MGE detailed information
MGE type: Conjugative plasmid MGE length: 88727 bp
Accession: NZ_CP041436 Location: 1..88727 Organism: Escherichia coli strain STEC309 Replicon: plasmid pSTEC309
Accession: NZ_CP041436 Location: 1..88727 Organism: Escherichia coli strain STEC309 Replicon: plasmid pSTEC309
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE81_RS23900 () | 223..504 | - | 282 | Protein_0 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FNE81_RS23905 () | 501..769 | - | 269 | Protein_1 | hypothetical protein | - |
| FNE81_RS23915 () | 1683..2540 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| FNE81_RS23920 () | 2533..2607 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| FNE81_RS23925 () | 2841..3098 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| FNE81_RS23930 () | 3338..3928 | - | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| FNE81_RS23935 () | 3966..4175 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| FNE81_RS23940 () | 4221..4682 | - | 462 | WP_021545193.1 | thermonuclease family protein | - |
| FNE81_RS23945 () | 4982..5140 | - | 159 | WP_021545194.1 | hypothetical protein | - |
| FNE81_RS23950 () | 5272..5832 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| FNE81_RS23955 () | 5935..6795 | - | 861 | WP_161619125.1 | hypothetical protein | VF |
| FNE81_RS23960 () | 6854..7594 | - | 741 | WP_161619126.1 | conjugal transfer pilus acetylase TraX | - |
| FNE81_RS23965 () | 7614..12884 | - | 5271 | WP_161619127.1 | Multifunctional conjugation protein TraI | Relaxase |
| FNE81_RS23970 () | 12966..13193 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FNE81_RS23975 () | 13193..13591 | + | 399 | WP_000911315.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FNE81_RS23980 () | 13600..15753 | - | 2154 | WP_161619128.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE81_RS23985 () | 16006..16737 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| FNE81_RS23990 () | 16762..17283 | - | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| FNE81_RS23995 () | 17316..20132 | - | 2817 | WP_161619129.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FNE81_RS24000 () | 20129..21502 | - | 1374 | WP_172949700.1 | conjugal transfer protein TraH | - |
| FNE81_RS24005 () | 21502..21915 | - | 414 | WP_097766393.1 | F-type conjugal transfer protein TrbF | - |
| FNE81_RS24010 () | 21869..22210 | - | 342 | WP_161619130.1 | P-type conjugative transfer protein TrbJ | - |
| FNE81_RS24015 () | 22140..22685 | - | 546 | WP_161619131.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE81_RS24020 () | 22672..22956 | - | 285 | WP_161619132.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE81_RS24025 () | 23037..23351 | + | 315 | Protein_24 | toxin ArtA | - |
| FNE81_RS24030 () | 23353..23700 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| FNE81_RS24035 () | 23716..24459 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE81_RS24040 () | 24452..24709 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| FNE81_RS24045 () | 24736..26544 | - | 1809 | WP_097710798.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FNE81_RS24050 () | 26541..27179 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FNE81_RS24055 () | 27188..28180 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE81_RS24060 () | 28177..28809 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FNE81_RS24065 () | 28806..29192 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| FNE81_RS24070 () | 29189..31816 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| FNE81_RS24075 () | 31976..32197 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FNE81_RS24080 () | 32332..32847 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE81_RS24085 () | 32844..33095 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FNE81_RS24090 () | 33088..33441 | - | 354 | WP_071533315.1 | conjugal transfer protein TrbD | - |
| FNE81_RS24095 () | 33395..33985 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| FNE81_RS24100 () | 33975..35402 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| FNE81_RS24105 () | 35402..36106 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| FNE81_RS24110 () | 36117..36683 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| FNE81_RS24115 () | 36705..37016 | - | 312 | WP_000012126.1 | type IV conjugative transfer system protein TraL | - |
| FNE81_RS24120 () | 37031..37396 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| FNE81_RS24125 () | 37430..37657 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| FNE81_RS24130 () | 37751..38437 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| FNE81_RS24135 () | 38627..39010 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| FNE81_RS24140 () | 39344..39934 | + | 591 | WP_001375132.1 | hypothetical protein | VF |
| FNE81_RS24145 () | 40229..41050 | - | 822 | WP_001234475.1 | DUF945 domain-containing protein | - |
| FNE81_RS24150 () | 41169..41366 | - | 198 | WP_045174704.1 | hypothetical protein | - |
| FNE81_RS24160 () | 42354..42512 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 42577..42775 | - | 199 | NuclAT_0 | - | - |
| - () | 42577..42775 | - | 199 | NuclAT_0 | - | - |
| - () | 42577..42775 | - | 199 | NuclAT_0 | - | - |
| - () | 42577..42775 | - | 199 | NuclAT_0 | - | - |
| FNE81_RS24165 () | 42787..43506 | - | 720 | WP_040072503.1 | plasmid SOS inhibition protein A | - |
| FNE81_RS24170 () | 43503..43937 | - | 435 | WP_000845926.1 | conjugation system SOS inhibitor PsiB | - |
| FNE81_RS24175 () | 43992..45950 | - | 1959 | WP_032219150.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE81_RS24180 () | 46014..46247 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| FNE81_RS24185 () | 46310..46849 | - | 540 | WP_032219151.1 | single-stranded DNA-binding protein | - |
| FNE81_RS24195 () | 47652..47843 | - | 192 | WP_001027497.1 | hypothetical protein | - |
| FNE81_RS24200 () | 47843..48262 | - | 420 | WP_000271711.1 | DUF1380 family protein | - |
| FNE81_RS24205 () | 48309..48611 | - | 303 | WP_001436678.1 | antirestriction protein | - |
| FNE81_RS24215 () | 49151..49921 | - | 771 | WP_178085876.1 | hypothetical protein | - |
| FNE81_RS24220 () | 49966..50400 | - | 435 | WP_040072501.1 | DUF1380 family protein | - |
| FNE81_RS24225 () | 50414..50635 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| FNE81_RS24230 () | 50636..51319 | - | 684 | WP_032219114.1 | DNA methylase | - |
| FNE81_RS24235 () | 51396..51707 | - | 312 | WP_032219116.1 | hypothetical protein | - |
| FNE81_RS24240 () | 51704..52606 | - | 903 | WP_124062600.1 | DUF1281 domain-containing protein | - |
| FNE81_RS24245 () | 53024..53272 | + | 249 | WP_019842136.1 | DinI-like family protein | - |
| FNE81_RS24250 () | 53269..53706 | + | 438 | WP_032219119.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FNE81_RS24255 () | 53706..54976 | + | 1271 | Protein_67 | translesion error-prone DNA polymerase V subunit UmuC | - |
| FNE81_RS24265 () | 54981..55373 | - | 393 | WP_000340833.1 | plasmid partitioning/stability family protein | - |
| FNE81_RS24270 () | 55378..56349 | - | 972 | WP_001103694.1 | hypothetical protein | - |
| FNE81_RS24275 () | 56578..57222 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| FNE81_RS24280 () | 57216..57491 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| FNE81_RS24285 () | 57629..58438 | - | 810 | WP_161619134.1 | site-specific integrase | - |
| FNE81_RS24290 () | 58439..58744 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FNE81_RS24295 () | 58746..58964 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FNE81_RS24300 () | 59919..60122 | - | 204 | Protein_75 | transposase | - |
| FNE81_RS24305 () | 61216..61881 | + | 666 | WP_096934566.1 | PIG-L family deacetylase | - |
| FNE81_RS24310 () | 61892..63088 | + | 1197 | WP_161619135.1 | glycosyltransferase family 2 protein | - |
| FNE81_RS24315 () | 63066..63647 | + | 582 | WP_096934554.1 | Bifunctional protein GlmU | VF |
| FNE81_RS24320 () | 63649..64422 | + | 774 | WP_161619136.1 | YaiO family outer membrane beta-barrel protein | - |
| FNE81_RS24325 () | 65426..65668 | + | 243 | WP_161619137.1 | hypothetical protein | - |
| FNE81_RS24330 () | 65737..66198 | - | 462 | Protein_81 | Leukotoxin export protein LtxD | VF |
| FNE81_RS24335 () | 66494..67489 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| FNE81_RS24340 () | 67493..68425 | + | 933 | WP_096934558.1 | hypothetical protein | - |
| FNE81_RS24345 () | 68745..69014 | + | 270 | WP_096934559.1 | hypothetical protein | - |
| FNE81_RS24350 () | 69002..69598 | + | 597 | WP_096934560.1 | hypothetical protein | - |
| FNE81_RS24355 () | 70379..71356 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| FNE81_RS24360 () | 71641..72381 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| FNE81_RS24365 () | 73127..74350 | - | 1224 | WP_161619144.1 | alpha/beta hydrolase | - |
| FNE81_RS24370 () | 74383..75080 | + | 698 | Protein_89 | IS1 family transposase IS1A | Transposase |
| FNE81_RS24375 () | 75150..75971 | + | 822 | Protein_90 | transposase | - |
| FNE81_RS24380 () | 75956..76282 | - | 327 | Protein_91 | omptin family outer membrane protease | - |
| FNE81_RS24385 () | 76589..77524 | - | 936 | WP_161619138.1 | hypothetical protein | - |
| FNE81_RS24390 () | 77536..78045 | - | 510 | WP_161619139.1 | hypothetical protein | - |
| FNE81_RS24395 () | 78032..78724 | - | 693 | WP_033812880.1 | Chaperone protein FaeE | VF |
| FNE81_RS24400 () | 78717..81131 | - | 2415 | WP_161619140.1 | Outer membrane usher protein YraJ | VF |
| FNE81_RS24405 () | 81246..81761 | - | 516 | WP_161619141.1 | Major MR/P fimbria protein | VF |
| FNE81_RS24410 () | 81900..82169 | - | 270 | WP_161619142.1 | transcriptional regulator | - |
| FNE81_RS24415 () | 82427..83299 | - | 873 | WP_161619143.1 | helix-turn-helix domain-containing protein | - |
| FNE81_RS24600 () | 84130..84878 | + | 749 | Protein_99 | IS3 family transposase ISEc17 | Transposase |
| FNE81_RS24430 () | 84961..85983 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| FNE81_RS24435 () | 85980..86762 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| FNE81_RS24440 () | 86829..87251 | + | 423 | Protein_102 | IS3 family transposase | - |
| FNE81_RS24445 () | 87514..88686 | - | 1173 | WP_096934598.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|