MGE detailed information
MGE type: Conjugative plasmid MGE length: 80039 bp
Accession: NZ_CP041430 Location: 1..80039 Organism: Escherichia coli strain STEC367 Replicon: plasmid pSTEC367
Accession: NZ_CP041430 Location: 1..80039 Organism: Escherichia coli strain STEC367 Replicon: plasmid pSTEC367
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE84_RS24780 () | 651..884 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| FNE84_RS24785 () | 947..1486 | - | 540 | WP_161620593.1 | single-stranded DNA-binding protein | - |
| FNE84_RS25420 () | 1512..1718 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| FNE84_RS24795 () | 1959..2213 | - | 255 | WP_135460463.1 | hypothetical protein | - |
| FNE84_RS24800 () | 2364..2927 | - | 564 | WP_042111888.1 | class I SAM-dependent methyltransferase | - |
| FNE84_RS24805 () | 2975..4336 | - | 1362 | Protein_6 | DUF3560 domain-containing protein | - |
| FNE84_RS24810 () | 4427..4618 | - | 192 | WP_096117490.1 | hypothetical protein | - |
| FNE84_RS25425 () | 5284..5439 | - | 156 | WP_001744062.1 | hypothetical protein | - |
| FNE84_RS24815 () | 5653..5844 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| FNE84_RS24820 () | 5841..6263 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| FNE84_RS24825 () | 6310..6612 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| FNE84_RS24835 () | 7152..7922 | - | 771 | WP_001006199.1 | hypothetical protein | - |
| FNE84_RS24840 () | 7967..8401 | - | 435 | WP_000274432.1 | DUF1380 family protein | - |
| FNE84_RS24845 () | 8415..8636 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| FNE84_RS24850 () | 8637..9320 | - | 684 | WP_000085940.1 | DNA methylase | - |
| FNE84_RS24855 () | 9397..9690 | - | 294 | WP_096117507.1 | hypothetical protein | - |
| FNE84_RS24860 () | 9838..10800 | + | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| FNE84_RS24865 () | 10803..11153 | + | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| FNE84_RS24870 () | 11304..11816 | - | 513 | WP_001027529.1 | hypothetical protein | - |
| FNE84_RS24875 () | 12258..13793 | + | 1536 | WP_077170529.1 | pore-forming bacteriocin colicin B | - |
| FNE84_RS24880 () | 13811..14338 | - | 528 | WP_032084022.1 | colicin B immunity protein | - |
| FNE84_RS24885 () | 14582..15397 | + | 816 | WP_032084023.1 | lipid II-degrading bacteriocin colicin M | - |
| FNE84_RS24890 () | 15447..15800 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| FNE84_RS24895 () | 15973..16755 | - | 783 | WP_001164199.1 | site-specific integrase | - |
| FNE84_RS24900 () | 16757..17170 | - | 414 | WP_000465045.1 | hypothetical protein | - |
| FNE84_RS24905 () | 18096..18299 | - | 204 | Protein_26 | transposase | - |
| FNE84_RS24910 () | 19063..19760 | - | 698 | Protein_27 | IS1 family transposase | - |
| FNE84_RS24915 () | 20166..21089 | + | 924 | WP_032084040.1 | hypothetical protein | - |
| FNE84_RS24920 () | 21373..21807 | + | 435 | Protein_29 | hypothetical protein | - |
| FNE84_RS24925 () | 21825..22171 | - | 347 | Protein_30 | hypothetical protein | - |
| FNE84_RS24930 () | 22441..22722 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| FNE84_RS24935 () | 22828..23103 | - | 276 | WP_032084131.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNE84_RS24940 () | 23103..23387 | - | 285 | WP_032084130.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| FNE84_RS24945 () | 23465..23551 | + | 87 | Protein_34 | ATP-binding protein | - |
| FNE84_RS24950 () | 23623..23748 | + | 126 | Protein_35 | IS256 family transposase | - |
| FNE84_RS24955 () | 23804..24646 | - | 843 | WP_160391234.1 | hypothetical protein | - |
| FNE84_RS24960 () | 24797..25177 | - | 381 | WP_143361631.1 | hypothetical protein | - |
| FNE84_RS24965 () | 25293..25985 | - | 693 | WP_181573844.1 | fimbrial chaperone | - |
| FNE84_RS24970 () | 25978..28389 | - | 2412 | WP_161620840.1 | PefC/AfrB family outer membrane usher protein | - |
| FNE84_RS24975 () | 28497..29009 | - | 513 | WP_096117498.1 | fimbrial protein | - |
| FNE84_RS24980 () | 29140..29412 | - | 273 | WP_161620442.1 | transcriptional regulator | - |
| FNE84_RS24985 () | 29648..30523 | - | 876 | WP_096117496.1 | helix-turn-helix domain-containing protein | - |
| FNE84_RS24990 () | 31156..31408 | + | 253 | Protein_43 | transposase | - |
| FNE84_RS24995 () | 31371..32063 | + | 693 | Protein_44 | Tn3 family transposase | - |
| FNE84_RS25010 () | 33465..35006 | + | 1542 | WP_001298859.1 | IS21-like element ISEc12 family transposase | - |
| FNE84_RS25015 () | 35021..35767 | + | 747 | WP_001016257.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| FNE84_RS25020 () | 35935..36204 | - | 270 | WP_096117481.1 | hypothetical protein | - |
| FNE84_RS25435 () | 36277..36417 | - | 141 | WP_012512742.1 | hypothetical protein | - |
| FNE84_RS25025 () | 37120..37977 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| FNE84_RS25030 () | 37970..38044 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| FNE84_RS25035 () | 38278..38535 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| FNE84_RS25040 () | 38775..39365 | - | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| FNE84_RS25045 () | 39403..39612 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| FNE84_RS25050 () | 39658..40119 | - | 462 | WP_021545193.1 | thermonuclease family protein | - |
| FNE84_RS25055 () | 40418..40576 | - | 159 | WP_021545194.1 | hypothetical protein | - |
| FNE84_RS25060 () | 40709..41269 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| FNE84_RS25065 () | 41372..42232 | - | 861 | WP_000704511.1 | alpha/beta hydrolase | - |
| FNE84_RS25070 () | 42291..43037 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| FNE84_RS25075 () | 43057..48327 | - | 5271 | WP_161620837.1 | conjugative transfer relaxase/helicase TraI | - |
| FNE84_RS25080 () | 48409..48636 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FNE84_RS25085 () | 48636..49034 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FNE84_RS25090 () | 49043..51196 | - | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE84_RS25095 () | 51449..52180 | - | 732 | WP_161620838.1 | complement resistance protein TraT | - |
| FNE84_RS25100 () | 52194..52703 | - | 510 | WP_000628105.1 | conjugal transfer entry exclusion protein TraS | - |
| FNE84_RS25105 () | 52700..55525 | - | 2826 | WP_161620839.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FNE84_RS25110 () | 55522..56895 | - | 1374 | WP_094259395.1 | conjugal transfer protein TraH | - |
| FNE84_RS25115 () | 56895..57308 | - | 414 | WP_094259396.1 | F-type conjugal transfer protein TrbF | - |
| FNE84_RS25120 () | 57262..57603 | - | 342 | WP_071836811.1 | P-type conjugative transfer protein TrbJ | - |
| FNE84_RS25125 () | 57533..58078 | - | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE84_RS25130 () | 58065..58346 | - | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE84_RS25135 () | 58462..59205 | - | 744 | WP_040100298.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE84_RS25140 () | 59198..59458 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| FNE84_RS25145 () | 59485..61293 | - | 1809 | WP_040100300.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FNE84_RS25150 () | 61290..61928 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FNE84_RS25155 () | 61937..62929 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE84_RS25160 () | 62926..63558 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FNE84_RS25165 () | 63555..63941 | - | 387 | WP_049033539.1 | type-F conjugative transfer system protein TrbI | - |
| FNE84_RS25170 () | 63938..66565 | - | 2628 | WP_137544633.1 | type IV secretion system protein TraC | - |
| FNE84_RS25175 () | 66725..66946 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FNE84_RS25180 () | 67081..67596 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE84_RS25185 () | 67593..67844 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FNE84_RS25190 () | 67856..68086 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| FNE84_RS25195 () | 68040..68630 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| FNE84_RS25200 () | 68620..70047 | - | 1428 | WP_160391242.1 | conjugal transfer protein TraB | - |
| FNE84_RS25205 () | 70047..70751 | - | 705 | WP_148718882.1 | type-F conjugative transfer system secretin TraK | - |
| FNE84_RS25210 () | 70762..71328 | - | 567 | WP_001717262.1 | type IV conjugative transfer system protein TraE | - |
| FNE84_RS25215 () | 71350..71661 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FNE84_RS25220 () | 71676..72041 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| FNE84_RS25225 () | 72075..72302 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| FNE84_RS25230 () | 72396..73082 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| FNE84_RS25235 () | 73272..73655 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| FNE84_RS25240 () | 73932..74579 | + | 648 | WP_123007297.1 | transglycosylase SLT domain-containing protein | - |
| FNE84_RS25245 () | 74876..75697 | - | 822 | WP_074014913.1 | DUF945 domain-containing protein | - |
| FNE84_RS25250 () | 75815..76012 | - | 198 | WP_052318758.1 | hypothetical protein | - |
| FNE84_RS25440 () | 76573..76728 | - | 156 | WP_170938106.1 | hypothetical protein | - |
| FNE84_RS25260 () | 77023..77181 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 77225..77449 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77225..77449 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77225..77449 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77225..77449 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| FNE84_RS25265 () | 77261..77449 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| FNE84_RS25270 () | 77461..78180 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| FNE84_RS25275 () | 78177..78611 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|