MGE detailed information
MGE type: Conjugative plasmid MGE length: 81110 bp
Accession: NZ_CP041424 Location: 1..81110 Organism: Escherichia coli strain STEC409 Replicon: plasmid pSTEC409_2
Accession: NZ_CP041424 Location: 1..81110 Organism: Escherichia coli strain STEC409 Replicon: plasmid pSTEC409_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE86_RS23365 () | 1226..1441 | + | 216 | WP_178085652.1 | conjugal transfer protein TrbE | - |
| FNE86_RS23370 () | 1434..2177 | + | 744 | WP_062886844.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE86_RS23375 () | 2193..2540 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| FNE86_RS23380 () | 2659..2943 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE86_RS23385 () | 2930..3475 | + | 546 | WP_016236310.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE86_RS23390 () | 3405..3692 | + | 288 | Protein_6 | P-type conjugative transfer protein TrbJ | - |
| FNE86_RS23960 () | 3696..3785 | + | 90 | Protein_7 | conjugal transfer protein TrbF | - |
| FNE86_RS23395 () | 3772..5145 | + | 1374 | WP_021532658.1 | conjugal transfer protein TraH | - |
| FNE86_RS23400 () | 5142..7964 | + | 2823 | WP_033809182.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FNE86_RS23405 () | 7980..8465 | + | 486 | WP_000605868.1 | hypothetical protein | - |
| FNE86_RS23410 () | 8514..9245 | + | 732 | WP_000782454.1 | complement resistance protein TraT | - |
| FNE86_RS23415 () | 9497..11650 | + | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE86_RS23420 () | 11650..16920 | + | 5271 | WP_096117483.1 | Multifunctional conjugation protein TraI | Relaxase |
| FNE86_RS23425 () | 16940..17686 | + | 747 | WP_161620587.1 | conjugal transfer pilus acetylase TraX | - |
| FNE86_RS23430 () | 17745..18605 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| FNE86_RS23435 () | 18708..19268 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| FNE86_RS23440 () | 19401..19559 | + | 159 | WP_021545194.1 | hypothetical protein | - |
| FNE86_RS23445 () | 19858..20319 | + | 462 | WP_021545193.1 | thermonuclease family protein | - |
| FNE86_RS23450 () | 20365..20574 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| FNE86_RS23455 () | 20612..21202 | + | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| FNE86_RS23460 () | 21442..21699 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| FNE86_RS23465 () | 21933..22007 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| FNE86_RS23470 () | 22000..22857 | + | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| FNE86_RS23475 () | 23773..24042 | + | 270 | WP_096117481.1 | hypothetical protein | - |
| FNE86_RS23485 () | 24134..25296 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| FNE86_RS23490 () | 25326..26018 | - | 693 | Protein_26 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| FNE86_RS23495 () | 25981..26233 | - | 253 | Protein_27 | transposase | - |
| FNE86_RS23500 () | 26866..27741 | + | 876 | WP_096117496.1 | helix-turn-helix domain-containing protein | - |
| FNE86_RS23505 () | 27977..28249 | + | 273 | WP_161620442.1 | transcriptional regulator | - |
| FNE86_RS23510 () | 28380..28892 | + | 513 | WP_096117498.1 | Major MR/P fimbria protein | VF |
| FNE86_RS23515 () | 29000..31411 | + | 2412 | WP_161620588.1 | Outer membrane usher protein FimD | VF |
| FNE86_RS23520 () | 31404..32096 | + | 693 | WP_181573844.1 | Chaperone protein FaeE | VF |
| FNE86_RS23525 () | 32212..32592 | + | 381 | WP_143361631.1 | hypothetical protein | - |
| FNE86_RS23530 () | 32743..33588 | + | 846 | WP_161620589.1 | hypothetical protein | - |
| FNE86_RS23535 () | 33644..33769 | - | 126 | Protein_35 | IS256 family transposase | - |
| FNE86_RS23540 () | 33841..33921 | - | 81 | Protein_36 | ATP-binding protein | - |
| FNE86_RS23545 () | 34006..34290 | + | 285 | WP_032084130.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| FNE86_RS23550 () | 34290..34565 | + | 276 | WP_032084131.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNE86_RS23555 () | 34671..34952 | + | 282 | WP_096117502.1 | hypothetical protein | - |
| FNE86_RS23560 () | 35222..35568 | + | 347 | Protein_40 | hypothetical protein | - |
| FNE86_RS23565 () | 35586..36020 | - | 435 | Protein_41 | hypothetical protein | - |
| FNE86_RS23570 () | 36304..37227 | - | 924 | WP_032084040.1 | hypothetical protein | - |
| FNE86_RS23575 () | 38119..38892 | - | 774 | WP_096117503.1 | YaiO family outer membrane beta-barrel protein | - |
| FNE86_RS23580 () | 38894..39475 | - | 582 | WP_096117506.1 | acetyltransferase | - |
| FNE86_RS23585 () | 39453..40649 | - | 1197 | WP_063101977.1 | glycosyltransferase family 2 protein | - |
| FNE86_RS23590 () | 40660..41325 | - | 666 | WP_063101982.1 | PIG-L family deacetylase | - |
| FNE86_RS23595 () | 41738..42435 | + | 698 | Protein_47 | IS1 family transposase IS1A | Transposase |
| FNE86_RS23600 () | 43196..43399 | + | 204 | Protein_48 | transposase | - |
| FNE86_RS23605 () | 44325..44738 | + | 414 | WP_000465045.1 | hypothetical protein | - |
| FNE86_RS24025 () | 44740..45003 | + | 264 | Protein_50 | tyrosine-type recombinase/integrase | - |
| FNE86_RS23610 () | 44998..45496 | + | 499 | Protein_51 | glycosyltransferase family 2 protein | - |
| FNE86_RS23620 () | 45718..46070 | + | 353 | Protein_52 | colicin M immunity protein | - |
| FNE86_RS23625 () | 46120..46935 | - | 816 | WP_032084023.1 | lipid II-degrading bacteriocin colicin M | - |
| FNE86_RS23630 () | 47179..47706 | + | 528 | WP_032084022.1 | colicin B immunity protein | - |
| FNE86_RS23635 () | 47724..49259 | - | 1536 | WP_077170529.1 | pore-forming bacteriocin colicin B | - |
| FNE86_RS23640 () | 49700..50212 | + | 513 | WP_001027529.1 | hypothetical protein | - |
| FNE86_RS23645 () | 50363..50713 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| FNE86_RS23650 () | 50716..51678 | - | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| FNE86_RS23655 () | 51826..52119 | + | 294 | WP_096117507.1 | hypothetical protein | - |
| FNE86_RS23660 () | 52196..52879 | + | 684 | WP_000085940.1 | DNA methylase | - |
| FNE86_RS23665 () | 52880..53101 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| FNE86_RS23670 () | 53115..53549 | + | 435 | WP_000274432.1 | DUF1380 family protein | - |
| FNE86_RS23675 () | 53594..54364 | + | 771 | WP_001006199.1 | hypothetical protein | - |
| FNE86_RS23685 () | 54904..55206 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| FNE86_RS23690 () | 55253..55675 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| FNE86_RS23695 () | 55672..55863 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| FNE86_RS23970 () | 56077..56232 | + | 156 | WP_001744062.1 | hypothetical protein | - |
| FNE86_RS23700 () | 56898..57089 | + | 192 | WP_096117490.1 | hypothetical protein | - |
| FNE86_RS23705 () | 57180..58541 | + | 1362 | Protein_69 | DUF3560 domain-containing protein | - |
| FNE86_RS23710 () | 58589..59152 | + | 564 | WP_042111888.1 | class I SAM-dependent methyltransferase | - |
| FNE86_RS23715 () | 59178..59417 | + | 240 | WP_094326110.1 | hypothetical protein | - |
| FNE86_RS23975 () | 59432..59587 | + | 156 | WP_170938106.1 | hypothetical protein | - |
| FNE86_RS23980 () | 59580..59915 | + | 336 | WP_077763704.1 | hypothetical protein | - |
| FNE86_RS23985 () | 59828..60034 | + | 207 | WP_000275853.1 | hypothetical protein | - |
| FNE86_RS23730 () | 60060..60599 | + | 540 | WP_161620593.1 | single-stranded DNA-binding protein | - |
| FNE86_RS23735 () | 60662..60895 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| FNE86_RS23740 () | 60961..62919 | + | 1959 | WP_161620594.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE86_RS23745 () | 62974..63408 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| FNE86_RS23750 () | 63405..64124 | + | 720 | WP_161620595.1 | plasmid SOS inhibition protein A | - |
| FNE86_RS23755 () | 64136..64324 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 64136..64360 | + | 225 | NuclAT_0 | - | - |
| - () | 64136..64360 | + | 225 | NuclAT_0 | - | - |
| - () | 64136..64360 | + | 225 | NuclAT_0 | - | - |
| - () | 64136..64360 | + | 225 | NuclAT_0 | - | - |
| - () | 64292..64355 | - | 64 | - | - | - |
| FNE86_RS23760 () | 64404..64562 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| FNE86_RS23990 () | 64857..65012 | + | 156 | WP_170938106.1 | hypothetical protein | - |
| FNE86_RS23770 () | 65573..65770 | + | 198 | WP_052318758.1 | hypothetical protein | - |
| FNE86_RS23775 () | 65888..66709 | + | 822 | WP_074014913.1 | DUF945 domain-containing protein | - |
| FNE86_RS23780 () | 67006..67608 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| FNE86_RS23785 () | 67929..68312 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| FNE86_RS23790 () | 68499..69188 | + | 690 | WP_021532962.1 | conjugal transfer transcriptional regulator TraJ | - |
| FNE86_RS23795 () | 69287..69682 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| FNE86_RS23800 () | 69715..70080 | + | 366 | WP_000994782.1 | type IV conjugative transfer system pilin TraA | - |
| FNE86_RS23805 () | 70095..70406 | + | 312 | WP_000012126.1 | type IV conjugative transfer system protein TraL | - |
| FNE86_RS23810 () | 70428..70994 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| FNE86_RS23815 () | 71005..71709 | + | 705 | WP_148722991.1 | type-F conjugative transfer system secretin TraK | - |
| FNE86_RS23820 () | 71709..73136 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| FNE86_RS23825 () | 73126..73716 | + | 591 | WP_062886847.1 | conjugal transfer protein TraP | - |
| FNE86_RS23830 () | 73670..73900 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| FNE86_RS23835 () | 73912..74163 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FNE86_RS23840 () | 74160..74675 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE86_RS23845 () | 74810..75031 | + | 222 | WP_072113546.1 | conjugal transfer protein TraR | - |
| FNE86_RS23850 () | 75191..77818 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| FNE86_RS23855 () | 77815..78201 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| FNE86_RS23860 () | 78198..78830 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FNE86_RS23865 () | 78827..79819 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE86_RS23870 () | 79828..80466 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|