MGE detailed information
MGE type: Prophage MGE length: 38920 bp
Accession: NZ_CP040622 Location: 1921444..1960363 Organism: Staphylococcus aureus strain JKD6004 Replicon: chromosome
Accession: NZ_CP040622 Location: 1921444..1960363 Organism: Staphylococcus aureus strain JKD6004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FF958_RS09455 () | 1917257..1918003 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| FF958_RS09460 () | 1918008..1918481 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| FF958_RS09465 () | 1918547..1918804 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| FF958_RS09470 () | 1918801..1919802 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| FF958_RS09475 () | 1919807..1921285 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| FF958_RS09480 () | 1921444..1921899 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| FF958_RS09485 () | 1922202..1922852 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| FF958_RS09490 () | 1922933..1923928 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| FF958_RS09495 () | 1924004..1924630 | + | 627 | WP_000669046.1 | hypothetical protein | - |
| FF958_RS09500 () | 1924671..1925015 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| FF958_RS09505 () | 1925113..1925664 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| FF958_RS09510 () | 1925882..1926523 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| FF958_RS09515 () | 1926637..1926822 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| FF958_RS09520 () | 1926824..1927000 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| FF958_RS09525 () | 1927011..1927394 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| FF958_RS09535 () | 1927998..1928141 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| FF958_RS09545 () | 1928344..1928439 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1928467..1928526 | - | 60 | - | - | Antitoxin Detail |
| FF958_RS09550 () | 1928562..1928663 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| FF958_RS09555 () | 1928641..1928817 | - | 177 | Protein_1831 | transposase | - |
| FF958_RS09560 () | 1929011..1929388 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| FF958_RS09565 () | 1929909..1934021 | - | 4113 | WP_000831218.1 | ATP-binding protein | - |
| FF958_RS09570 () | 1934871..1936070 | - | 1200 | WP_000072576.1 | restriction endonuclease subunit S | - |
| FF958_RS09575 () | 1936063..1937619 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| FF958_RS09580 () | 1937783..1937917 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| FF958_RS09585 () | 1937982..1938701 | - | 720 | WP_001038688.1 | hypothetical protein | VF |
| FF958_RS09590 () | 1938852..1939568 | - | 717 | WP_001038759.1 | hypothetical protein | VF |
| FF958_RS09595 () | 1939670..1939777 | + | 108 | Protein_1839 | hypothetical protein | - |
| FF958_RS09600 () | 1939726..1940445 | - | 720 | WP_001038704.1 | hypothetical protein | VF |
| FF958_RS09605 () | 1940566..1941285 | - | 720 | WP_001038867.1 | hypothetical protein | VF |
| FF958_RS09610 () | 1941343..1942065 | - | 723 | WP_001039447.1 | hypothetical protein | VF |
| FF958_RS09615 () | 1942190..1942897 | - | 708 | WP_001039435.1 | hypothetical protein | VF |
| FF958_RS09625 () | 1943860..1944426 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| FF958_RS09630 () | 1944900..1945598 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| FF958_RS09635 () | 1945595..1946356 | - | 762 | WP_111724820.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| FF958_RS09640 () | 1946353..1947045 | - | 693 | WP_001096791.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| FF958_RS09645 () | 1947068..1948441 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| FF958_RS09650 () | 1948451..1948969 | - | 519 | WP_000504439.1 | flavoprotein | - |
| FF958_RS09655 () | 1948985..1950229 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| FF958_RS09660 () | 1950222..1951964 | - | 1743 | WP_001803290.1 | lantibiotic dehydratase | - |
| FF958_RS09665 () | 1952029..1952172 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| FF958_RS09675 () | 1952909..1953052 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| FF958_RS09680 () | 1953293..1954276 | - | 984 | WP_000782464.1 | hypothetical protein | VF |
| FF958_RS09685 () | 1954278..1955213 | - | 936 | WP_000473596.1 | hypothetical protein | VF |
| FF958_RS09690 () | 1956013..1956552 | + | 540 | WP_001790220.1 | hypothetical protein | - |
| FF958_RS09695 () | 1956565..1957353 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| FF958_RS09700 () | 1957814..1958022 | + | 209 | Protein_1858 | hypothetical protein | - |
| FF958_RS09750 () | 1959809..1960363 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| FF958_RS09760 () | 1960686..1962086 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| FF958_RS09765 () | 1962110..1963033 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| FF958_RS09770 () | 1963091..1964128 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| FF958_RS09775 () | 1964118..1964228 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| FF958_RS09780 () | 1964391..1964894 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA10024 | NC_009641 | 1882747..1922929 | 0.001 |