MGE detailed information
MGE type: Conjugative plasmid MGE length: 132874 bp
Accession: NZ_CP042879 Location: 1..132874 Organism: Escherichia coli strain NMBU_W05E18 Replicon: plasmid pNMBU-W05E18_01
Accession: NZ_CP042879 Location: 1..132874 Organism: Escherichia coli strain NMBU_W05E18 Replicon: plasmid pNMBU-W05E18_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVA71_RS25505 () | 1..978 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| FVA71_RS25510 () | 1221..1961 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| FVA71_RS25515 () | 2082..2270 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| FVA71_RS25520 () | 2637..3806 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| FVA71_RS25525 () | 4032..4207 | - | 176 | Protein_4 | IS3 family transposase | - |
| FVA71_RS25530 () | 4653..4925 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| FVA71_RS25535 () | 5447..5881 | - | 435 | Protein_6 | IS3 family transposase IS2 | Transposase |
| FVA71_RS25540 () | 5968..6436 | - | 469 | Protein_7 | IS3 family transposase IS629 | Transposase |
| FVA71_RS25545 () | 6526..7097 | - | 572 | Protein_8 | maturase | - |
| FVA71_RS25550 () | 7112..7564 | - | 453 | WP_173009539.1 | reverse transcriptase/maturase family protein | - |
| FVA71_RS25555 () | 7561..8027 | - | 467 | Protein_10 | reverse transcriptase | - |
| FVA71_RS25560 () | 8071..8328 | - | 258 | WP_173009540.1 | hypothetical protein | - |
| FVA71_RS25565 () | 8693..9428 | - | 736 | Protein_12 | IS3 family transposase IS1203 | Transposase |
| FVA71_RS25570 () | 9530..9790 | + | 261 | WP_000371883.1 | hypothetical protein | - |
| FVA71_RS25575 () | 9787..10296 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| FVA71_RS25580 () | 10316..10663 | - | 348 | WP_000142452.1 | hypothetical protein | - |
| FVA71_RS25585 () | 10792..11010 | + | 219 | WP_001336934.1 | hypothetical protein | - |
| FVA71_RS25590 () | 12580..13266 | + | 687 | Protein_17 | replication initiation protein | - |
| FVA71_RS25595 () | 13598..14473 | + | 876 | WP_001537591.1 | ChaN family lipoprotein | - |
| FVA71_RS25600 () | 14481..15257 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| FVA71_RS25605 () | 15426..17687 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| FVA71_RS25610 () | 17756..18931 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| FVA71_RS25615 () | 19454..19759 | - | 306 | Protein_22 | IS91 family transposase ISSbo1 | Transposase |
| FVA71_RS25620 () | 19785..20362 | + | 578 | Protein_23 | IS3 family transposase IS629 | Transposase |
| FVA71_RS25625 () | 20253..21008 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| FVA71_RS25630 () | 21005..22504 | - | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| FVA71_RS25635 () | 22590..22940 | + | 351 | Protein_26 | IS3 family transposase | - |
| FVA71_RS25640 () | 23610..24078 | + | 469 | Protein_27 | reverse transcriptase | - |
| FVA71_RS25645 () | 24075..24530 | + | 456 | WP_173009541.1 | reverse transcriptase/maturase family protein | - |
| FVA71_RS25650 () | 24545..25115 | + | 571 | Protein_29 | maturase | - |
| FVA71_RS25655 () | 25343..26368 | - | 1026 | Protein_30 | IS3 family transposase | - |
| FVA71_RS25660 () | 26484..26888 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| FVA71_RS25665 () | 26885..27232 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| FVA71_RS25670 () | 27281..28819 | + | 1539 | WP_000099150.1 | IS66 family transposase ISEc22 | Transposase |
| FVA71_RS25675 () | 28858..29007 | + | 150 | Protein_34 | IS3 family transposase | - |
| FVA71_RS25680 () | 29123..29971 | + | 849 | WP_001057995.1 | 3'-5' exonuclease | - |
| FVA71_RS25685 () | 30088..30570 | + | 483 | WP_001337004.1 | hypothetical protein | - |
| FVA71_RS25690 () | 30780..31040 | + | 261 | WP_001545316.1 | hypothetical protein | - |
| FVA71_RS25695 () | 31147..31410 | + | 264 | WP_001089474.1 | hypothetical protein | - |
| FVA71_RS25700 () | 31400..31699 | + | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FVA71_RS25705 () | 32057..32332 | + | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| FVA71_RS25710 () | 32410..33597 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| FVA71_RS25715 () | 33654..34415 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| FVA71_RS25720 () | 34415..35452 | - | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| FVA71_RS25725 () | 35452..36450 | - | 999 | WP_000756334.1 | ABC transporter substrate-binding protein | - |
| FVA71_RS25730 () | 36600..36713 | - | 114 | Protein_45 | transposase | - |
| FVA71_RS25735 () | 36706..37211 | - | 506 | Protein_46 | IS3 family transposase IS3H | Transposase |
| FVA71_RS25740 () | 37536..38327 | + | 792 | WP_000456855.1 | Virulence regulon transcriptional activator VirF | VF |
| FVA71_RS25745 () | 38532..38948 | - | 417 | WP_000466682.1 | SdiA-regulated domain-containing protein | - |
| FVA71_RS25750 () | 39160..40388 | + | 1229 | WP_106378881.1 | IS3 family transposase IS2 | Transposase |
| FVA71_RS25755 () | 40686..41171 | - | 486 | WP_079414660.1 | hypothetical protein | - |
| FVA71_RS25760 () | 41279..41701 | - | 423 | WP_000243157.1 | Protein AfaD | VF |
| FVA71_RS25765 () | 41717..44233 | - | 2517 | WP_162929852.1 | F1 capsule-anchoring protein | VF |
| FVA71_RS25770 () | 44296..45048 | - | 753 | WP_000471454.1 | Chaperone protein caf1M | VF |
| FVA71_RS25775 () | 45271..45483 | + | 213 | WP_173009542.1 | reverse transcriptase | - |
| FVA71_RS25780 () | 45567..46046 | + | 480 | Protein_55 | IS3 family transposase IS629 | Transposase |
| FVA71_RS25785 () | 46049..46618 | - | 570 | WP_001336919.1 | Serine protease EspC | VF |
| FVA71_RS25790 () | 46720..47699 | + | 980 | Protein_57 | IS5 family transposase ISKpn26 | Transposase |
| FVA71_RS25795 () | 47849..48481 | - | 633 | Protein_58 | histidine-type phosphatase | - |
| FVA71_RS25800 () | 48603..49088 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| FVA71_RS25805 () | 49113..49598 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| FVA71_RS25810 () | 49585..50280 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| FVA71_RS25815 () | 50285..51415 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| FVA71_RS25820 () | 51405..52688 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| FVA71_RS25825 () | 52691..54070 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| FVA71_RS25830 () | 54174..54701 | - | 528 | WP_000178050.1 | iron transporter | - |
| FVA71_RS25835 () | 54742..56628 | - | 1887 | WP_001332815.1 | FTR1 family iron permease | - |
| FVA71_RS25840 () | 56975..57790 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| FVA71_RS25845 () | 58123..58827 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FVA71_RS25850 () | 58881..59048 | + | 168 | Protein_69 | IS110 family transposase | - |
| FVA71_RS25855 () | 59426..60898 | - | 1473 | WP_000621194.1 | sensor histidine kinase | - |
| FVA71_RS25860 () | 60895..61617 | - | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| FVA71_RS25865 () | 61759..62358 | + | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| FVA71_RS25870 () | 62369..63139 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| FVA71_RS25875 () | 63169..63417 | + | 249 | WP_000738203.1 | hypothetical protein | - |
| FVA71_RS25880 () | 63567..63665 | - | 99 | WP_137491101.1 | transposase | - |
| FVA71_RS25885 () | 63858..64166 | + | 309 | Protein_76 | IS91 family transposase ISSbo1 | Transposase |
| FVA71_RS25890 () | 64281..64493 | - | 213 | WP_001336932.1 | hypothetical protein | - |
| FVA71_RS25895 () | 65194..66051 | - | 858 | WP_001537577.1 | incFII family plasmid replication initiator RepA | - |
| FVA71_RS25900 () | 66044..66118 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| FVA71_RS25905 () | 66352..66609 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| FVA71_RS25910 () | 66894..67043 | - | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 67091..67147 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 67091..67147 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 67091..67147 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 67091..67147 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| FVA71_RS25915 () | 67242..67679 | - | 438 | WP_000872609.1 | hypothetical protein | - |
| FVA71_RS25920 () | 67832..68215 | - | 384 | WP_001109264.1 | hypothetical protein | - |
| FVA71_RS25925 () | 68318..68779 | - | 462 | WP_000760080.1 | thermonuclease family protein | - |
| FVA71_RS25930 () | 69887..70444 | - | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| FVA71_RS25935 () | 70499..71245 | - | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| FVA71_RS25940 () | 71265..73769 | - | 2505 | Protein_87 | Multifunctional conjugation protein TraI | Relaxase |
| FVA71_RS25945 () | 73831..74628 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| FVA71_RS25950 () | 74628..75800 | - | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| FVA71_RS25955 () | 75902..78670 | - | 2769 | Protein_90 | Multifunctional conjugation protein TraI | Relaxase |
| FVA71_RS25960 () | 78670..80913 | - | 2244 | WP_033550317.1 | type IV conjugative transfer system coupling protein TraD | - |
| FVA71_RS25965 () | 80964..81506 | - | 543 | WP_077784345.1 | hypothetical protein | - |
| FVA71_RS25970 () | 81702..83273 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| FVA71_RS25975 () | 83293..83640 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FVA71_RS25980 () | 83640..84317 | - | 678 | WP_032147602.1 | IS66 family transposase ISCro1 | Transposase |
| FVA71_RS25985 () | 84611..85342 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| FVA71_RS25990 () | 85374..85871 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| FVA71_RS25995 () | 85890..88709 | - | 2820 | WP_001537571.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FVA71_RS26000 () | 88706..90079 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| FVA71_RS26005 () | 90066..90491 | - | 426 | WP_001336804.1 | F-type conjugal transfer protein TrbF | - |
| FVA71_RS26010 () | 90412..90786 | - | 375 | WP_071586940.1 | P-type conjugative transfer protein TrbJ | - |
| FVA71_RS26015 () | 90716..91261 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FVA71_RS26020 () | 91248..91532 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FVA71_RS26025 () | 91613..91873 | + | 261 | WP_000736412.1 | hypothetical protein | - |
| FVA71_RS26030 () | 91929..92270 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| FVA71_RS26035 () | 92284..93027 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FVA71_RS26040 () | 93020..93277 | - | 258 | WP_000864310.1 | conjugal transfer protein TrbE | - |
| FVA71_RS26045 () | 93304..95154 | - | 1851 | WP_000826177.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FVA71_RS26050 () | 95151..95573 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| FVA71_RS26055 () | 95598..95969 | - | 372 | WP_000174465.1 | hypothetical protein | - |
| FVA71_RS26060 () | 95966..96604 | - | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FVA71_RS26065 () | 96631..97149 | - | 519 | WP_000009088.1 | hypothetical protein | - |
| FVA71_RS26070 () | 97212..97520 | - | 309 | WP_000412445.1 | hypothetical protein | - |
| FVA71_RS26075 () | 97547..98539 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| FVA71_RS26080 () | 98536..99168 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FVA71_RS26085 () | 99165..99551 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| FVA71_RS26090 () | 99548..102178 | - | 2631 | WP_000069771.1 | type IV secretion system protein TraC | - |
| FVA71_RS26095 () | 102545..102763 | - | 219 | WP_000556746.1 | hypothetical protein | - |
| FVA71_RS26100 () | 102843..103316 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| FVA71_RS26105 () | 103309..103722 | - | 414 | WP_000549574.1 | hypothetical protein | - |
| FVA71_RS26110 () | 103715..103936 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| FVA71_RS26115 () | 104071..104586 | - | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FVA71_RS26120 () | 104586..104936 | - | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| FVA71_RS26125 () | 104890..105477 | - | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| FVA71_RS26130 () | 105446..106897 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| FVA71_RS26135 () | 106897..107625 | - | 729 | WP_001230767.1 | type-F conjugative transfer system secretin TraK | - |
| FVA71_RS26140 () | 107612..108178 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| FVA71_RS26145 () | 108200..108511 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| FVA71_RS26150 () | 108526..108885 | - | 360 | WP_001099001.1 | type IV conjugative transfer system pilin TraA | - |
| FVA71_RS26155 () | 108918..109313 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| FVA71_RS26160 () | 109412..110101 | - | 690 | WP_000283387.1 | conjugal transfer transcriptional regulator TraJ | - |
| FVA71_RS26165 () | 110288..110671 | - | 384 | WP_001151538.1 | relaxosome protein TraM | - |
| FVA71_RS26170 () | 110992..111594 | + | 603 | Protein_133 | hypothetical protein | VF |
| FVA71_RS26175 () | 111891..112712 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| FVA71_RS26180 () | 112822..113118 | - | 297 | WP_001545326.1 | hypothetical protein | - |
| FVA71_RS26185 () | 113418..113714 | + | 297 | Protein_136 | hypothetical protein | - |
| FVA71_RS26190 () | 114015..114173 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 114217..114441 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 114217..114441 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 114217..114441 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 114217..114441 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| FVA71_RS26195 () | 114253..114432 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| FVA71_RS26200 () | 114453..115172 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| FVA71_RS26205 () | 115169..115603 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| FVA71_RS26210 () | 115672..117636 | - | 1965 | WP_001537566.1 | ParB/RepB/Spo0J family partition protein | - |
| FVA71_RS26215 () | 117697..117930 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| FVA71_RS26220 () | 117988..118515 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| FVA71_RS26225 () | 118817..119254 | + | 438 | WP_024185955.1 | hypothetical protein | - |
| FVA71_RS26230 () | 119340..119678 | - | 339 | WP_072198834.1 | class I SAM-dependent methyltransferase | - |
| FVA71_RS26235 () | 119949..121310 | - | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| FVA71_RS26240 () | 121362..121592 | - | 231 | WP_001537563.1 | hypothetical protein | - |
| FVA71_RS26245 () | 122110..122581 | + | 472 | Protein_148 | hypothetical protein | - |
| FVA71_RS26250 () | 122560..122751 | - | 192 | WP_001027049.1 | hypothetical protein | - |
| FVA71_RS26255 () | 122751..123170 | - | 420 | WP_000271761.1 | DUF1380 family protein | - |
| FVA71_RS26260 () | 123217..123519 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| FVA71_RS26265 () | 123615..124183 | - | 569 | Protein_152 | DUF1472 domain-containing protein | - |
| FVA71_RS26270 () | 124607..124871 | - | 265 | Protein_153 | hypothetical protein | - |
| FVA71_RS26275 () | 124871..125305 | - | 435 | WP_000274451.1 | DUF1380 family protein | - |
| FVA71_RS26280 () | 125319..125540 | - | 222 | WP_001104892.1 | hypothetical protein | - |
| FVA71_RS26285 () | 125541..126224 | - | 684 | WP_000086171.1 | DNA methylase | - |
| FVA71_RS26290 () | 126300..126611 | - | 312 | WP_001309256.1 | hypothetical protein | - |
| FVA71_RS26295 () | 126675..127034 | - | 360 | WP_001336695.1 | DUF1281 domain-containing protein | - |
| FVA71_RS26300 () | 127041..127184 | - | 144 | WP_000270807.1 | DUF1281 domain-containing protein | - |
| FVA71_RS26305 () | 127351..128127 | - | 777 | Protein_160 | hypothetical protein | - |
| FVA71_RS26310 () | 128361..129323 | - | 963 | WP_000756328.1 | ParB/RepB/Spo0J family partition protein | - |
| FVA71_RS26315 () | 129320..130525 | - | 1206 | WP_000817635.1 | Plasmid partition protein A | VF |
| FVA71_RS26320 () | 131283..131534 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| FVA71_RS26325 () | 131531..131818 | + | 288 | WP_001270422.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FVA71_RS26330 () | 131820..132231 | + | 412 | Protein_165 | DDE-type integrase/transposase/recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|