MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 164980 bp
Accession: NZ_CP042466 Location: 1160..166139 Organism: Geobacter sp. FeAm09 Replicon: chromosome
Accession: NZ_CP042466 Location: 1160..166139 Organism: Geobacter sp. FeAm09 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FO488_RS00005 () | 556..997 | + | 442 | Protein_0 | hypothetical protein | - |
| FO488_RS00010 () | 1036..1788 | + | 753 | Protein_1 | ATP-binding cassette domain-containing protein | - |
| FO488_RS00015 () | 1910..2828 | + | 919 | Protein_2 | DmsE family decaheme c-type cytochrome | - |
| FO488_RS00020 () | 2832..3071 | + | 240 | WP_149208640.1 | hypothetical protein | - |
| FO488_RS00025 () | 3629..4477 | + | 849 | WP_149208641.1 | MtrB/PioB family outer membrane beta-barrel protein | - |
| FO488_RS00030 () | 4465..4839 | + | 375 | WP_149208642.1 | hypothetical protein | - |
| FO488_RS00035 () | 4930..5880 | + | 951 | WP_168205803.1 | ABC transporter substrate-binding protein | - |
| FO488_RS00040 () | 5945..6331 | + | 387 | WP_149208643.1 | Regulator of RpoS | VF |
| FO488_RS00045 () | 6495..7346 | + | 852 | WP_149208644.1 | putative lipoprotein YiaD | VF |
| FO488_RS00050 () | 7529..8197 | + | 669 | WP_149212026.1 | Smr/MutS family protein | - |
| FO488_RS00055 () | 8296..8997 | - | 702 | WP_149208645.1 | cytidylate kinase-like family protein | - |
| FO488_RS00060 () | 9177..9467 | + | 291 | WP_149208646.1 | Dabb family protein | - |
| FO488_RS00065 () | 9728..11323 | + | 1596 | WP_149208647.1 | acetyl-CoA hydrolase | - |
| FO488_RS00070 () | 11492..12196 | + | 705 | WP_149208648.1 | DUF4388 domain-containing protein | - |
| FO488_RS00075 () | 12209..12904 | + | 696 | WP_149208649.1 | roadblock/LC7 domain-containing protein | - |
| FO488_RS00080 () | 13034..13933 | - | 900 | WP_149208650.1 | Tyrosine recombinase XerC | VF |
| FO488_RS00085 () | 14364..14786 | - | 423 | WP_149208651.1 | hypothetical protein | - |
| FO488_RS00090 () | 14783..16615 | - | 1833 | WP_149208652.1 | bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase | - |
| FO488_RS00095 () | 16722..17330 | + | 609 | WP_149208653.1 | DedA family protein | - |
| FO488_RS00100 () | 17371..18171 | + | 801 | WP_149208654.1 | peptidoglycan editing factor PgeF | - |
| FO488_RS00105 () | 18334..19389 | + | 1056 | WP_149208655.1 | YifB family Mg chelatase-like AAA ATPase | - |
| FO488_RS00110 () | 19316..20863 | - | 1548 | WP_149208656.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| FO488_RS00115 () | 21016..21246 | + | 231 | WP_149208657.1 | hypothetical protein | - |
| FO488_RS00120 () | 21243..21803 | - | 561 | WP_149208658.1 | helix-turn-helix domain-containing protein | - |
| FO488_RS00125 () | 21916..22137 | + | 222 | WP_149208659.1 | hypothetical protein | - |
| FO488_RS00130 () | 22229..22945 | + | 717 | WP_149208660.1 | hypothetical protein | - |
| FO488_RS19220 () | 22985..23137 | + | 153 | WP_168205804.1 | hypothetical protein | - |
| FO488_RS00135 () | 23124..23435 | + | 312 | WP_149208661.1 | hypothetical protein | - |
| FO488_RS00140 () | 23432..24295 | + | 864 | WP_168205805.1 | TrfA family protein | - |
| FO488_RS00145 () | 24795..25373 | + | 579 | WP_149208663.1 | hypothetical protein | - |
| FO488_RS00150 () | 25375..26301 | + | 927 | WP_149208664.1 | ParM/StbA family protein | - |
| FO488_RS00155 () | 26307..26621 | + | 315 | WP_149208665.1 | hypothetical protein | - |
| FO488_RS00160 () | 26785..27075 | + | 291 | WP_149208666.1 | helix-turn-helix transcriptional regulator | - |
| FO488_RS19225 () | 27158..27319 | + | 162 | WP_168205806.1 | hypothetical protein | - |
| FO488_RS00165 () | 27714..28250 | + | 537 | WP_149208667.1 | hypothetical protein | VF |
| FO488_RS00170 () | 28275..28994 | + | 720 | WP_149208668.1 | DUF2786 domain-containing protein | - |
| FO488_RS00175 () | 29038..29649 | + | 612 | WP_149208669.1 | hypothetical protein | - |
| FO488_RS00180 () | 29650..30282 | + | 633 | WP_149208670.1 | hypothetical protein | - |
| FO488_RS00185 () | 30284..30658 | + | 375 | WP_149208671.1 | TSCPD domain-containing protein | - |
| FO488_RS00190 () | 30648..31529 | + | 882 | WP_149208672.1 | radical SAM protein | - |
| FO488_RS00195 () | 31670..32086 | - | 417 | WP_149208673.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| FO488_RS00200 () | 32100..32288 | - | 189 | WP_149208674.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| FO488_RS00205 () | 32923..35784 | + | 2862 | WP_149208675.1 | relaxase domain-containing protein | - |
| FO488_RS00210 () | 35804..36037 | + | 234 | WP_149208676.1 | hypothetical protein | - |
| FO488_RS00215 () | 36027..36257 | + | 231 | WP_149208677.1 | hypothetical protein | - |
| FO488_RS00220 () | 36564..37130 | + | 567 | WP_149208678.1 | hypothetical protein | - |
| FO488_RS00225 () | 37191..37508 | + | 318 | WP_149208679.1 | ribbon-helix-helix protein, CopG family | - |
| FO488_RS00230 () | 37505..38053 | + | 549 | WP_149208680.1 | hypothetical protein | - |
| FO488_RS00235 () | 38069..39946 | + | 1878 | WP_149208681.1 | type IV secretion system DNA-binding domain-containing protein | - |
| FO488_RS00240 () | 40084..40980 | + | 897 | WP_149208682.1 | hypothetical protein | - |
| FO488_RS00245 () | 40985..41461 | + | 477 | WP_205743392.1 | transposase | - |
| FO488_RS00250 () | 41554..42074 | + | 521 | Protein_51 | Phospholipase D | VF |
| FO488_RS00255 () | 42435..42629 | + | 195 | WP_149208683.1 | DUF3775 domain-containing protein | - |
| FO488_RS00260 () | 42761..43693 | + | 933 | WP_149208684.1 | hypothetical protein | - |
| FO488_RS00265 () | 43798..44076 | + | 279 | WP_149208685.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FO488_RS00270 () | 44093..44389 | + | 297 | WP_149208686.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| FO488_RS00275 () | 44507..45202 | + | 696 | WP_149208687.1 | hypothetical protein | - |
| FO488_RS00280 () | 45642..49109 | - | 3468 | WP_149208688.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FO488_RS00285 () | 49119..50606 | - | 1488 | WP_168205807.1 | conjugal transfer protein TraH | - |
| FO488_RS00290 () | 50594..51301 | - | 708 | WP_149208690.1 | hypothetical protein | - |
| FO488_RS00295 () | 51304..52041 | - | 738 | Protein_60 | conjugal transfer protein TraF | - |
| FO488_RS00300 () | 52205..52753 | - | 549 | WP_149208692.1 | S26 family signal peptidase | - |
| FO488_RS00305 () | 52722..53072 | - | 351 | WP_149208693.1 | hypothetical protein | - |
| FO488_RS00310 () | 53062..53373 | - | 312 | WP_149208694.1 | hypothetical protein | - |
| FO488_RS00315 () | 53355..53627 | - | 273 | WP_168205808.1 | hypothetical protein | - |
| FO488_RS00320 () | 53681..54769 | - | 1089 | WP_168205809.1 | hypothetical protein | - |
| FO488_RS00325 () | 54756..55373 | - | 618 | WP_168205810.1 | HD domain-containing protein | - |
| FO488_RS00330 () | 55381..56193 | - | 813 | WP_205743313.1 | hypothetical protein | - |
| FO488_RS00335 () | 56196..57188 | - | 993 | WP_149208699.1 | TraU family protein | - |
| FO488_RS00340 () | 57166..57777 | - | 612 | WP_149208700.1 | hypothetical protein | - |
| FO488_RS19230 () | 57774..58892 | - | 1119 | WP_168205811.1 | conjugal transfer protein TraN | - |
| FO488_RS00350 () | 61382..63424 | - | 2043 | WP_149208702.1 | hypothetical protein | - |
| FO488_RS00355 () | 63396..65963 | - | 2568 | WP_168205812.1 | TraC family protein | - |
| FO488_RS00360 () | 65968..66429 | - | 462 | WP_149208704.1 | TraV family lipoprotein | - |
| FO488_RS00365 () | 66392..67705 | - | 1314 | WP_149208705.1 | TraB/VirB10 family protein | - |
| FO488_RS00370 () | 67695..68705 | - | 1011 | WP_149208706.1 | type-F conjugative transfer system secretin TraK | - |
| FO488_RS00375 () | 68695..69318 | - | 624 | WP_149208707.1 | hypothetical protein | - |
| FO488_RS00380 () | 69331..69609 | - | 279 | WP_149208708.1 | hypothetical protein | - |
| FO488_RS00385 () | 69676..69981 | - | 306 | WP_149208709.1 | hypothetical protein | - |
| FO488_RS00390 () | 69984..70697 | - | 714 | WP_149208710.1 | DsbC family protein | - |
| FO488_RS19565 () | 70694..71026 | - | 333 | WP_205743314.1 | Outer membrane protein A | VF |
| FO488_RS00400 () | 71320..71637 | - | 318 | WP_149208712.1 | hypothetical protein | - |
| FO488_RS19235 () | 71634..71810 | - | 177 | WP_168205813.1 | hypothetical protein | - |
| FO488_RS00405 () | 71807..72592 | - | 786 | WP_205743315.1 | hypothetical protein | - |
| FO488_RS00410 () | 72613..72846 | - | 234 | WP_149208714.1 | hypothetical protein | - |
| FO488_RS00415 () | 73362..73820 | - | 459 | WP_149208715.1 | helix-turn-helix domain-containing protein | - |
| FO488_RS00420 () | 73742..74302 | + | 561 | WP_149208716.1 | YifB family Mg chelatase-like AAA ATPase | - |
| FO488_RS00425 () | 74488..75840 | + | 1353 | WP_149208717.1 | cytochrome C | - |
| FO488_RS00430 () | 75871..77061 | + | 1191 | WP_168205814.1 | hypothetical protein | - |
| FO488_RS00435 () | 77121..77651 | + | 531 | WP_149208719.1 | cytochrome c3 family protein | - |
| FO488_RS00440 () | 77700..79625 | + | 1926 | WP_149208720.1 | hypothetical protein | - |
| FO488_RS00445 () | 79645..80709 | + | 1065 | WP_149208721.1 | 6-bladed beta-propeller | - |
| FO488_RS00450 () | 80714..81505 | + | 792 | WP_149208722.1 | cytochrome c3 family protein | - |
| FO488_RS00455 () | 81529..82527 | + | 999 | WP_149208723.1 | cytochrome c3 family protein | - |
| FO488_RS00460 () | 83057..83845 | + | 789 | WP_149208724.1 | cytochrome C | - |
| FO488_RS00465 () | 83897..88108 | + | 4212 | WP_149208725.1 | hypothetical protein | - |
| FO488_RS00470 () | 88579..88896 | + | 318 | WP_149208726.1 | hypothetical protein | - |
| FO488_RS00475 () | 88906..90777 | + | 1872 | WP_149208727.1 | tetratricopeptide repeat protein | - |
| FO488_RS00480 () | 90829..91599 | - | 771 | WP_149208728.1 | Undecaprenyl-phosphate mannosyltransferase | VF |
| FO488_RS00485 () | 91657..93534 | - | 1878 | WP_149208729.1 | tetratricopeptide repeat protein | - |
| FO488_RS00490 () | 93531..95207 | - | 1677 | WP_168205816.1 | tetratricopeptide repeat protein | - |
| FO488_RS00495 () | 95221..96843 | - | 1623 | WP_149208731.1 | tetratricopeptide repeat protein | - |
| FO488_RS00500 () | 96900..97568 | - | 669 | WP_149208732.1 | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | VF |
| FO488_RS00505 () | 97629..98423 | - | 795 | WP_205743316.1 | glycosyltransferase | - |
| FO488_RS00510 () | 98473..99651 | - | 1179 | WP_149208734.1 | glycosyltransferase family 2 protein | - |
| FO488_RS00515 () | 100110..101300 | - | 1191 | WP_149208735.1 | glycosyltransferase family 4 protein | - |
| FO488_RS00520 () | 101455..102459 | - | 1005 | WP_205743317.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase | VF |
| FO488_RS00525 () | 102501..103613 | - | 1113 | WP_149208736.1 | glycosyltransferase | - |
| FO488_RS00530 () | 103613..104569 | - | 957 | WP_149208737.1 | SDR family oxidoreductase | - |
| FO488_RS00535 () | 104566..105534 | - | 969 | WP_149208738.1 | NAD-dependent epimerase/dehydratase family protein | - |
| FO488_RS00540 () | 105531..106508 | - | 978 | WP_149208739.1 | NAD-dependent epimerase/dehydratase family protein | - |
| FO488_RS00545 () | 106546..107004 | - | 459 | WP_149208740.1 | dTDP-4-dehydrorhamnose 3,5-epimerase family protein | - |
| FO488_RS00550 () | 107059..108279 | - | 1221 | WP_149208741.1 | class I SAM-dependent methyltransferase | - |
| FO488_RS00555 () | 108344..109675 | - | 1332 | WP_149208742.1 | flippase | - |
| FO488_RS00560 () | 109790..110776 | - | 987 | WP_149208743.1 | hypothetical protein | - |
| FO488_RS00565 () | 110847..111608 | - | 762 | WP_149208744.1 | hypothetical protein | - |
| FO488_RS00570 () | 111888..112196 | + | 309 | WP_149208745.1 | 50S ribosomal protein L21 | - |
| FO488_RS00575 () | 112227..112481 | + | 255 | WP_149208746.1 | 50S ribosomal protein L27 | - |
| FO488_RS00580 () | 112683..114809 | + | 2127 | WP_168205817.1 | Methyl-accepting chemotaxis protein PctC | VF |
| FO488_RS00585 () | 115183..117648 | + | 2466 | WP_149208747.1 | carboxypeptidase-like regulatory domain-containing protein | - |
| FO488_RS00590 () | 117745..119826 | + | 2082 | WP_168205818.1 | hypothetical protein | - |
| FO488_RS00595 () | 119858..121051 | + | 1194 | WP_149208749.1 | hypothetical protein | - |
| FO488_RS00600 () | 121186..122490 | - | 1305 | WP_149208750.1 | insulinase family protein | - |
| FO488_RS00605 () | 122487..122906 | - | 420 | WP_149208751.1 | HIT family protein | - |
| FO488_RS00610 () | 122926..123672 | - | 747 | WP_149208752.1 | acyl-ACP thioesterase | - |
| FO488_RS00615 () | 123679..124851 | - | 1173 | WP_168206112.1 | ABC transporter permease | - |
| FO488_RS00620 () | 124939..125628 | - | 690 | WP_149208754.1 | putative ABC transporter ATP-binding protein YknY | VF |
| FO488_RS00625 () | 125632..126837 | - | 1206 | WP_149208755.1 | efflux RND transporter periplasmic adaptor subunit | - |
| FO488_RS00630 () | 127132..127779 | - | 648 | WP_205743318.1 | hypothetical protein | - |
| FO488_RS00635 () | 128113..128892 | + | 780 | WP_149208757.1 | precorrin-4 C(11)-methyltransferase | - |
| FO488_RS00640 () | 128894..129970 | + | 1077 | WP_149208758.1 | cobalt-precorrin 5A hydrolase | - |
| FO488_RS00645 () | 129993..130961 | + | 969 | WP_149212028.1 | D-threonate 4-phosphate dehydrogenase | VF |
| FO488_RS00650 () | 131025..131309 | - | 285 | WP_149208759.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| FO488_RS00655 () | 131375..131791 | - | 417 | WP_149208760.1 | bacteriohemerythrin | - |
| FO488_RS00660 () | 131806..133233 | - | 1428 | WP_149208761.1 | insulinase family protein | - |
| FO488_RS00665 () | 133230..134717 | - | 1488 | WP_149208762.1 | insulinase family protein | - |
| FO488_RS00670 () | 134807..135889 | - | 1083 | WP_149208763.1 | MCE family protein | - |
| FO488_RS00675 () | 136048..136776 | - | 729 | WP_205743393.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| FO488_RS00680 () | 136797..137267 | - | 471 | WP_149208765.1 | EVE domain-containing protein | - |
| FO488_RS00685 () | 137275..138048 | - | 774 | WP_149208766.1 | ABC transporter permease | - |
| FO488_RS00690 () | 138245..140082 | - | 1838 | Protein_140 | LON peptidase substrate-binding domain-containing protein | - |
| FO488_RS00695 () | 140277..140810 | - | 534 | WP_149212029.1 | hypothetical protein | - |
| FO488_RS00700 () | 140859..141422 | - | 564 | WP_149208767.1 | cupin domain-containing protein | - |
| FO488_RS00705 () | 141588..143150 | + | 1563 | WP_149208768.1 | MFS transporter | - |
| FO488_RS00710 () | 143158..144063 | + | 906 | WP_149208769.1 | NAD(P)H-binding protein | - |
| FO488_RS00715 () | 144150..144803 | + | 654 | WP_149208770.1 | isoprenoid biosynthesis glyoxalase ElbB | - |
| FO488_RS00720 () | 144931..146199 | + | 1269 | WP_149208771.1 | M48 family metallopeptidase | - |
| FO488_RS00725 () | 146326..146895 | + | 570 | WP_149208772.1 | TetR/AcrR family transcriptional regulator | - |
| FO488_RS00730 () | 147116..148324 | + | 1209 | WP_149208773.1 | Multidrug efflux pump subunit AcrA | VF |
| FO488_RS00735 () | 148337..151507 | + | 3171 | WP_149208774.1 | Multidrug efflux pump subunit AcrB | VF |
| FO488_RS00740 () | 151509..152939 | + | 1431 | WP_149208775.1 | Outer membrane protein OprM | VF |
| FO488_RS00745 () | 153130..154839 | + | 1710 | WP_149208776.1 | glycosyltransferase family 39 protein | - |
| FO488_RS00750 () | 154959..155560 | - | 602 | Protein_152 | helix-turn-helix transcriptional regulator | - |
| FO488_RS00755 () | 155754..157193 | + | 1440 | WP_149208777.1 | Periplasmic pH-dependent serine endoprotease DegQ | VF |
| FO488_RS00760 () | 157287..157550 | + | 264 | WP_149208778.1 | hypothetical protein | - |
| FO488_RS00765 () | 157645..158599 | + | 955 | Protein_155 | RluA family pseudouridine synthase | - |
| FO488_RS00770 () | 158870..160462 | + | 1593 | WP_168205820.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| FO488_RS19240 () | 160535..160990 | - | 456 | WP_168205821.1 | ferritin family protein | - |
| FO488_RS19245 () | 161037..161675 | - | 639 | WP_168205822.1 | HAD family hydrolase | - |
| FO488_RS00780 () | 161676..162821 | - | 1146 | WP_149208780.1 | SAM-dependent methyltransferase | - |
| FO488_RS00785 () | 162896..163930 | - | 1035 | WP_149208781.1 | transcriptional regulator | - |
| FO488_RS00790 () | 164051..164500 | + | 450 | WP_149208782.1 | DedA family protein | - |
| FO488_RS00795 () | 164526..165623 | + | 1098 | WP_149208783.1 | GGDEF domain-containing protein | - |
| FO488_RS00800 () | 165620..167350 | + | 1731 | WP_149208784.1 | exodeoxyribonuclease V subunit alpha | - |
| FO488_RS00805 () | 167469..168350 | + | 882 | WP_149208785.1 | complex I NDUFA9 subunit family protein | - |
| FO488_RS00810 () | 168439..168903 | + | 465 | WP_149208786.1 | septal ring lytic transglycosylase RlpA family protein | - |
| FO488_RS00820 () | 169294..170995 | + | 1702 | Protein_166 | DNA polymerase III subunit gamma/tau | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|