MGE detailed information
MGE type: Conjugative plasmid MGE length: 96497 bp
Accession: NZ_CP041111 Location: 1..96497 Organism: Escherichia coli strain ECCTRSRTH03 Replicon: plasmid unnamed1
Accession: NZ_CP041111 Location: 1..96497 Organism: Escherichia coli strain ECCTRSRTH03 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CI675_RS22535 () | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| CI675_RS22540 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| CI675_RS22545 () | 2124..2291 | - | 168 | WP_063078056.1 | hypothetical protein | - |
| CI675_RS22550 () | 2406..2816 | - | 411 | Protein_3 | IS3 family transposase ISEhe3 | Transposase |
| CI675_RS22555 () | 2879..3583 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CI675_RS22565 () | 3727..4368 | - | 642 | WP_001011939.1 | Chloramphenicol acetyltransferase 2 | ARG |
| CI675_RS22570 () | 4464..5168 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CI675_RS22575 () | 5223..5510 | + | 288 | Protein_7 | transposase | - |
| CI675_RS22580 () | 5766..6641 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| CI675_RS22585 () | 6688..7020 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CI675_RS22590 () | 7034..9829 | + | 2796 | Protein_10 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CI675_RS22595 () | 10024..10587 | + | 564 | WP_001515734.1 | IS66 family transposase ISPpu13 | Transposase |
| CI675_RS22600 () | 10652..11026 | + | 375 | WP_001348195.1 | cupin domain-containing protein | - |
| CI675_RS22610 () | 11119..11823 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CI675_RS22615 () | 11874..12239 | - | 366 | Protein_14 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| CI675_RS22620 () | 12376..12966 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| CI675_RS22625 () | 13050..13502 | - | 453 | Protein_16 | MFS transporter | - |
| CI675_RS22630 () | 13499..14404 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| CI675_RS22640 () | 14526..15230 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CI675_RS22645 () | 15364..16227 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| CI675_RS22650 () | 16373..16612 | - | 240 | WP_011264039.1 | macrolide transporter | - |
| CI675_RS22655 () | 16674..17201 | - | 528 | Protein_21 | IS6 family transposase IS26 | Transposase |
| CI675_RS22665 () | 17255..17959 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CI675_RS24930 () | 18195..18536 | - | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| CI675_RS22675 () | 18497..18946 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| CI675_RS24935 () | 19461..19631 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| CI675_RS22685 () | 19576..20313 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| CI675_RS22690 () | 20439..20534 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| CI675_RS22695 () | 20669..21373 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CI675_RS22700 () | 21426..21941 | - | 516 | Protein_29 | IS4 family transposase IS10R | Transposase |
| CI675_RS22710 () | 22084..22944 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| CI675_RS22715 () | 22957..23499 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| CI675_RS22720 () | 23981..24172 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| CI675_RS22725 () | 24196..24423 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| CI675_RS22730 () | 24474..25601 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| CI675_RS22735 () | 25638..26342 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CI675_RS22740 () | 26394..26972 | + | 579 | Protein_36 | Methyl-accepting chemotaxis protein McpP | VF |
| CI675_RS22755 () | 28065..28922 | - | 858 | WP_039002220.1 | incFII family plasmid replication initiator RepA | - |
| CI675_RS22760 () | 28915..28989 | - | 75 | WP_061357229.1 | RepA leader peptide Tap | - |
| CI675_RS22770 () | 29221..29478 | - | 258 | WP_001541895.1 | replication regulatory protein RepA | - |
| CI675_RS22775 () | 29746..29952 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 29939..30000 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29939..30000 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29939..30000 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29939..30000 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| CI675_RS22785 () | 30342..30554 | - | 213 | WP_001541896.1 | ANR family transcriptional regulator | - |
| CI675_RS22790 () | 30689..31249 | - | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| CI675_RS22795 () | 31304..32047 | - | 744 | WP_039002216.1 | conjugal transfer pilus acetylase TraX | - |
| CI675_RS22800 () | 32067..37337 | - | 5271 | WP_054377139.1 | Multifunctional conjugation protein TraI | Relaxase |
| CI675_RS22805 () | 37337..39517 | - | 2181 | WP_063078088.1 | type IV conjugative transfer system coupling protein TraD | - |
| CI675_RS22810 () | 39770..40501 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| CI675_RS22815 () | 40533..41036 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| CI675_RS22820 () | 41051..43873 | - | 2823 | WP_001007048.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CI675_RS22825 () | 43870..45243 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| CI675_RS22830 () | 45243..45605 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| CI675_RS22835 () | 45535..46080 | - | 546 | WP_000052613.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CI675_RS22840 () | 46067..46348 | - | 282 | WP_039002206.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CI675_RS22845 () | 46464..47207 | - | 744 | WP_039002205.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CI675_RS22850 () | 47200..47460 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| CI675_RS22855 () | 47487..49295 | - | 1809 | WP_000821844.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CI675_RS22860 () | 49292..49930 | - | 639 | WP_000777691.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CI675_RS22865 () | 49939..50931 | - | 993 | WP_023148235.1 | conjugal transfer pilus assembly protein TraU | - |
| CI675_RS22870 () | 50928..51560 | - | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| CI675_RS22875 () | 51557..51943 | - | 387 | WP_039002198.1 | type-F conjugative transfer system protein TrbI | - |
| CI675_RS22880 () | 51940..54567 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| CI675_RS22885 () | 54727..54948 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| CI675_RS22890 () | 55083..55598 | - | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CI675_RS22895 () | 55595..55963 | - | 369 | WP_077254276.1 | conjugal transfer protein TrbD | - |
| CI675_RS22900 () | 55902..56489 | - | 588 | WP_000002772.1 | conjugal transfer protein TraP | - |
| CI675_RS22905 () | 56479..57906 | - | 1428 | WP_000146690.1 | conjugal transfer protein TraB | - |
| CI675_RS22910 () | 57906..58610 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CI675_RS22915 () | 58621..59187 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| CI675_RS22920 () | 59209..59520 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CI675_RS22925 () | 59525..59887 | - | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| CI675_RS22930 () | 59920..60315 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| CI675_RS22935 () | 60414..61103 | - | 690 | WP_039002187.1 | conjugal transfer transcriptional regulator TraJ | - |
| CI675_RS22940 () | 61290..61673 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| CI675_RS22945 () | 61993..62595 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| CI675_RS22950 () | 62892..63713 | - | 822 | WP_072795862.1 | DUF945 domain-containing protein | - |
| CI675_RS22955 () | 63835..64122 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| CI675_RS22975 () | 65044..65202 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 65246..65470 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 65246..65470 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 65246..65470 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 65246..65470 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| CI675_RS24940 () | 65282..65470 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| CI675_RS22980 () | 65482..66201 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| CI675_RS22985 () | 66198..66632 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| CI675_RS22990 () | 66687..68645 | - | 1959 | WP_039000998.1 | ParB/RepB/Spo0J family partition protein | - |
| CI675_RS22995 () | 68710..68943 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| CI675_RS23000 () | 69000..69539 | - | 540 | WP_032332913.1 | single-stranded DNA-binding protein | - |
| CI675_RS23005 () | 69565..69771 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| CI675_RS23025 () | 70391..70954 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| CI675_RS23030 () | 71002..72363 | - | 1362 | WP_038999961.1 | DUF3560 domain-containing protein | - |
| CI675_RS23035 () | 72415..72645 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| CI675_RS23045 () | 73680..73871 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| CI675_RS23050 () | 73868..74291 | - | 424 | Protein_88 | DUF1380 domain-containing protein | - |
| CI675_RS23055 () | 74338..74640 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| CI675_RS23065 () | 75180..75956 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| CI675_RS23070 () | 76007..76441 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| CI675_RS23075 () | 76455..76676 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| CI675_RS23080 () | 76677..77360 | - | 684 | WP_000086185.1 | DNA methylase | - |
| CI675_RS23085 () | 77437..77741 | - | 305 | Protein_94 | hypothetical protein | - |
| CI675_RS23090 () | 77745..78647 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| CI675_RS23100 () | 79065..79313 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CI675_RS23105 () | 79310..79747 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CI675_RS23110 () | 79747..81018 | + | 1272 | WP_000457518.1 | Y-family DNA polymerase | - |
| CI675_RS23115 () | 81023..81415 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| CI675_RS23120 () | 81420..82391 | - | 972 | WP_001103690.1 | hypothetical protein | - |
| CI675_RS23125 () | 82613..83257 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| CI675_RS23130 () | 83251..83526 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| CI675_RS23135 () | 83678..84454 | - | 777 | Protein_103 | site-specific integrase | - |
| CI675_RS23140 () | 84451..84882 | - | 432 | WP_001707302.1 | hypothetical protein | - |
| CI675_RS23145 () | 84948..85652 | + | 705 | WP_065304467.1 | IS6 family transposase IS26 | Transposase |
| CI675_RS23150 () | 85801..87126 | - | 1326 | WP_021512928.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| CI675_RS23155 () | 87236..87933 | + | 698 | Protein_107 | IS1 family transposase IS1R | Transposase |
| CI675_RS23160 () | 88034..88315 | - | 282 | WP_000639434.1 | hypothetical protein | - |
| CI675_RS23165 () | 88417..89313 | - | 897 | Protein_109 | IS3 family transposase ISEhe3 | Transposase |
| CI675_RS23170 () | 89378..90196 | + | 819 | Protein_110 | IS30 family transposase IS30D | Transposase |
| CI675_RS23180 () | 91504..91680 | + | 177 | Protein_112 | IS30 family transposase | - |
| CI675_RS23190 () | 92105..92389 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| CI675_RS23195 () | 92409..93542 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| CI675_RS23200 () | 93608..94305 | - | 698 | Protein_115 | IS1 family transposase IS1R | Transposase |
| CI675_RS23205 () | 94363..94611 | + | 249 | Protein_116 | abortive infection family protein | - |
| CI675_RS23210 () | 94900..95712 | - | 813 | WP_032333019.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|