MGE detailed information
MGE type: Conjugative plasmid MGE length: 85426 bp
Accession: NZ_CP041415 Location: 1..85426 Organism: Escherichia coli strain STEC719 Replicon: plasmid pSTEC719_4
Accession: NZ_CP041415 Location: 1..85426 Organism: Escherichia coli strain STEC719 Replicon: plasmid pSTEC719_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE88_RS25270 () | 1610..2095 | + | 486 | WP_000605866.1 | hypothetical protein | - |
| FNE88_RS25275 () | 2144..2329 | + | 186 | WP_161622515.1 | hypothetical protein | - |
| FNE88_RS25280 () | 2337..2877 | + | 541 | Protein_3 | complement resistance protein TraT | - |
| FNE88_RS25285 () | 3130..5319 | + | 2190 | WP_161622516.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE88_RS25290 () | 5328..5726 | - | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FNE88_RS25295 () | 5726..5953 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FNE88_RS25300 () | 6035..11305 | + | 5271 | WP_161622517.1 | Multifunctional conjugation protein TraI | Relaxase |
| FNE88_RS25305 () | 11325..12071 | + | 747 | WP_136769175.1 | conjugal transfer pilus acetylase TraX | - |
| FNE88_RS25310 () | 12126..12686 | + | 561 | WP_001587438.1 | fertility inhibition protein FinO | - |
| FNE88_RS25315 () | 12822..13019 | + | 198 | WP_097464675.1 | hypothetical protein | - |
| FNE88_RS25965 () | 13210..13284 | + | 75 | Protein_11 | endonuclease | - |
| - () | 13540..13601 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 13540..13601 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 13540..13601 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 13540..13601 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| FNE88_RS25320 () | 13588..13794 | + | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| FNE88_RS25325 () | 14078..14335 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| FNE88_RS25330 () | 14567..14641 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| FNE88_RS25335 () | 14634..15116 | + | 483 | WP_001523473.1 | hypothetical protein | - |
| FNE88_RS25340 () | 15109..15966 | + | 858 | WP_161622518.1 | incFII family plasmid replication initiator RepA | - |
| FNE88_RS25345 () | 16137..16814 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FNE88_RS25350 () | 16814..17161 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FNE88_RS25355 () | 17181..18752 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| FNE88_RS25365 () | 19587..19856 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| FNE88_RS25370 () | 19853..20134 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNE88_RS25375 () | 20398..21570 | + | 1173 | WP_161622519.1 | hypothetical protein | - |
| FNE88_RS25380 () | 21673..22584 | + | 912 | WP_136769172.1 | hypothetical protein | VF |
| FNE88_RS25385 () | 22726..23121 | - | 396 | WP_096934596.1 | plasmid partitioning/stability family protein | - |
| FNE88_RS25390 () | 23121..23671 | - | 551 | Protein_25 | plasmid stabilization protein | - |
| FNE88_RS25395 () | 23665..23886 | + | 222 | WP_077775928.1 | hypothetical protein | - |
| FNE88_RS25400 () | 23908..24243 | - | 336 | WP_161620440.1 | colicin transporter | - |
| FNE88_RS25405 () | 24372..24719 | + | 348 | WP_033812875.1 | hypothetical protein | - |
| FNE88_RS25410 () | 24991..25215 | + | 225 | WP_096934602.1 | hypothetical protein | - |
| FNE88_RS25415 () | 25212..25469 | + | 258 | WP_178085956.1 | hypothetical protein | - |
| FNE88_RS25430 () | 27490..28365 | + | 876 | WP_161620441.1 | helix-turn-helix domain-containing protein | - |
| FNE88_RS25435 () | 28601..28873 | + | 273 | WP_161620442.1 | transcriptional regulator | - |
| FNE88_RS25440 () | 29004..29516 | + | 513 | WP_161620443.1 | Major MR/P fimbria protein | VF |
| FNE88_RS25445 () | 29624..32035 | + | 2412 | WP_161620444.1 | putative outer membrane usher protein ElfC | VF |
| FNE88_RS25450 () | 32028..32720 | + | 693 | WP_161620445.1 | Chaperone protein FaeE | VF |
| FNE88_RS25455 () | 32707..33216 | + | 510 | WP_135497828.1 | hypothetical protein | - |
| FNE88_RS25460 () | 33229..34182 | + | 954 | WP_161622520.1 | hypothetical protein | - |
| FNE88_RS25465 () | 34476..34751 | + | 276 | Protein_39 | Outer membrane protease OmpP | VF |
| FNE88_RS25470 () | 34787..35106 | - | 320 | Protein_40 | Outer membrane protease OmpP | VF |
| FNE88_RS25475 () | 35135..36634 | + | 1500 | WP_170998748.1 | alpha/beta hydrolase | - |
| FNE88_RS25480 () | 37005..37265 | + | 261 | Protein_42 | hypothetical protein | - |
| FNE88_RS25485 () | 37386..38126 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| FNE88_RS25490 () | 38405..39382 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| FNE88_RS25495 () | 40150..41253 | + | 1104 | WP_024193808.1 | hypothetical protein | - |
| FNE88_RS25500 () | 41271..41618 | - | 348 | WP_001604436.1 | hypothetical protein | - |
| FNE88_RS25505 () | 41737..42084 | + | 348 | WP_001775009.1 | hypothetical protein | - |
| FNE88_RS25970 () | 42102..42263 | - | 162 | WP_000251882.1 | hypothetical protein | - |
| FNE88_RS25510 () | 42507..46328 | + | 3822 | WP_032232022.1 | hypothetical protein | - |
| FNE88_RS25515 () | 46885..47103 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FNE88_RS25520 () | 47105..47410 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FNE88_RS25525 () | 47411..48217 | + | 807 | WP_024243979.1 | site-specific integrase | - |
| FNE88_RS25530 () | 48264..48908 | + | 645 | WP_001477618.1 | replication initiation protein RepE | - |
| FNE88_RS25535 () | 49496..50662 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| FNE88_RS25540 () | 50662..51633 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FNE88_RS25975 () | 52371..53273 | + | 903 | Protein_56 | DUF1281 domain-containing protein | - |
| FNE88_RS25555 () | 53277..53582 | + | 306 | WP_010892536.1 | hypothetical protein | - |
| FNE88_RS25560 () | 53659..54342 | + | 684 | WP_063069767.1 | DNA methylase | - |
| FNE88_RS25565 () | 54343..54564 | + | 222 | WP_001104904.1 | hypothetical protein | - |
| FNE88_RS25570 () | 54458..55012 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| FNE88_RS25980 () | 55058..55834 | + | 777 | WP_001005032.1 | hypothetical protein | - |
| FNE88_RS25585 () | 56371..56673 | + | 303 | WP_072095193.1 | antirestriction protein | - |
| FNE88_RS25590 () | 56720..57142 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| FNE88_RS25595 () | 57139..57330 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| FNE88_RS25985 () | 57300..57809 | - | 510 | WP_071600123.1 | hypothetical protein | - |
| FNE88_RS25605 () | 58127..58666 | + | 540 | WP_000290791.1 | single-stranded DNA-binding protein | - |
| FNE88_RS25610 () | 58729..58962 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| FNE88_RS25615 () | 59028..60986 | + | 1959 | WP_023148339.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE88_RS25620 () | 61041..61475 | + | 435 | WP_000845934.1 | conjugation system SOS inhibitor PsiB | - |
| FNE88_RS25625 () | 61472..62191 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| FNE88_RS25630 () | 62203..62391 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 62203..62427 | + | 225 | NuclAT_0 | - | - |
| - () | 62203..62427 | + | 225 | NuclAT_0 | - | - |
| - () | 62203..62427 | + | 225 | NuclAT_0 | - | - |
| - () | 62203..62427 | + | 225 | NuclAT_0 | - | - |
| - () | 62360..62425 | + | 66 | - | - | Antitoxin Detail |
| FNE88_RS25635 () | 62471..62629 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| FNE88_RS25645 () | 63551..63838 | + | 288 | WP_161622521.1 | hypothetical protein | - |
| FNE88_RS25650 () | 63956..64777 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| FNE88_RS25655 () | 65074..65664 | - | 591 | WP_165899088.1 | hypothetical protein | VF |
| FNE88_RS25660 () | 66015..66398 | + | 384 | WP_001063021.1 | relaxosome protein TraM | - |
| FNE88_RS25665 () | 66589..67236 | + | 648 | WP_000332519.1 | conjugal transfer transcriptional regulator TraJ | - |
| FNE88_RS25670 () | 67372..67587 | + | 216 | WP_000086381.1 | conjugal transfer relaxosome protein TraY | - |
| FNE88_RS25675 () | 67630..68028 | + | 399 | WP_000340281.1 | type IV conjugative transfer system pilin TraA | - |
| FNE88_RS25680 () | 68043..68354 | + | 312 | WP_097418970.1 | type IV conjugative transfer system protein TraL | - |
| FNE88_RS25685 () | 68376..68942 | + | 567 | WP_000399797.1 | type IV conjugative transfer system protein TraE | - |
| FNE88_RS25690 () | 68953..69657 | + | 705 | WP_157918810.1 | type-F conjugative transfer system secretin TraK | - |
| FNE88_RS25695 () | 69657..71084 | + | 1428 | WP_000146655.1 | conjugal transfer protein TraB | - |
| FNE88_RS25700 () | 71074..71664 | + | 591 | WP_001523507.1 | conjugal transfer protein TraP | - |
| FNE88_RS25705 () | 71618..71848 | + | 231 | WP_001398289.1 | conjugal transfer protein TrbD | - |
| FNE88_RS25710 () | 71860..72111 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FNE88_RS25715 () | 72108..72623 | + | 516 | WP_025269857.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE88_RS25720 () | 72758..72979 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FNE88_RS25725 () | 73139..75766 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| FNE88_RS25730 () | 75763..76149 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| FNE88_RS25735 () | 76146..76778 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FNE88_RS25740 () | 76775..77767 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE88_RS25745 () | 77776..78414 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FNE88_RS25750 () | 78411..80219 | + | 1809 | WP_161622522.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FNE88_RS25755 () | 80246..80503 | + | 258 | WP_000864336.1 | conjugal transfer protein TrbE | - |
| FNE88_RS25760 () | 80496..81239 | + | 744 | WP_001030381.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE88_RS25765 () | 81255..81602 | + | 348 | WP_001287897.1 | conjugal transfer protein TrbA | - |
| FNE88_RS25770 () | 81720..82004 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE88_RS25775 () | 81991..82536 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE88_RS25780 () | 82466..82828 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| FNE88_RS25785 () | 82828..84201 | + | 1374 | WP_001523491.1 | conjugal transfer protein TraH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|