MGE detailed information
MGE type: Prophage MGE length: 16995 bp
Accession: NZ_CP042267 Location: 2551603..2568597 Organism: Clostridioides difficile strain Mta-79 Replicon: chromosome
Accession: NZ_CP042267 Location: 2551603..2568597 Organism: Clostridioides difficile strain Mta-79 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQN08_RS12220 () | 2546820..2547521 | + | 702 | WP_004454563.1 | AzlC family ABC transporter permease | - |
| FQN08_RS12225 () | 2547514..2547837 | + | 324 | WP_004454564.1 | AzlD domain-containing protein | - |
| FQN08_RS12230 () | 2548043..2550103 | - | 2061 | WP_009897457.1 | sensor histidine kinase | - |
| FQN08_RS12240 () | 2550299..2550991 | - | 693 | WP_004454566.1 | response regulator transcription factor | - |
| FQN08_RS12245 () | 2551603..2551977 | - | 375 | WP_021360753.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| FQN08_RS12250 () | 2552196..2552429 | + | 234 | WP_021416598.1 | hypothetical protein | VF |
| FQN08_RS12255 () | 2552413..2552826 | + | 414 | WP_021360755.1 | hypothetical protein | - |
| FQN08_RS12260 () | 2552845..2553141 | + | 297 | WP_009897463.1 | hypothetical protein | - |
| FQN08_RS12265 () | 2553424..2553741 | + | 318 | WP_004454574.1 | hypothetical protein | - |
| FQN08_RS12270 () | 2553877..2554341 | + | 465 | WP_032508861.1 | hypothetical protein | - |
| FQN08_RS12280 () | 2554670..2554831 | - | 162 | WP_004454578.1 | hypothetical protein | - |
| FQN08_RS19290 () | 2554883..2555697 | - | 815 | Protein_2295 | toxin Bro | - |
| FQN08_RS19295 () | 2555818..2556006 | - | 189 | WP_004454585.1 | hypothetical protein | - |
| FQN08_RS12295 () | 2557247..2558154 | - | 908 | Protein_2297 | SHOCT domain-containing protein | - |
| - () | 2558298..2558427 | + | 130 | NuclAT_1 | - | Antitoxin Detail |
| FQN08_RS12300 () | 2558348..2558500 | - | 153 | WP_004454589.1 | hypothetical protein | Toxin Detail |
| FQN08_RS12305 () | 2558773..2559096 | - | 324 | WP_009897482.1 | hypothetical protein | - |
| FQN08_RS12310 () | 2559132..2559386 | - | 255 | WP_004454592.1 | hypothetical protein | - |
| FQN08_RS12320 () | 2559826..2560344 | - | 519 | Protein_2301 | IS200-IS605 family transposase ISEfa4 | Transposase |
| FQN08_RS12325 () | 2560634..2561009 | - | 376 | Protein_2302 | BlaI/MecI/CopY family transcriptional regulator | - |
| FQN08_RS12330 () | 2561114..2561491 | - | 378 | WP_011861518.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| FQN08_RS12335 () | 2562295..2562789 | + | 495 | WP_011861519.1 | Type II secretion system protein G | VF |
| FQN08_RS12340 () | 2563178..2563348 | + | 171 | WP_004454601.1 | hypothetical protein | - |
| FQN08_RS12345 () | 2563825..2564014 | - | 190 | Protein_2306 | hypothetical protein | - |
| FQN08_RS12350 () | 2564176..2564526 | + | 351 | WP_004454606.1 | DUF3796 domain-containing protein | - |
| FQN08_RS12355 () | 2564528..2564728 | + | 201 | WP_003423163.1 | hypothetical protein | VF |
| FQN08_RS12360 () | 2565051..2565227 | + | 177 | WP_009890506.1 | hypothetical protein | - |
| FQN08_RS12365 () | 2565452..2565652 | + | 201 | WP_003423148.1 | cold-shock protein | - |
| FQN08_RS12370 () | 2566287..2567099 | + | 813 | WP_004454609.1 | molybdate ABC transporter substrate-binding protein | - |
| FQN08_RS12375 () | 2567109..2567900 | + | 792 | WP_021360764.1 | ABC transporter permease | - |
| FQN08_RS12380 () | 2567902..2568597 | + | 696 | WP_009893573.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| FQN08_RS12385 () | 2568584..2569315 | + | 732 | WP_021361484.1 | hypothetical protein | - |
| FQN08_RS12390 () | 2569629..2570429 | + | 801 | WP_004454616.1 | PIG-L family deacetylase | - |
| FQN08_RS12395 () | 2570969..2571685 | + | 717 | WP_004454617.1 | response regulator transcription factor | - |
| FQN08_RS12400 () | 2571654..2573246 | + | 1593 | WP_032510309.1 | sensor histidine kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Clostridium difficile 630 | Prophage | TA10176 | NC_009089 | 2658361..2675497 | 0.008 |