MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108375 bp
Accession: NZ_CP041512 Location: 1..108375 Organism: Shigella boydii strain KCCM 41690 Replicon: plasmid unnamed
Accession: NZ_CP041512 Location: 1..108375 Organism: Shigella boydii strain KCCM 41690 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNA65_RS00010 () | 440..1125 | + | 686 | Protein_1 | IS3 family transposase ISSfl11 | Transposase |
| FNA65_RS00015 () | 1142..1660 | + | 519 | Protein_2 | IS66 family transposase IS679 | Transposase |
| FNA65_RS00020 () | 1783..2480 | - | 698 | Protein_3 | IS1 family transposase IS1R | Transposase |
| FNA65_RS00025 () | 2678..3906 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| FNA65_RS00030 () | 3998..4694 | + | 697 | Protein_5 | IS1 family transposase | - |
| FNA65_RS00035 () | 4700..4873 | + | 174 | Protein_6 | hypothetical protein | VF |
| FNA65_RS00045 () | 5233..5973 | - | 741 | WP_000850663.1 | PAP2 family phosphatase PhoN2 | - |
| FNA65_RS00050 () | 6302..7168 | - | 867 | WP_001046939.1 | hypothetical protein | VF |
| FNA65_RS00055 () | 7418..7537 | - | 120 | Protein_9 | DUF3440 domain-containing protein | - |
| FNA65_RS00060 () | 7647..8875 | + | 1229 | WP_167549346.1 | IS3 family transposase IS2 | Transposase |
| FNA65_RS00075 () | 10704..11651 | - | 948 | WP_005005342.1 | Outer membrane protease IcsP | VF |
| FNA65_RS00080 () | 13031..13183 | - | 153 | Protein_13 | IS3 family transposase | - |
| FNA65_RS00085 () | 13239..13931 | + | 693 | WP_000625263.1 | hypothetical protein | VF |
| FNA65_RS00090 () | 13955..15031 | - | 1077 | Protein_15 | IS3 family transposase IS911 | Transposase |
| FNA65_RS00095 () | 15200..15682 | - | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| FNA65_RS00100 () | 15673..15975 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| FNA65_RS00110 () | 16247..16519 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| FNA65_RS00120 () | 17927..19021 | + | 1095 | Protein_20 | IS91 family transposase | - |
| FNA65_RS00125 () | 19193..19321 | + | 129 | Protein_21 | IS5 family transposase ISSfl7 | Transposase |
| FNA65_RS00135 () | 19470..20924 | - | 1455 | WP_000701110.1 | hypothetical protein | VF |
| FNA65_RS00140 () | 21349..22193 | + | 845 | WP_094096542.1 | IS5 family transposase ISSfl7 | Transposase |
| FNA65_RS00145 () | 22438..22719 | - | 282 | Protein_24 | transposase domain-containing protein | - |
| FNA65_RS00150 () | 22774..23028 | + | 255 | Protein_25 | IS3 family transposase IS1203 | Transposase |
| FNA65_RS00155 () | 23136..23324 | + | 189 | WP_000957863.1 | hypothetical protein | - |
| FNA65_RS00160 () | 23334..24533 | + | 1200 | WP_134796874.1 | IS91 family transposase ISSbo1 | Transposase |
| FNA65_RS00165 () | 24705..25028 | + | 324 | Protein_28 | IS110 family transposase IS1663 | Transposase |
| FNA65_RS00180 () | 26012..26869 | - | 858 | WP_000130973.1 | incFII family plasmid replication initiator RepA | - |
| FNA65_RS00185 () | 26862..26936 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| FNA65_RS00195 () | 27160..27420 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| FNA65_RS00200 () | 27660..28250 | - | 591 | WP_000766818.1 | DUF2726 domain-containing protein | - |
| FNA65_RS00205 () | 28361..29058 | + | 698 | Protein_33 | IS1 family transposase IS1R | Transposase |
| FNA65_RS00210 () | 29069..29275 | - | 207 | WP_012421743.1 | hemolysin expression modulator Hha | - |
| FNA65_RS00215 () | 29321..29781 | - | 461 | Protein_35 | thermonuclease family protein | - |
| FNA65_RS00225 () | 30025..30237 | - | 213 | WP_011379083.1 | ANR family transcriptional regulator | - |
| FNA65_RS00230 () | 30368..30928 | - | 561 | WP_005056178.1 | fertility inhibition protein FinO | - |
| FNA65_RS00235 () | 30983..31729 | - | 747 | WP_000205722.1 | conjugal transfer pilus acetylase TraX | - |
| FNA65_RS00240 () | 31749..36620 | - | 4872 | WP_039058931.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| FNA65_RS00245 () | 36607..36900 | - | 294 | WP_171548087.1 | relaxase domain-containing protein | - |
| FNA65_RS00250 () | 37104..37331 | + | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FNA65_RS00255 () | 37331..37729 | + | 399 | WP_000911319.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FNA65_RS00260 () | 37738..39935 | - | 2198 | Protein_43 | type IV conjugative transfer system coupling protein TraD | - |
| FNA65_RS00265 () | 40183..40880 | + | 698 | Protein_44 | IS1 family transposase IS1X2 | Transposase |
| FNA65_RS00270 () | 40896..41567 | + | 672 | Protein_45 | IS630 family transposase IS630 | Transposase |
| FNA65_RS00275 () | 41722..42665 | - | 944 | Protein_46 | Lipid A biosynthesis myristoyltransferase | VF |
| FNA65_RS00280 () | 42730..43680 | - | 951 | WP_012421771.1 | virulence factor VirK | - |
| FNA65_RS00285 () | 43685..44773 | - | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| FNA65_RS00290 () | 44776..45618 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| FNA65_RS00295 () | 45982..46098 | - | 117 | WP_004996477.1 | hypothetical protein | - |
| FNA65_RS00300 () | 46305..47002 | + | 698 | Protein_51 | IS1 family transposase IS1X2 | Transposase |
| FNA65_RS00305 () | 47017..47502 | - | 486 | WP_039058926.1 | hypothetical protein | VF |
| FNA65_RS00315 () | 47754..48023 | - | 270 | WP_000079956.1 | hypothetical protein | - |
| FNA65_RS00320 () | 48231..49868 | - | 1638 | WP_012421769.1 | hypothetical protein | VF |
| FNA65_RS00325 () | 50130..50225 | - | 96 | Protein_55 | transposase domain-containing protein | - |
| FNA65_RS00330 () | 50261..50566 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FNA65_RS00335 () | 50568..50786 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FNA65_RS00345 () | 51379..51651 | + | 273 | WP_012421738.1 | hypothetical protein | - |
| FNA65_RS00350 () | 51739..52952 | + | 1214 | Protein_59 | IS3 family transposase IS629 | Transposase |
| FNA65_RS00355 () | 52996..53127 | - | 132 | Protein_60 | IS3 family transposase IS911 | Transposase |
| FNA65_RS00360 () | 53199..53489 | + | 291 | Protein_61 | reverse transcriptase | - |
| FNA65_RS00365 () | 53563..53682 | + | 120 | Protein_62 | transposase domain-containing protein | - |
| FNA65_RS00370 () | 53722..54030 | - | 309 | Protein_63 | IS1 family transposase IS1X2 | Transposase |
| FNA65_RS00375 () | 54067..55605 | - | 1539 | WP_000099170.1 | IS66 family transposase ISEc22 | Transposase |
| FNA65_RS00380 () | 55654..56001 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| FNA65_RS00385 () | 55998..56378 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| FNA65_RS00390 () | 56473..57414 | + | 942 | Protein_67 | IS91 family transposase ISSbo1 | Transposase |
| FNA65_RS00395 () | 57587..57682 | - | 96 | Protein_68 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FNA65_RS00400 () | 57682..57765 | - | 84 | Protein_69 | CopG family transcriptional regulator | - |
| FNA65_RS00405 () | 57795..58124 | - | 330 | Protein_70 | Tn3 family transposase TnpA_ISSod9 | Transposase |
| FNA65_RS00410 () | 58209..58574 | + | 366 | WP_000124079.1 | hypothetical protein | - |
| FNA65_RS00415 () | 58574..59761 | + | 1188 | WP_024258531.1 | IS91 family transposase ISEc37 | Transposase |
| FNA65_RS00425 () | 60299..60586 | - | 288 | WP_000865087.1 | helix-turn-helix transcriptional regulator | - |
| FNA65_RS00430 () | 60586..60897 | - | 312 | WP_000483533.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FNA65_RS00435 () | 61361..62557 | + | 1197 | WP_134797190.1 | IS110 family transposase ISEc20 | Transposase |
| FNA65_RS00440 () | 62927..63193 | - | 267 | WP_000957717.1 | hypothetical protein | VF |
| FNA65_RS00445 () | 63375..63488 | - | 114 | Protein_77 | transposase | - |
| FNA65_RS00450 () | 63533..64230 | + | 698 | Protein_78 | IS1 family transposase IS1R | Transposase |
| FNA65_RS00455 () | 64562..65350 | + | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| FNA65_RS00460 () | 65292..65714 | - | 423 | WP_073692982.1 | IS21 family transposase IS100 | Transposase |
| FNA65_RS00465 () | 65713..66131 | + | 419 | Protein_81 | transposase | - |
| FNA65_RS00470 () | 66205..67281 | + | 1077 | Protein_82 | IS3 family transposase IS911 | Transposase |
| FNA65_RS00475 () | 67477..67632 | + | 156 | Protein_83 | IS256 family transposase ISEc39 | Transposase |
| FNA65_RS00480 () | 67662..69389 | - | 1728 | WP_012421744.1 | hypothetical protein | VF |
| FNA65_RS00485 () | 69779..70047 | - | 269 | Protein_85 | hypothetical protein | - |
| FNA65_RS00490 () | 70156..70379 | - | 224 | Protein_86 | hypothetical protein | - |
| FNA65_RS24845 () | 70695..70847 | - | 153 | WP_011114782.1 | hypothetical protein | - |
| FNA65_RS00495 () | 70886..71409 | + | 524 | Protein_88 | IS3 family transposase ISSfl11 | Transposase |
| FNA65_RS00500 () | 71452..72661 | - | 1210 | Protein_89 | IS3 family transposase IS629 | Transposase |
| FNA65_RS00510 () | 72964..73146 | + | 183 | WP_089519923.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FNA65_RS00515 () | 73166..74767 | + | 1602 | WP_004967149.1 | IS66 family transposase ISSfl3 | Transposase |
| FNA65_RS00520 () | 74767..75264 | + | 498 | Protein_92 | IS1 family transposase | - |
| FNA65_RS24850 () | 75423..76061 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| FNA65_RS00530 () | 76176..76445 | + | 270 | Protein_94 | IS3 family transposase ISEc48 | Transposase |
| FNA65_RS00535 () | 76533..77761 | + | 1229 | WP_167549346.1 | IS3 family transposase IS2 | Transposase |
| FNA65_RS00540 () | 77774..77878 | - | 105 | Protein_96 | DUF1472 domain-containing protein | - |
| FNA65_RS00545 () | 78009..78135 | + | 127 | Protein_97 | IS110 family transposase | - |
| FNA65_RS00565 () | 79986..80270 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| FNA65_RS00570 () | 80258..80743 | + | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | Toxin Detail |
| FNA65_RS00575 () | 80784..82376 | - | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| FNA65_RS00580 () | 82407..82757 | - | 351 | Protein_102 | IS66 family transposase ISEc23 | Transposase |
| FNA65_RS00590 () | 82879..84088 | + | 1210 | Protein_103 | IS3 family transposase IS629 | Transposase |
| FNA65_RS00595 () | 84125..84304 | + | 180 | Protein_104 | IS66 family transposase IS679 | Transposase |
| FNA65_RS00605 () | 84830..86008 | + | 1179 | WP_073692916.1 | group II intron reverse transcriptase/maturase | - |
| FNA65_RS00610 () | 86091..86270 | + | 180 | Protein_106 | transposase domain-containing protein | - |
| FNA65_RS00615 () | 86300..86782 | - | 483 | Protein_107 | IS110 family transposase ISSde4 | Transposase |
| FNA65_RS00620 () | 87038..88018 | - | 981 | WP_000431558.1 | ParB/RepB/Spo0J family partition protein | - |
| FNA65_RS00625 () | 88018..89217 | - | 1200 | WP_000200287.1 | AAA family ATPase | - |
| FNA65_RS00630 () | 89355..89516 | - | 162 | WP_072037198.1 | protein encoded within IS | - |
| FNA65_RS00635 () | 89539..89876 | - | 338 | Protein_111 | IS1 family transposase | - |
| FNA65_RS00640 () | 89943..90724 | - | 782 | Protein_112 | IS21 family transposase IS100 | Transposase |
| FNA65_RS00645 () | 90721..91742 | - | 1022 | Protein_113 | IS21 family transposase IS100kyp | Transposase |
| FNA65_RS00650 () | 91828..91974 | - | 147 | Protein_114 | IS1 family transposase | - |
| FNA65_RS00655 () | 92015..92712 | + | 698 | Protein_115 | IS1 family transposase IS1R | Transposase |
| FNA65_RS00660 () | 92726..92964 | - | 239 | Protein_116 | IS1 family transposase IS1N | Transposase |
| FNA65_RS00665 () | 93304..93858 | - | 555 | Protein_117 | IS3 family transposase IS3H | Transposase |
| FNA65_RS00670 () | 94001..94123 | + | 123 | Protein_118 | transposase domain-containing protein | - |
| FNA65_RS00680 () | 94385..94951 | - | 567 | WP_005057975.1 | hypothetical protein | VF |
| FNA65_RS24855 () | 95233..95547 | - | 315 | WP_011114726.1 | hypothetical protein | - |
| FNA65_RS00695 () | 95625..95735 | - | 111 | Protein_121 | IS3 family transposase | - |
| FNA65_RS00705 () | 96059..96735 | - | 677 | Protein_122 | hypothetical protein | VF |
| FNA65_RS00710 () | 97105..97242 | - | 138 | Protein_123 | IS630 family transposase | - |
| FNA65_RS00715 () | 97324..97622 | - | 299 | Protein_124 | IS256 family transposase IS1414 | Transposase |
| FNA65_RS00725 () | 98211..98370 | - | 160 | Protein_125 | IS3 family transposase | - |
| FNA65_RS00730 () | 98374..99528 | - | 1155 | Protein_126 | IS66 family transposase ISCro1 | Transposase |
| FNA65_RS00735 () | 99548..99895 | - | 348 | WP_000622995.1 | IS66 family transposase ISCro1 | Transposase |
| FNA65_RS00740 () | 99895..100272 | - | 378 | Protein_128 | IS66 family transposase ISCro1 | Transposase |
| FNA65_RS00745 () | 100339..101685 | + | 1347 | WP_000483764.1 | IS4 family transposase IS4 | Transposase |
| FNA65_RS00750 () | 101699..101980 | - | 282 | Protein_130 | IS66 family transposase ISCro1 | Transposase |
| FNA65_RS00755 () | 102143..102328 | + | 186 | WP_005008511.1 | hypothetical protein | - |
| FNA65_RS00760 () | 102376..102805 | + | 430 | Protein_132 | IS91 family transposase ISEc37 | Transposase |
| FNA65_RS00765 () | 102992..103229 | + | 238 | Protein_133 | IS21 family transposase IS21 | Transposase |
| FNA65_RS00770 () | 103650..104228 | + | 579 | WP_000868561.1 | hypothetical protein | - |
| FNA65_RS00775 () | 104337..104595 | - | 259 | Protein_135 | IS1 family transposase | - |
| FNA65_RS00780 () | 104579..105142 | + | 564 | Protein_136 | ISL3 family transposase ISKox3 | Transposase |
| FNA65_RS00785 () | 105267..105986 | + | 720 | WP_001121865.1 | Phosphothreonine lyase OspF | VF |
| FNA65_RS00790 () | 106418..108125 | + | 1708 | Protein_138 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|