MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122471 bp
Accession: NZ_CP041920 Location: 1..122471 Organism: Escherichia coli strain Ec40743 Replicon: plasmid unnamed1
Accession: NZ_CP041920 Location: 1..122471 Organism: Escherichia coli strain Ec40743 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPV29_RS22995 () | 850..999 | - | 150 | Protein_1 | IS3 family transposase IS2 | Transposase |
| FPV29_RS23000 () | 1177..2369 | - | 1193 | Protein_2 | GTP-binding protein | - |
| FPV29_RS23010 () | 3592..4828 | - | 1237 | Protein_3 | IS3 family transposase IS2 | Transposase |
| FPV29_RS23015 () | 5455..5748 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| FPV29_RS23020 () | 5806..5981 | - | 176 | Protein_5 | lysis protein | - |
| FPV29_RS23030 () | 6559..7658 | + | 1100 | Protein_6 | IS481 family transposase ISKpn28 | Transposase |
| FPV29_RS23040 () | 8894..10009 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| FPV29_RS23045 () | 10149..13808 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| FPV29_RS23050 () | 13912..15141 | + | 1230 | WP_001552738.1 | Enterochelin esterase | VF |
| FPV29_RS23055 () | 15226..16182 | + | 957 | WP_000271276.1 | Ferri-bacillibactin esterase BesA | VF |
| FPV29_RS23060 () | 16227..18404 | - | 2178 | WP_072657522.1 | Ferric enterobactin receptor | VF |
| FPV29_RS23065 () | 19006..19710 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FPV29_RS23070 () | 19747..20583 | - | 837 | WP_094932091.1 | Dihydropteroate synthase | ARG |
| FPV29_RS23075 () | 20577..20924 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| FPV29_RS23080 () | 21130..21918 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| FPV29_RS23085 () | 22049..22522 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| FPV29_RS23090 () | 22680..23693 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| FPV29_RS23100 () | 23896..24246 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| FPV29_RS23105 () | 24372..24533 | + | 162 | Protein_19 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| FPV29_RS23110 () | 24582..25286 | - | 705 | WP_073520228.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| FPV29_RS23115 () | 25311..25760 | + | 450 | WP_050491481.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| FPV29_RS23120 () | 25763..28729 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| FPV29_RS23125 () | 28738..29154 | + | 417 | WP_031610367.1 | hypothetical protein | - |
| FPV29_RS23135 () | 29631..29897 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| FPV29_RS23140 () | 29897..30391 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| FPV29_RS23145 () | 30447..31049 | - | 603 | WP_000517689.1 | hypothetical protein | - |
| FPV29_RS23155 () | 31403..32749 | + | 1347 | WP_001132019.1 | hypothetical protein | - |
| FPV29_RS23160 () | 33028..34908 | + | 1881 | WP_001283356.1 | colicin | - |
| FPV29_RS23165 () | 34926..35273 | - | 348 | WP_000762580.1 | hypothetical protein | - |
| FPV29_RS23170 () | 35392..35739 | + | 348 | WP_000142424.1 | hypothetical protein | - |
| FPV29_RS23175 () | 35757..36347 | - | 591 | WP_000194555.1 | hypothetical protein | - |
| FPV29_RS23180 () | 36344..36604 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| FPV29_RS23190 () | 37175..37525 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| FPV29_RS23195 () | 37569..38258 | + | 690 | WP_000796228.1 | hypothetical protein | - |
| FPV29_RS23200 () | 38255..39046 | + | 792 | WP_000016493.1 | site-specific integrase | - |
| FPV29_RS23205 () | 39224..39577 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| FPV29_RS23210 () | 39627..40442 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| FPV29_RS23220 () | 40686..41213 | + | 528 | WP_000203272.1 | colicin B immunity protein | - |
| FPV29_RS23225 () | 41231..41398 | - | 168 | Protein_39 | colicin-B | - |
| FPV29_RS23230 () | 41571..41852 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| FPV29_RS23235 () | 42316..42552 | + | 237 | WP_014640552.1 | colicin V immunity protein | - |
| FPV29_RS23240 () | 42530..42604 | + | 75 | Protein_42 | colicin | - |
| FPV29_RS23245 () | 42656..43353 | + | 698 | Protein_43 | IS1 family transposase | - |
| FPV29_RS23250 () | 43365..43514 | + | 150 | Protein_44 | 3-deoxy-7-phosphoheptulonate synthase | - |
| FPV29_RS23260 () | 43890..44594 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FPV29_RS23265 () | 44643..45548 | - | 906 | Protein_46 | IS4 family transposase IS10R | Transposase |
| FPV29_RS23270 () | 45658..46602 | - | 945 | Protein_47 | IS4 family transposase IS10R | Transposase |
| FPV29_RS23280 () | 46612..47316 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FPV29_RS23285 () | 47619..48479 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| FPV29_RS23290 () | 48629..48727 | - | 99 | Protein_50 | IS1 family transposase | - |
| FPV29_RS23295 () | 48756..50066 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| FPV29_RS23300 () | 50351..50752 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FPV29_RS23305 () | 50685..50942 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FPV29_RS23310 () | 51035..51688 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| FPV29_RS24935 () | 51786..51926 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| FPV29_RS23320 () | 52627..53484 | - | 858 | WP_113446638.1 | incFII family plasmid replication initiator RepA | - |
| FPV29_RS23325 () | 53477..53959 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| FPV29_RS23330 () | 53952..54026 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| FPV29_RS23340 () | 54258..54515 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| FPV29_RS23345 () | 54799..55005 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 54992..55053 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 54992..55053 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 54992..55053 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 54992..55053 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| FPV29_RS24940 () | 55309..55383 | - | 75 | Protein_61 | endonuclease | - |
| FPV29_RS23355 () | 55629..55841 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| FPV29_RS23360 () | 55977..56537 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| FPV29_RS23365 () | 56640..57500 | - | 861 | WP_000704514.1 | putative protein YcjY | VF |
| FPV29_RS23370 () | 57559..58305 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| FPV29_RS23375 () | 58325..63595 | - | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| FPV29_RS23380 () | 63677..63904 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FPV29_RS23385 () | 63904..64302 | + | 399 | WP_000911313.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FPV29_RS23390 () | 64311..66464 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| FPV29_RS23400 () | 66717..67448 | - | 732 | WP_023565183.1 | complement resistance protein TraT | - |
| FPV29_RS23405 () | 67480..67977 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| FPV29_RS23410 () | 67993..70815 | - | 2823 | WP_001007018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FPV29_RS23415 () | 70812..72185 | - | 1374 | WP_001517790.1 | conjugal transfer protein TraH | - |
| FPV29_RS23420 () | 72185..72598 | - | 414 | WP_001324104.1 | F-type conjugal transfer protein TrbF | - |
| FPV29_RS23425 () | 72552..72893 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| FPV29_RS23430 () | 72823..73368 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FPV29_RS23435 () | 73355..73639 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FPV29_RS23440 () | 73720..74034 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| FPV29_RS23445 () | 74036..74383 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| FPV29_RS23450 () | 74399..75142 | - | 744 | WP_144114365.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FPV29_RS23455 () | 75135..75392 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| FPV29_RS23460 () | 75419..77227 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FPV29_RS23465 () | 77224..77862 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FPV29_RS23470 () | 77871..78863 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| FPV29_RS23475 () | 78860..79492 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FPV29_RS23480 () | 79489..79875 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| FPV29_RS23485 () | 79872..82499 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| FPV29_RS23490 () | 82697..83394 | + | 698 | Protein_88 | IS1-like element IS1A family transposase | - |
| FPV29_RS23495 () | 83510..83797 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| FPV29_RS23510 () | 84718..84876 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 84920..85144 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 84920..85144 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 84920..85144 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 84920..85144 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| FPV29_RS24945 () | 84956..85144 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| FPV29_RS23515 () | 85156..85875 | - | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| FPV29_RS23520 () | 85872..86306 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| FPV29_RS23525 () | 86361..86558 | - | 198 | Protein_94 | hypothetical protein | - |
| FPV29_RS23530 () | 86586..86819 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| FPV29_RS23535 () | 86887..87426 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| FPV29_RS23540 () | 87452..87658 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| FPV29_RS23560 () | 88797..89768 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FPV29_RS23565 () | 89768..90934 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| FPV29_RS23570 () | 91234..91931 | - | 698 | Protein_100 | IS1-like element IS1A family transposase | - |
| FPV29_RS23575 () | 92416..94617 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| FPV29_RS23580 () | 94699..95976 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| FPV29_RS23585 () | 95973..97715 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| FPV29_RS23590 () | 97715..98662 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| FPV29_RS23595 () | 98663..100387 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| FPV29_RS23600 () | 100523..101716 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| FPV29_RS23605 () | 102096..102476 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| FPV29_RS23615 () | 102817..103230 | - | 414 | Protein_108 | phosphopyruvate hydratase | - |
| FPV29_RS23620 () | 103228..103485 | + | 258 | Protein_109 | Tn3 family transposase | - |
| FPV29_RS23625 () | 103719..104576 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| FPV29_RS23630 () | 104573..105430 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| FPV29_RS23635 () | 105427..106254 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| FPV29_RS23640 () | 106254..107168 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| FPV29_RS23650 () | 107524..108221 | + | 698 | Protein_114 | IS1 family transposase | - |
| FPV29_RS23655 () | 108401..108914 | - | 514 | Protein_115 | DUF4113 domain-containing protein | - |
| FPV29_RS23660 () | 108975..109079 | - | 105 | Protein_116 | AAA family ATPase | - |
| FPV29_RS23665 () | 109081..109404 | - | 324 | Protein_117 | IS21 family transposase IS21 | Transposase |
| FPV29_RS23675 () | 110150..111127 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| FPV29_RS23680 () | 111412..112152 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| FPV29_RS23685 () | 112273..112461 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| FPV29_RS23690 () | 112835..113737 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| FPV29_RS23695 () | 113806..114915 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| FPV29_RS23705 () | 115348..116301 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| FPV29_RS23720 () | 117574..117732 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| FPV29_RS23725 () | 117916..118218 | + | 303 | Protein_125 | IS3 family transposase IS1203 | Transposase |
| FPV29_RS23730 () | 118274..118971 | + | 698 | Protein_126 | IS1 family transposase | - |
| FPV29_RS23735 () | 118965..119246 | - | 282 | WP_072834405.1 | hypothetical protein | - |
| FPV29_RS23740 () | 119387..121213 | - | 1827 | WP_001339650.1 | AAA family ATPase | - |
| FPV29_RS23745 () | 121216..121701 | - | 486 | WP_001015823.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|