MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93869 bp
Accession: NZ_CP040565 Location: 1..93869 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7699 Replicon: plasmid pCFSAN059544
Accession: NZ_CP040565 Location: 1..93869 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7699 Replicon: plasmid pCFSAN059544
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGA24_RS23980 () | 1108..1542 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| FGA24_RS23985 () | 1609..2043 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| FGA24_RS23990 () | 2279..2602 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| FGA24_RS24000 () | 3303..3821 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| FGA24_RS24005 () | 3876..4118 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| FGA24_RS24010 () | 4187..6184 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| FGA24_RS24015 () | 6224..6658 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| FGA24_RS24020 () | 6655..7392 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| FGA24_RS24650 () | 7641..7799 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| FGA24_RS24655 () | 7902..8720 | + | 819 | Protein_10 | DUF945 domain-containing protein | - |
| FGA24_RS24035 () | 9031..9501 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| FGA24_RS24045 () | 9916..10296 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| FGA24_RS24050 () | 10489..11175 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| FGA24_RS24055 () | 11269..11496 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| FGA24_RS24060 () | 11538..11900 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| FGA24_RS24065 () | 11915..12226 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| FGA24_RS24070 () | 12248..12814 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| FGA24_RS24075 () | 12801..13541 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| FGA24_RS24080 () | 13541..14962 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| FGA24_RS24085 () | 14952..15548 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| FGA24_RS24090 () | 15526..15771 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| FGA24_RS24095 () | 15768..16283 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FGA24_RS24100 () | 16418..16639 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| FGA24_RS24105 () | 16632..17099 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| FGA24_RS24110 () | 17216..17479 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| FGA24_RS24115 () | 17495..20143 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| FGA24_RS24120 () | 20118..20504 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| FGA24_RS24125 () | 20501..21133 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| FGA24_RS24130 () | 21130..22122 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| FGA24_RS24135 () | 22141..22449 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| FGA24_RS24140 () | 22434..23072 | + | 639 | WP_058800887.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FGA24_RS24145 () | 23109..23528 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| FGA24_RS24150 () | 23525..25351 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FGA24_RS24155 () | 25362..25577 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| FGA24_RS24160 () | 25589..26338 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FGA24_RS24165 () | 26552..26845 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FGA24_RS24170 () | 26832..27380 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FGA24_RS24175 () | 27370..28752 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| FGA24_RS24180 () | 28749..31571 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FGA24_RS24185 () | 31587..32081 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| FGA24_RS24190 () | 32117..32848 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| FGA24_RS24195 () | 33225..35387 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| FGA24_RS24200 () | 35396..35794 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FGA24_RS24205 () | 35794..36021 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FGA24_RS24210 () | 36103..41361 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| FGA24_RS24215 () | 41381..42121 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| FGA24_RS24220 () | 42176..42739 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| FGA24_RS24225 () | 42854..43138 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| FGA24_RS24230 () | 43151..43306 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| FGA24_RS24235 () | 43472..43914 | + | 443 | Protein_50 | phospholipase | - |
| FGA24_RS24245 () | 44093..44359 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| FGA24_RS24250 () | 44609..44686 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| FGA24_RS24255 () | 44667..45548 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| FGA24_RS24265 () | 46408..46629 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| FGA24_RS24270 () | 46726..47484 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| FGA24_RS24275 () | 47751..48308 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| FGA24_RS24280 () | 48398..49297 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| FGA24_RS24660 () | 49294..49440 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| FGA24_RS24285 () | 49430..50083 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| FGA24_RS24290 () | 50328..50678 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| FGA24_RS24295 () | 50663..50875 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| FGA24_RS24300 () | 51307..52182 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| FGA24_RS24305 () | 52435..52992 | - | 558 | WP_010999940.1 | membrane protein | - |
| FGA24_RS24310 () | 53007..53699 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| FGA24_RS24315 () | 53692..56100 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| FGA24_RS24320 () | 56328..56846 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| FGA24_RS24325 () | 57121..57423 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| FGA24_RS24335 () | 58142..58523 | + | 382 | Protein_68 | YgiW/YdeI family stress tolerance OB fold protein | - |
| FGA24_RS24340 () | 58800..59136 | + | 337 | Protein_69 | site-specific integrase | - |
| FGA24_RS24345 () | 59395..60384 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| FGA24_RS24350 () | 60878..61174 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| FGA24_RS24360 () | 61658..62179 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| FGA24_RS24365 () | 62855..63073 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FGA24_RS24370 () | 63075..63380 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FGA24_RS24375 () | 63382..63672 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| FGA24_RS24380 () | 63669..64190 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| FGA24_RS24385 () | 64225..65007 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| FGA24_RS24390 () | 65016..65729 | + | 714 | Protein_78 | EAL domain-containing protein | - |
| FGA24_RS24400 () | 65733..66242 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| FGA24_RS24405 () | 66236..66721 | + | 486 | WP_000905606.1 | membrane protein | - |
| FGA24_RS24410 () | 66998..67285 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| FGA24_RS24415 () | 67441..68001 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| FGA24_RS24420 () | 68068..68418 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| FGA24_RS24425 () | 68475..68899 | + | 425 | Protein_84 | IS200/IS605 family transposase | - |
| FGA24_RS24430 () | 69026..69676 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| FGA24_RS24435 () | 69937..70662 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| FGA24_RS24440 () | 70943..72718 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| FGA24_RS24665 () | 72770..72937 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| FGA24_RS24445 () | 72900..73667 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| FGA24_RS24450 () | 73841..74005 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| FGA24_RS24455 () | 74179..75072 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| FGA24_RS24670 () | 75043..75155 | - | 113 | Protein_92 | transcriptional activator | - |
| FGA24_RS24460 () | 75681..76718 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| FGA24_RS24465 () | 76907..77932 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| FGA24_RS24470 () | 77865..79529 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| FGA24_RS24475 () | 79513..80073 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| FGA24_RS24480 () | 80280..81020 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| FGA24_RS24490 () | 81675..82163 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| FGA24_RS24495 () | 82422..83537 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| FGA24_RS24500 () | 83623..84039 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| FGA24_RS24505 () | 84223..84558 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| FGA24_RS24510 () | 84615..85181 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| FGA24_RS24515 () | 85213..86154 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| FGA24_RS24520 () | 86569..87774 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| FGA24_RS24525 () | 87774..88748 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| FGA24_RS24530 () | 88830..90104 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| FGA24_RS24535 () | 90104..90526 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FGA24_RS24540 () | 91037..91507 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| FGA24_RS24545 () | 91500..91856 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| FGA24_RS24555 () | 92238..92918 | + | 681 | WP_000088645.1 | DNA methylase | - |
| FGA24_RS24560 () | 92918..93139 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| FGA24_RS24565 () | 93195..93608 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|