MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93930 bp
Accession: NZ_CP040901 Location: 1..93930 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SAP18-6199 Replicon: plasmid pCFSAN074387
Accession: NZ_CP040901 Location: 1..93930 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SAP18-6199 Replicon: plasmid pCFSAN074387
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FF984_RS23640 () | 37..936 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| FF984_RS23645 () | 933..1079 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| FF984_RS23650 () | 1069..1722 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| FF984_RS23655 () | 1967..2317 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| FF984_RS23660 () | 2302..2514 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| FF984_RS23665 () | 2946..3821 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| FF984_RS23670 () | 4074..4631 | - | 558 | WP_010999940.1 | membrane protein | - |
| FF984_RS23675 () | 4646..5338 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| FF984_RS23680 () | 5331..7739 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| FF984_RS23685 () | 7967..8485 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| FF984_RS23690 () | 8760..9062 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| FF984_RS23700 () | 9781..10162 | + | 382 | Protein_11 | YgiW/YdeI family stress tolerance OB fold protein | - |
| FF984_RS23705 () | 10331..10775 | + | 445 | Protein_12 | site-specific integrase | - |
| FF984_RS23710 () | 11034..12023 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| FF984_RS23715 () | 12517..12813 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| FF984_RS23725 () | 13297..13818 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| FF984_RS23730 () | 14494..14712 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FF984_RS23735 () | 14714..15019 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FF984_RS23740 () | 15021..15311 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| FF984_RS23745 () | 15308..15829 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| FF984_RS23750 () | 15864..16646 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| FF984_RS23755 () | 16655..17368 | + | 714 | Protein_21 | EAL domain-containing protein | - |
| FF984_RS23765 () | 17372..17881 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| FF984_RS23770 () | 17875..18360 | + | 486 | WP_000905606.1 | membrane protein | - |
| FF984_RS23775 () | 18637..18924 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| FF984_RS23780 () | 19080..19640 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| FF984_RS23785 () | 19707..20057 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| FF984_RS23790 () | 20114..20538 | + | 425 | Protein_27 | IS200/IS605 family transposase | - |
| FF984_RS23795 () | 20665..21315 | - | 651 | WP_140232054.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| FF984_RS23800 () | 21576..22301 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| FF984_RS23805 () | 22582..24357 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| FF984_RS24335 () | 24409..24576 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| FF984_RS23810 () | 24539..25306 | - | 768 | WP_023892969.1 | virulence protein SpvA | - |
| FF984_RS23815 () | 25480..25644 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| FF984_RS23820 () | 25818..26711 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| FF984_RS24340 () | 26682..26793 | - | 112 | Protein_35 | transcriptional activator | - |
| FF984_RS23825 () | 27319..28356 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| FF984_RS23830 () | 28545..29570 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| FF984_RS23835 () | 29503..31167 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| FF984_RS23840 () | 31151..31711 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| FF984_RS23845 () | 31918..32658 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| FF984_RS23855 () | 33313..33801 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| FF984_RS23860 () | 34060..35175 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| FF984_RS23865 () | 35261..35677 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| FF984_RS23870 () | 35861..36196 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| FF984_RS23875 () | 36253..36819 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| FF984_RS23880 () | 36851..37792 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| FF984_RS23885 () | 38207..39412 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| FF984_RS23890 () | 39412..40386 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| FF984_RS23895 () | 40468..41742 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| FF984_RS23900 () | 41742..42164 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FF984_RS23905 () | 42675..43145 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| FF984_RS23910 () | 43138..43494 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| FF984_RS23920 () | 43876..44556 | + | 681 | WP_000088645.1 | DNA methylase | - |
| FF984_RS23925 () | 44556..44777 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| FF984_RS23930 () | 44833..45246 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| FF984_RS23935 () | 45318..46082 | + | 765 | WP_001246548.1 | membrane protein | - |
| FF984_RS23945 () | 46578..47012 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| FF984_RS23950 () | 47079..47513 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| FF984_RS23955 () | 47749..48072 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| FF984_RS23965 () | 48773..49291 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| FF984_RS23970 () | 49346..49588 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| FF984_RS23975 () | 49657..51654 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| FF984_RS23980 () | 51694..52128 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| FF984_RS23985 () | 52125..52862 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| FF984_RS24345 () | 53111..53269 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| FF984_RS24350 () | 53372..54190 | + | 819 | Protein_66 | DUF945 domain-containing protein | - |
| FF984_RS24000 () | 54501..54971 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| FF984_RS24010 () | 55386..55766 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| FF984_RS24015 () | 55959..56645 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| FF984_RS24020 () | 56739..56966 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| FF984_RS24025 () | 57008..57370 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| FF984_RS24030 () | 57385..57696 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| FF984_RS24035 () | 57718..58284 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| FF984_RS24040 () | 58271..59011 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| FF984_RS24045 () | 59011..60432 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| FF984_RS24050 () | 60422..61018 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| FF984_RS24055 () | 60996..61241 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| FF984_RS24060 () | 61238..61753 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FF984_RS24065 () | 61888..62109 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| FF984_RS24070 () | 62102..62569 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| FF984_RS24075 () | 62686..62949 | + | 264 | WP_001239256.1 | hypothetical protein | - |
| FF984_RS24080 () | 62965..65613 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| FF984_RS24085 () | 65588..65974 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| FF984_RS24090 () | 65971..66603 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| FF984_RS24095 () | 66600..67592 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| FF984_RS24100 () | 67611..67919 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| FF984_RS24105 () | 67904..68542 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FF984_RS24110 () | 68579..68998 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| FF984_RS24115 () | 68995..70821 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FF984_RS24120 () | 70832..71047 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| FF984_RS24125 () | 71059..71808 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FF984_RS24130 () | 72022..72315 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FF984_RS24135 () | 72302..72850 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FF984_RS24140 () | 72840..74222 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| FF984_RS24145 () | 74219..77041 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FF984_RS24150 () | 77057..77551 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| FF984_RS24155 () | 77587..78318 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| FF984_RS24160 () | 78695..80956 | + | 2262 | WP_015589607.1 | type IV conjugative transfer system coupling protein TraD | - |
| FF984_RS24165 () | 80965..81363 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FF984_RS24170 () | 81363..81590 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FF984_RS24175 () | 81672..86930 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| FF984_RS24180 () | 86950..87690 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| FF984_RS24185 () | 87745..88308 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| FF984_RS24190 () | 88423..88707 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| FF984_RS24195 () | 88720..88875 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| FF984_RS24200 () | 89041..89483 | + | 443 | Protein_106 | phospholipase | - |
| FF984_RS24210 () | 89662..89928 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| FF984_RS24215 () | 90178..90255 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| FF984_RS24220 () | 90236..91117 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| FF984_RS24230 () | 91977..92198 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| FF984_RS24235 () | 92295..93053 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| FF984_RS24240 () | 93320..93877 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|