MGE detailed information
MGE type: Genomic_island MGE length: 30963 bp
Accession: NZ_CP040269 Location: 2355467..2386429 Organism: Escherichia coli strain 1500 Replicon: chromosome
Accession: NZ_CP040269 Location: 2355467..2386429 Organism: Escherichia coli strain 1500 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EST53_RS11370 () | 2350786..2351688 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| EST53_RS11375 () | 2351708..2352211 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| EST53_RS11380 () | 2352224..2352754 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| EST53_RS11385 () | 2352764..2355400 | - | 2637 | WP_097422729.1 | fimbrial usher FimD | - |
| EST53_RS11390 () | 2355467..2356192 | - | 726 | WP_000066573.1 | Chaperone protein FimC | VF |
| EST53_RS11395 () | 2356229..2356768 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| EST53_RS11400 () | 2356833..2357381 | - | 549 | WP_000695543.1 | Fimbrial subunit type 1 | VF |
| EST53_RS11405 () | 2357861..2358457 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| EST53_RS11410 () | 2358929..2359537 | - | 609 | WP_086629326.1 | Tyrosine recombinase XerC | VF |
| EST53_RS11415 () | 2360993..2361709 | + | 717 | WP_021534608.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| EST53_RS11420 () | 2361729..2362835 | + | 1107 | WP_032217392.1 | N-acetylneuraminate epimerase | - |
| EST53_RS11425 () | 2362900..2363880 | + | 981 | WP_053264536.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| EST53_RS11430 () | 2363888..2364538 | - | 651 | WP_001037963.1 | HNH endonuclease | - |
| EST53_RS23720 () | 2364917..2365102 | + | 186 | WP_000066585.1 | hypothetical protein | - |
| EST53_RS11445 () | 2365140..2366087 | - | 948 | WP_000342497.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| EST53_RS11450 () | 2366080..2366475 | - | 396 | WP_000152741.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| EST53_RS11455 () | 2366545..2367378 | - | 834 | WP_053264535.1 | DUF4942 domain-containing protein | - |
| EST53_RS11460 () | 2367493..2367834 | - | 342 | WP_053264534.1 | TA system toxin CbtA family protein | Toxin Detail |
| EST53_RS11465 () | 2367865..2368200 | - | 336 | WP_053264533.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EST53_RS11470 () | 2368200..2368673 | - | 474 | WP_001296921.1 | DNA repair protein RadC | - |
| EST53_RS11475 () | 2368703..2369521 | - | 819 | WP_053264532.1 | DUF945 domain-containing protein | - |
| EST53_RS11480 () | 2369757..2370710 | - | 954 | WP_053264531.1 | hypothetical protein | - |
| EST53_RS11485 () | 2371303..2371917 | + | 615 | WP_000772910.1 | inovirus Gp2 family protein | - |
| EST53_RS11490 () | 2372035..2372253 | + | 219 | WP_001064742.1 | AlpA family phage regulatory protein | - |
| EST53_RS11495 () | 2372468..2373253 | - | 786 | WP_053264530.1 | hypothetical protein | - |
| EST53_RS11500 () | 2373265..2374278 | - | 1014 | WP_000342611.1 | 50S ribosome-binding GTPase | - |
| EST53_RS11505 () | 2374317..2375000 | - | 684 | WP_064759377.1 | WYL domain-containing protein | - |
| EST53_RS11510 () | 2375576..2378989 | + | 3414 | WP_053264528.1 | DEAD/DEAH box helicase family protein | - |
| EST53_RS11515 () | 2379053..2380687 | + | 1635 | WP_053264527.1 | type I restriction-modification system subunit M | - |
| EST53_RS11520 () | 2380684..2381850 | + | 1167 | WP_053264526.1 | restriction endonuclease subunit S | - |
| EST53_RS11525 () | 2381911..2382597 | + | 687 | WP_053264525.1 | hypothetical protein | - |
| EST53_RS11530 () | 2382638..2386429 | - | 3792 | WP_053264524.1 | SIR2 family protein | - |
| EST53_RS11535 () | 2386579..2387544 | + | 966 | WP_053264523.1 | 5'-nucleotidase | - |
| EST53_RS11540 () | 2387622..2388497 | - | 876 | WP_044066756.1 | HNH endonuclease | - |
| EST53_RS11545 () | 2388702..2389973 | - | 1272 | WP_053264522.1 | integrase arm-type DNA-binding domain-containing protein | - |
| EST53_RS11555 () | 2390493..2390702 | + | 210 | WP_001514390.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|