (4409227) | 4409227..4410798 | - | 1572 | WP_001100175.1 | ATP--cob(I)alamin adenosyltransferase | - |
| CA697_RS21230 (4410845) | 4410845..4411924 | - | 1080 | WP_116326921.1 | chemotaxis protein | - |
| CA697_RS21235 (4411973) | 4411973..4412869 | - | 897 | WP_116326922.1 | WYL domain-containing protein | - |
| CA697_RS21240 (4413289) | 4413289..4414026 | - | 738 | WP_001389182.1 | OmpW family outer membrane protein | - |
| CA697_RS21245 (4414345) | 4414345..4414818 | + | 474 | WP_000335224.1 | H-NS family nucleoid-associated regulatory protein | - |
| CA697_RS21250 (4415370) | 4415370..4416377 | - | 1008 | WP_116326923.1 | LacI family DNA-binding transcriptional regulator | - |
| CA697_RS21255 (4416403) | 4416403..4417812 | - | 1410 | WP_097316431.1 | sucrose-6-phosphate hydrolase | - |
| CA697_RS21260 (4417812) | 4417812..4419182 | - | 1371 | WP_000344909.1 | sucrose-specific PTS transporter subunit IIBC | - |
| CA697_RS21265 (4419243) | 4419243..4420760 | - | 1518 | WP_000277208.1 | carbohydrate porin | - |
| CA697_RS21270 (4420928) | 4420928..4421848 | - | 921 | WP_000107666.1 | aminoimidazole riboside kinase | - |
| CA697_RS25330 (4422073) | 4422073..4422204 | + | 132 | WP_000139282.1 | hypothetical protein | - |
| CA697_RS21275 (4422574) | 4422574..4422726 | + | 153 | Protein_4169 | IS66 family transposase ISCro1 | Transposase |
| CA697_RS21280 (4422910) | 4422910..4424142 | - | 1233 | WP_000063698.1 | restriction endonuclease subunit S | - |
| CA697_RS21285 (4424135) | 4424135..4425769 | - | 1635 | WP_040101025.1 | class I SAM-dependent DNA methyltransferase | - |
| CA697_RS21290 (4425763) | 4425763..4428807 | - | 3045 | WP_001467606.1 | type I restriction endonuclease | - |
| CA697_RS21295 (4429054) | 4429054..4429222 | + | 169 | Protein_4173 | IS66 family transposase | - |
| CA697_RS21300 (4429841) | 4429841..4430164 | - | 324 | WP_024168789.1 | hypothetical protein | - |
| CA697_RS21305 (4430230) | 4430230..4430874 | - | 645 | WP_040101030.1 | hypothetical protein | - |
| CA697_RS21310 (4430895) | 4430895..4430996 | - | 102 | Protein_4176 | PerC family transcriptional regulator | - |
| CA697_RS21315 (4431091) | 4431091..4431315 | - | 225 | WP_157839783.1 | hypothetical protein | - |
| CA697_RS21320 (4431452) | 4431452..4431706 | - | 255 | WP_001222075.1 | hypothetical protein | - |
| CA697_RS21325 (4431703) | 4431703..4432488 | - | 786 | WP_001312355.1 | hypothetical protein | - |
| CA697_RS21330 (4432613) | 4432613..4434640 | - | 2028 | Protein_4180 | hemagglutinin repeat-containing protein | - |
| CA697_RS21335 (4434639) | 4434639..4435103 | + | 465 | Protein_4181 | IS21 family transposase ISEc12 | Transposase |
| CA697_RS25335 (4435174) | 4435174..4436616 | - | 1443 | WP_259401697.1 | tRNA nuclease CdiA-2 | VF |
| CA697_RS25340 (4437076) | 4437076..4437459 | - | 384 | Protein_4183 | tRNA nuclease CdiA-2 | VF |
| CA697_RS25345 (4437565) | 4437565..4438698 | - | 1134 | Protein_4184 | tRNA nuclease CdiA-2 | VF |
| CA697_RS21345 (4438765) | 4438765..4439292 | - | 528 | WP_012908820.1 | Leukotoxin-activating lysine-acyltransferase LtxC | VF |
| CA697_RS21350 (4439302) | 4439302..4440381 | - | 1080 | WP_224114789.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| CA697_RS25350 (4440415) | 4440415..4440954 | - | 540 | Protein_4187 | POTRA domain-containing protein | - |
| CA697_RS21355 (4441634) | 4441634..4441825 | + | 192 | WP_001287884.1 | DUF4222 domain-containing protein | - |
| CA697_RS21360 (4441878) | 4441878..4442111 | - | 234 | WP_000124171.1 | hypothetical protein | - |
| CA697_RS21365 (4442209) | 4442209..4442832 | - | 624 | WP_116326924.1 | DNA-binding protein | - |
| CA697_RS21370 (4442921) | 4442921..4443421 | - | 501 | WP_116326925.1 | hypothetical protein | - |
| CA697_RS21375 (4443695) | 4443695..4443931 | - | 237 | WP_029402533.1 | AlpA family transcriptional regulator | - |
| CA697_RS21380 (4444000) | 4444000..4444572 | - | 573 | WP_029402532.1 | hypothetical protein | - |
| CA697_RS21385 (4444832) | 4444832..4445398 | - | 567 | WP_029402530.1 | inovirus-type Gp2 protein | - |
| CA697_RS21390 (4447027) | 4447027..4448631 | - | 1605 | WP_097513135.1 | YfjI family protein | - |
| CA697_RS21395 (4449064) | 4449064..4449270 | + | 207 | WP_029402620.1 | IS110 family transposase ISSm3 | Transposase |
| CA697_RS21400 (4449272) | 4449272..4449382 | + | 111 | Protein_4197 | IS110 family transposase | - |
| CA697_RS21405 (4449562) | 4449562..4449717 | + | 156 | WP_157921230.1 | hypothetical protein | - |
| CA697_RS21410 (4449811) | 4449811..4450542 | - | 732 | WP_116326927.1 | inovirus Gp2 family protein | - |
| CA697_RS21415 (4452252) | 4452252..4453061 | + | 810 | WP_032216517.1 | hypothetical protein | - |
| CA697_RS21420 (4453058) | 4453058..4454002 | - | 945 | WP_032216516.1 | hypothetical protein | - |
| CA697_RS21425 (4454108) | 4454108..4454992 | + | 885 | WP_032216515.1 | 50S ribosome-binding GTPase | - |
| CA697_RS21430 (4455111) | 4455111..4455788 | + | 678 | WP_063091580.1 | hypothetical protein | - |
| CA697_RS21435 (4455794) | 4455794..4455946 | + | 153 | WP_001696589.1 | DUF905 family protein | - |
| CA697_RS21440 (4456047) | 4456047..4456865 | + | 819 | WP_001234688.1 | DUF932 domain-containing protein | - |
| CA697_RS21445 (4456947) | 4456947..4457426 | + | 480 | WP_000860074.1 | antirestriction protein | - |
| CA697_RS21450 (4457442) | 4457442..4457918 | + | 477 | WP_001366830.1 | RadC family protein | - |
| CA697_RS21455 (4457981) | 4457981..4458202 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| CA697_RS21460 (4458221) | 4458221..4458865 | + | 645 | WP_045146861.1 | hypothetical protein | - |
| CA697_RS21465 (4458915) | 4458915..4459283 | + | 369 | WP_063112944.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CA697_RS21470 (4459373) | 4459373..4459750 | + | 378 | WP_057109034.1 | TA system toxin CbtA family protein | Toxin Detail |
| CA697_RS21475 (4459747) | 4459747..4459896 | + | 150 | Protein_4212 | DUF5983 family protein | - |
| CA697_RS21480 (4459972) | 4459972..4460169 | + | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| CA697_RS21485 (4460254) | 4460254..4461096 | + | 843 | WP_001529559.1 | DUF4942 domain-containing protein | - |
| CA697_RS21490 (4461845) | 4461845..4463383 | + | 1539 | WP_001187171.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CA697_RS21495 (4463749) | 4463749..4465083 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CA697_RS21500 (4465163) | 4465163..4467310 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CA697_RS21505 (4467369) | 4467369..4468826 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| CA697_RS21510 (4469063) | 4469063..4470580 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CA697_RS21515 (4470699) | 4470699..4470872 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CA697_RS21520 (4470900) | 4470900..4471196 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CA697_RS21525 (4471423) | 4471423..4471695 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| CA697_RS21530 (4471707) | 4471707..4471937 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| CA697_RS21535 (4472118) | 4472118..4473749 | + | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| CA697_RS21540 (4473746) | 4473746..4474465 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|