MGE detailed information
MGE type: Conjugative plasmid MGE length: 80029 bp
Accession: NZ_CP041432 Location: 1..80029 Organism: Escherichia coli strain STEC316 Replicon: plasmid pSTEC316
Accession: NZ_CP041432 Location: 1..80029 Organism: Escherichia coli strain STEC316 Replicon: plasmid pSTEC316
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE83_RS25890 () | 6..164 | - | 159 | WP_021545194.1 | hypothetical protein | - |
| FNE83_RS25895 () | 296..853 | - | 558 | Protein_1 | fertility inhibition protein FinO | - |
| FNE83_RS25900 () | 955..1815 | - | 861 | Protein_2 | alpha/beta hydrolase | - |
| FNE83_RS25910 () | 1873..7911 | - | 6039 | Protein_3 | Multifunctional conjugation protein TraI | Relaxase |
| FNE83_RS25915 () | 7993..8220 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FNE83_RS25920 () | 8220..8618 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FNE83_RS25925 () | 8627..10780 | - | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE83_RS25930 () | 11033..11764 | - | 732 | WP_161620838.1 | complement resistance protein TraT | - |
| FNE83_RS25935 () | 11778..12287 | - | 510 | WP_000628105.1 | conjugal transfer entry exclusion protein TraS | - |
| FNE83_RS25940 () | 12284..15109 | - | 2826 | WP_161620839.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FNE83_RS25945 () | 15106..16479 | - | 1374 | WP_094259395.1 | conjugal transfer protein TraH | - |
| FNE83_RS25950 () | 16479..16892 | - | 414 | WP_094259396.1 | F-type conjugal transfer protein TrbF | - |
| FNE83_RS25955 () | 16846..17187 | - | 342 | WP_071836811.1 | P-type conjugative transfer protein TrbJ | - |
| FNE83_RS25960 () | 17117..17662 | - | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE83_RS25965 () | 17649..17930 | - | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE83_RS25970 () | 18046..18789 | - | 744 | WP_040100298.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE83_RS25975 () | 18782..19042 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| FNE83_RS25980 () | 19069..20877 | - | 1809 | WP_040100300.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FNE83_RS25985 () | 20874..21512 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FNE83_RS25990 () | 21521..22513 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE83_RS25995 () | 22510..23142 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FNE83_RS26000 () | 23139..23525 | - | 387 | WP_049033539.1 | type-F conjugative transfer system protein TrbI | - |
| FNE83_RS26005 () | 23522..26149 | - | 2628 | WP_137544633.1 | type IV secretion system protein TraC | - |
| FNE83_RS26010 () | 26309..26530 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FNE83_RS26015 () | 26665..27180 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE83_RS26020 () | 27177..27428 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FNE83_RS26025 () | 27440..27670 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| FNE83_RS26030 () | 27624..28214 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| FNE83_RS26035 () | 28204..29631 | - | 1428 | WP_160391242.1 | conjugal transfer protein TraB | - |
| FNE83_RS26040 () | 29631..30335 | - | 705 | WP_148718882.1 | type-F conjugative transfer system secretin TraK | - |
| FNE83_RS26045 () | 30346..30912 | - | 567 | WP_001717262.1 | type IV conjugative transfer system protein TraE | - |
| FNE83_RS26050 () | 30934..31245 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FNE83_RS26055 () | 31260..31625 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| FNE83_RS26060 () | 31659..31886 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| FNE83_RS26065 () | 31980..32666 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| FNE83_RS26070 () | 32856..33239 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| FNE83_RS26075 () | 33516..34163 | + | 648 | WP_123007297.1 | hypothetical protein | VF |
| FNE83_RS26080 () | 34460..35281 | - | 822 | WP_074014913.1 | DUF945 domain-containing protein | - |
| FNE83_RS26085 () | 35399..35596 | - | 198 | WP_052318758.1 | hypothetical protein | - |
| FNE83_RS26590 () | 36157..36312 | - | 156 | WP_170938106.1 | hypothetical protein | - |
| FNE83_RS26095 () | 36607..36765 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 36809..37033 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36809..37033 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36809..37033 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36809..37033 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| FNE83_RS26100 () | 36845..37033 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| FNE83_RS26105 () | 37045..37764 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| FNE83_RS26110 () | 37761..38195 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| FNE83_RS26115 () | 38250..40208 | - | 1959 | WP_161620594.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE83_RS26120 () | 40274..40507 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| FNE83_RS26125 () | 40570..41109 | - | 540 | WP_161620593.1 | single-stranded DNA-binding protein | - |
| FNE83_RS26595 () | 41135..41341 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| FNE83_RS26135 () | 41582..41830 | - | 249 | WP_074430098.1 | hypothetical protein | - |
| FNE83_RS26140 () | 41981..42544 | - | 564 | WP_042111888.1 | class I SAM-dependent methyltransferase | - |
| FNE83_RS26145 () | 42592..43953 | - | 1362 | Protein_50 | DUF3560 domain-containing protein | - |
| FNE83_RS26150 () | 44044..44235 | - | 192 | WP_096117490.1 | hypothetical protein | - |
| FNE83_RS26600 () | 44901..45056 | - | 156 | WP_001744062.1 | hypothetical protein | - |
| FNE83_RS26155 () | 45270..45461 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| FNE83_RS26160 () | 45458..45880 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| FNE83_RS26165 () | 45927..46229 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| FNE83_RS26175 () | 46769..47539 | - | 771 | WP_001006199.1 | hypothetical protein | - |
| FNE83_RS26180 () | 47584..48018 | - | 435 | WP_000274432.1 | DUF1380 family protein | - |
| FNE83_RS26185 () | 48032..48253 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| FNE83_RS26190 () | 48254..48937 | - | 684 | WP_000085940.1 | DNA methylase | - |
| FNE83_RS26195 () | 49014..49307 | - | 294 | WP_096117507.1 | hypothetical protein | - |
| FNE83_RS26200 () | 49455..50417 | + | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| FNE83_RS26205 () | 50420..50770 | + | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| FNE83_RS26210 () | 50921..51433 | - | 513 | WP_001027529.1 | hypothetical protein | - |
| FNE83_RS26215 () | 51875..53410 | + | 1536 | WP_077170529.1 | pore-forming bacteriocin colicin B | - |
| FNE83_RS26220 () | 53428..53955 | - | 528 | WP_032084022.1 | colicin B immunity protein | - |
| FNE83_RS26225 () | 54199..55014 | + | 816 | WP_032084023.1 | lipid II-degrading bacteriocin colicin M | - |
| FNE83_RS26230 () | 55064..55417 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| FNE83_RS26235 () | 55590..56372 | - | 783 | WP_001164199.1 | site-specific integrase | - |
| FNE83_RS26240 () | 56374..56787 | - | 414 | WP_000465045.1 | hypothetical protein | - |
| FNE83_RS26245 () | 57713..57916 | - | 204 | Protein_70 | transposase | - |
| FNE83_RS26250 () | 58680..59377 | - | 698 | Protein_71 | IS1 family transposase IS1A | Transposase |
| FNE83_RS26255 () | 59783..60706 | + | 924 | WP_032084040.1 | hypothetical protein | - |
| FNE83_RS26260 () | 60990..61424 | + | 435 | Protein_73 | hypothetical protein | - |
| FNE83_RS26265 () | 61442..61788 | - | 347 | Protein_74 | hypothetical protein | - |
| FNE83_RS26270 () | 62058..62339 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| FNE83_RS26275 () | 62445..62720 | - | 276 | WP_032084131.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNE83_RS26280 () | 62720..63004 | - | 285 | WP_032084130.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| FNE83_RS26285 () | 63082..63168 | + | 87 | Protein_78 | ATP-binding protein | - |
| FNE83_RS26290 () | 63240..63365 | + | 126 | Protein_79 | IS256 family transposase | - |
| FNE83_RS26295 () | 63421..64263 | - | 843 | WP_160391234.1 | hypothetical protein | - |
| FNE83_RS26300 () | 64414..64794 | - | 381 | WP_143361631.1 | hypothetical protein | - |
| FNE83_RS26305 () | 64910..65602 | - | 693 | WP_181573844.1 | Chaperone protein FaeE | VF |
| FNE83_RS26310 () | 65595..68006 | - | 2412 | WP_161620840.1 | putative outer membrane usher protein ElfC | VF |
| FNE83_RS26315 () | 68114..68626 | - | 513 | WP_096117498.1 | Major MR/P fimbria protein | VF |
| FNE83_RS26320 () | 68757..69029 | - | 273 | WP_161620442.1 | transcriptional regulator | - |
| FNE83_RS26325 () | 69265..70140 | - | 876 | WP_096117496.1 | helix-turn-helix domain-containing protein | - |
| FNE83_RS26330 () | 70773..71025 | + | 253 | Protein_87 | transposase | - |
| FNE83_RS26335 () | 70988..71680 | + | 693 | Protein_88 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| FNE83_RS26350 () | 73082..74623 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| FNE83_RS26355 () | 74638..75384 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| FNE83_RS26360 () | 75552..75821 | - | 270 | WP_096117481.1 | hypothetical protein | - |
| FNE83_RS26610 () | 75894..76034 | - | 141 | WP_012512742.1 | hypothetical protein | - |
| FNE83_RS26365 () | 76737..77594 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| FNE83_RS26370 () | 77587..77661 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| FNE83_RS26375 () | 77895..78152 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| FNE83_RS26380 () | 78392..78982 | - | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| FNE83_RS26385 () | 79020..79229 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| FNE83_RS26390 () | 79275..79736 | - | 462 | WP_021545193.1 | thermonuclease family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|