MGE detailed information
MGE type: Conjugative plasmid MGE length: 89435 bp
Accession: NZ_CP041438 Location: 1..89435 Organism: Escherichia coli strain STEC005 Replicon: plasmid pSTEC005
Accession: NZ_CP041438 Location: 1..89435 Organism: Escherichia coli strain STEC005 Replicon: plasmid pSTEC005
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE80_RS23900 () | 337..969 | + | 633 | WP_161620971.1 | helix-turn-helix domain-containing protein | - |
| FNE80_RS23905 () | 1391..1663 | + | 273 | WP_096934564.1 | transcriptional regulator | - |
| FNE80_RS23910 () | 1798..2316 | + | 519 | WP_161620972.1 | fimbrial protein | - |
| FNE80_RS23915 () | 2424..4835 | + | 2412 | WP_161620973.1 | PefC/AfrB family outer membrane usher protein | - |
| FNE80_RS23920 () | 4828..5520 | + | 693 | WP_161620445.1 | fimbrial chaperone | - |
| FNE80_RS23925 () | 5507..6016 | + | 510 | WP_135497828.1 | hypothetical protein | - |
| FNE80_RS23930 () | 6029..6982 | + | 954 | WP_161620974.1 | hypothetical protein | - |
| FNE80_RS23935 () | 7283..7558 | + | 276 | Protein_7 | omptin family outer membrane protease | - |
| FNE80_RS23940 () | 7594..7913 | - | 320 | Protein_8 | IS110 family transposase | - |
| FNE80_RS23945 () | 7942..9441 | + | 1500 | WP_047662411.1 | alpha/beta hydrolase | - |
| FNE80_RS23950 () | 9812..10072 | + | 261 | Protein_10 | hypothetical protein | - |
| FNE80_RS23955 () | 10193..10933 | + | 741 | WP_001584328.1 | tyrosine-type recombinase/integrase | - |
| FNE80_RS23960 () | 11218..12195 | - | 978 | WP_161620975.1 | RepB family plasmid replication initiator protein | - |
| FNE80_RS23965 () | 12976..13572 | - | 597 | WP_096934560.1 | hypothetical protein | - |
| FNE80_RS23970 () | 13560..13829 | - | 270 | WP_096934559.1 | hypothetical protein | - |
| FNE80_RS23975 () | 14149..15081 | - | 933 | WP_096934558.1 | hypothetical protein | - |
| FNE80_RS23980 () | 15085..16080 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| FNE80_RS23985 () | 16376..16837 | + | 462 | Protein_17 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| FNE80_RS23990 () | 16906..17148 | - | 243 | WP_096934556.1 | hypothetical protein | - |
| FNE80_RS23995 () | 18152..18925 | - | 774 | WP_161619136.1 | YaiO family outer membrane beta-barrel protein | - |
| FNE80_RS24000 () | 18927..19508 | - | 582 | WP_096934554.1 | acetyltransferase | - |
| FNE80_RS24005 () | 19486..20682 | - | 1197 | WP_161619135.1 | glycosyltransferase family 2 protein | - |
| FNE80_RS24010 () | 20693..21358 | - | 666 | WP_096934566.1 | PIG-L family deacetylase | - |
| FNE80_RS24015 () | 22449..22652 | + | 204 | Protein_23 | transposase | - |
| FNE80_RS24020 () | 22642..23067 | + | 426 | Protein_24 | hypothetical protein | - |
| FNE80_RS24025 () | 23607..23825 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FNE80_RS24030 () | 23827..24132 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FNE80_RS24035 () | 24133..24942 | + | 810 | WP_161619134.1 | site-specific integrase | - |
| FNE80_RS24040 () | 25080..25355 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| FNE80_RS24045 () | 25349..25993 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| FNE80_RS24050 () | 26222..27193 | + | 972 | WP_001103694.1 | hypothetical protein | - |
| FNE80_RS24055 () | 27198..27590 | + | 393 | WP_000340833.1 | plasmid partitioning/stability family protein | - |
| FNE80_RS24065 () | 27595..28865 | - | 1271 | Protein_32 | translesion error-prone DNA polymerase V subunit UmuC | - |
| FNE80_RS24070 () | 28865..29302 | - | 438 | WP_032219119.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FNE80_RS24075 () | 29299..29547 | - | 249 | WP_019842136.1 | DinI-like family protein | - |
| FNE80_RS24080 () | 29965..30867 | + | 903 | WP_124062600.1 | DUF1281 domain-containing protein | - |
| FNE80_RS24085 () | 30864..31175 | + | 312 | WP_032219116.1 | hypothetical protein | - |
| FNE80_RS24090 () | 31252..31935 | + | 684 | WP_032219114.1 | DNA methylase | - |
| FNE80_RS24095 () | 31936..32157 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| FNE80_RS24100 () | 32171..32605 | + | 435 | WP_040072501.1 | DUF1380 family protein | - |
| FNE80_RS24105 () | 32650..33420 | + | 771 | WP_178086517.1 | hypothetical protein | - |
| FNE80_RS24115 () | 33960..34262 | + | 303 | WP_001436678.1 | antirestriction protein | - |
| FNE80_RS24120 () | 34309..34728 | + | 420 | WP_000271711.1 | DUF1380 family protein | - |
| FNE80_RS24125 () | 34728..34919 | + | 192 | WP_001027497.1 | hypothetical protein | - |
| FNE80_RS24135 () | 35728..36267 | + | 540 | WP_032219151.1 | single-stranded DNA-binding protein | - |
| FNE80_RS24140 () | 36330..36563 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
| FNE80_RS24145 () | 36627..38585 | + | 1959 | WP_032219150.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE80_RS24150 () | 38640..39074 | + | 435 | WP_000845926.1 | conjugation system SOS inhibitor PsiB | - |
| FNE80_RS24155 () | 39071..39790 | + | 720 | WP_040072503.1 | plasmid SOS inhibition protein A | - |
| - () | 39802..40000 | + | 199 | NuclAT_0 | - | - |
| - () | 39802..40000 | + | 199 | NuclAT_0 | - | - |
| - () | 39802..40000 | + | 199 | NuclAT_0 | - | - |
| - () | 39802..40000 | + | 199 | NuclAT_0 | - | - |
| FNE80_RS24160 () | 40065..40223 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| FNE80_RS24635 () | 40461..40778 | - | 318 | WP_001356354.1 | hypothetical protein | - |
| FNE80_RS24170 () | 41211..41408 | + | 198 | WP_045174704.1 | hypothetical protein | - |
| FNE80_RS24175 () | 41527..42348 | + | 822 | WP_001234475.1 | DUF945 domain-containing protein | - |
| FNE80_RS24180 () | 42643..43233 | - | 591 | WP_001375132.1 | transglycosylase SLT domain-containing protein | - |
| FNE80_RS24185 () | 43567..43950 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| FNE80_RS24190 () | 44140..44826 | + | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| FNE80_RS24195 () | 44920..45147 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| FNE80_RS24200 () | 45181..45546 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| FNE80_RS24205 () | 45561..45872 | + | 312 | WP_000012126.1 | type IV conjugative transfer system protein TraL | - |
| FNE80_RS24210 () | 45894..46460 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| FNE80_RS24215 () | 46471..47175 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| FNE80_RS24220 () | 47175..48602 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| FNE80_RS24225 () | 48592..49182 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| FNE80_RS24230 () | 49136..49489 | + | 354 | WP_071533315.1 | conjugal transfer protein TrbD | - |
| FNE80_RS24235 () | 49482..49733 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FNE80_RS24240 () | 49730..50245 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE80_RS24245 () | 50380..50601 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FNE80_RS24250 () | 50761..53388 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| FNE80_RS24255 () | 53385..53771 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| FNE80_RS24260 () | 53768..54400 | + | 633 | WP_161620449.1 | type-F conjugative transfer system protein TraW | - |
| FNE80_RS24265 () | 54397..55389 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE80_RS24270 () | 55398..56036 | + | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FNE80_RS24275 () | 56033..57841 | + | 1809 | WP_097710798.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FNE80_RS24280 () | 57868..58125 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| FNE80_RS24285 () | 58118..58861 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE80_RS24290 () | 58877..59224 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| FNE80_RS24295 () | 59226..59540 | - | 315 | Protein_76 | toxin ArtA | - |
| FNE80_RS24300 () | 59621..59905 | + | 285 | WP_161619132.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE80_RS24305 () | 59892..60437 | + | 546 | WP_161619131.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE80_RS24310 () | 60367..60708 | + | 342 | WP_161620976.1 | P-type conjugative transfer protein TrbJ | - |
| FNE80_RS24315 () | 60662..61075 | + | 414 | WP_161620977.1 | F-type conjugal transfer protein TrbF | - |
| FNE80_RS24320 () | 61075..62448 | + | 1374 | WP_172949700.1 | conjugal transfer protein TraH | - |
| FNE80_RS24325 () | 62445..65261 | + | 2817 | WP_161619129.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FNE80_RS24330 () | 65294..65815 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| FNE80_RS24335 () | 65840..66571 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| FNE80_RS24340 () | 66824..68977 | + | 2154 | WP_161619128.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE80_RS24345 () | 68986..69384 | - | 399 | WP_000911315.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FNE80_RS24350 () | 69384..69611 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FNE80_RS24355 () | 69693..74963 | + | 5271 | WP_161620978.1 | conjugative transfer relaxase/helicase TraI | - |
| FNE80_RS24360 () | 74983..75723 | + | 741 | WP_161619126.1 | conjugal transfer pilus acetylase TraX | - |
| FNE80_RS24365 () | 75782..76642 | + | 861 | WP_161619125.1 | alpha/beta hydrolase | - |
| FNE80_RS24370 () | 76745..77305 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| FNE80_RS24375 () | 77437..77595 | + | 159 | WP_021545194.1 | hypothetical protein | - |
| FNE80_RS24380 () | 77894..78355 | + | 462 | WP_021545193.1 | thermonuclease family protein | - |
| FNE80_RS24385 () | 78401..78610 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| FNE80_RS24390 () | 78648..79238 | + | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| FNE80_RS24395 () | 79478..79735 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| FNE80_RS24400 () | 79969..80043 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| FNE80_RS24405 () | 80036..80893 | + | 858 | WP_161620979.1 | incFII family plasmid replication initiator RepA | - |
| FNE80_RS24415 () | 81807..82076 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| FNE80_RS24420 () | 82073..82354 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNE80_RS24425 () | 82618..83790 | + | 1173 | WP_096934598.1 | hypothetical protein | - |
| FNE80_RS24430 () | 83893..84804 | + | 912 | WP_161620980.1 | toll/interleukin-1 receptor domain-containing protein | - |
| FNE80_RS24435 () | 84946..85305 | - | 360 | WP_161620981.1 | plasmid partitioning/stability family protein | - |
| FNE80_RS24440 () | 85340..85891 | - | 552 | Protein_104 | plasmid stabilization protein | - |
| FNE80_RS24445 () | 85885..86106 | + | 222 | WP_077775928.1 | hypothetical protein | - |
| FNE80_RS24450 () | 86128..86463 | - | 336 | WP_001080736.1 | colicin transporter | - |
| FNE80_RS24455 () | 86592..86939 | + | 348 | WP_033812875.1 | hypothetical protein | - |
| FNE80_RS24460 () | 87193..87435 | + | 243 | WP_136769170.1 | plasmid pRiA4b ORF-3 family protein | - |
| FNE80_RS24465 () | 87432..87689 | + | 258 | WP_178086518.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|