MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82718 bp
Accession: NZ_CP040070 Location: 1..82718 Organism: Escherichia coli strain A1_181 Replicon: plasmid p_unnamed3
Accession: NZ_CP040070 Location: 1..82718 Organism: Escherichia coli strain A1_181 Replicon: plasmid p_unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDP43_RS25225 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| FDP43_RS25230 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| FDP43_RS25235 () | 2124..2306 | - | 183 | WP_042344623.1 | hypothetical protein | - |
| FDP43_RS25245 () | 2649..2956 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| FDP43_RS25255 () | 3449..4618 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| FDP43_RS25260 () | 4651..4779 | + | 129 | Protein_5 | IS481 family transposase | - |
| FDP43_RS25265 () | 4814..5107 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| FDP43_RS25270 () | 5204..5901 | + | 698 | Protein_7 | IS1 family transposase IS1X2 | Transposase |
| FDP43_RS25275 () | 5916..7079 | + | 1164 | Protein_8 | IS4 family transposase IS10R | Transposase |
| FDP43_RS26185 () | 7095..7208 | - | 114 | Protein_9 | AraC family transcriptional regulator | - |
| FDP43_RS25285 () | 7259..7963 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDP43_RS25295 () | 8286..9818 | - | 1533 | WP_013362816.1 | IS91 family transposase ISVsa3 | Transposase |
| FDP43_RS26190 () | 10045..10386 | - | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| FDP43_RS25305 () | 10347..10796 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| FDP43_RS25310 () | 11305..12425 | + | 1121 | WP_139972939.1 | IS3 family transposase ISSen4 | Transposase |
| FDP43_RS26195 () | 12513..12683 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| FDP43_RS25320 () | 12628..13365 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| FDP43_RS25325 () | 13491..13586 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| FDP43_RS25330 () | 13721..14425 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDP43_RS25340 () | 14547..15452 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| FDP43_RS25345 () | 15449..16687 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| FDP43_RS25350 () | 16687..17271 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| FDP43_RS25365 () | 17764..18528 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| FDP43_RS26200 () | 18646..18711 | - | 66 | Protein_23 | EAL domain-containing protein | - |
| FDP43_RS25375 () | 18755..19060 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| FDP43_RS25380 () | 19071..20276 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| FDP43_RS25385 () | 20432..20635 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| FDP43_RS25395 () | 20763..21602 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| FDP43_RS25400 () | 21596..21943 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| FDP43_RS25405 () | 22149..22937 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| FDP43_RS25410 () | 23068..23541 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| FDP43_RS25415 () | 23699..24379 | + | 681 | Protein_31 | IS91 family transposase ISAzo26 | Transposase |
| FDP43_RS25420 () | 24444..25148 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDP43_RS25425 () | 25214..25759 | + | 546 | Protein_33 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FDP43_RS25430 () | 25795..26210 | - | 416 | Protein_34 | IS1 family transposase IS1R | Transposase |
| FDP43_RS25435 () | 26459..26860 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FDP43_RS25440 () | 26793..27050 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FDP43_RS25445 () | 27143..27796 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| FDP43_RS25455 () | 28736..29593 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| FDP43_RS25460 () | 29586..29660 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| FDP43_RS26385 () | 29657..29791 | - | 135 | Protein_40 | protein CopA/IncA | - |
| FDP43_RS25465 () | 29897..30151 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| FDP43_RS25470 () | 30448..30582 | - | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 30627..30687 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 30627..30687 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 30627..30687 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 30627..30687 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| FDP43_RS25475 () | 30654..30940 | - | 287 | Protein_43 | DUF2726 domain-containing protein | - |
| FDP43_RS25485 () | 31453..31665 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| FDP43_RS25490 () | 31796..32356 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| FDP43_RS25495 () | 32411..33157 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| FDP43_RS25500 () | 33177..37907 | - | 4731 | Protein_47 | Multifunctional conjugation protein TraI | Relaxase |
| FDP43_RS25505 () | 37901..38179 | - | 279 | Protein_48 | DUF1380 family protein | - |
| FDP43_RS25510 () | 38226..38528 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| FDP43_RS25520 () | 39068..39844 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| FDP43_RS25525 () | 39895..40329 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| FDP43_RS25530 () | 40343..40564 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| FDP43_RS25535 () | 40565..41248 | - | 684 | WP_000086185.1 | DNA methylase | - |
| FDP43_RS25540 () | 41325..41629 | - | 305 | Protein_54 | hypothetical protein | - |
| FDP43_RS25545 () | 41633..42535 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| FDP43_RS25560 () | 43402..44373 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FDP43_RS25565 () | 44373..45539 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| FDP43_RS25570 () | 46127..46396 | - | 270 | WP_001241949.1 | RepB family plasmid replication initiator protein | - |
| FDP43_RS25575 () | 46453..47666 | + | 1214 | WP_180707482.1 | IS3 family transposase IS629 | Transposase |
| FDP43_RS25580 () | 47707..48195 | - | 489 | Protein_60 | RepB family plasmid replication initiator protein | - |
| FDP43_RS25585 () | 48969..49775 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| FDP43_RS25590 () | 49776..50081 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FDP43_RS25595 () | 50083..50301 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| FDP43_RS25600 () | 50935..51132 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| FDP43_RS25605 () | 51129..51413 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| FDP43_RS25610 () | 51433..52529 | - | 1097 | Protein_66 | hypothetical protein | - |
| FDP43_RS25620 () | 53863..55476 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| FDP43_RS25625 () | 55507..55857 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| FDP43_RS25630 () | 55854..56279 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| FDP43_RS25635 () | 56606..59725 | - | 3120 | WP_001553851.1 | hypothetical protein | - |
| FDP43_RS25645 () | 60032..60262 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| FDP43_RS25650 () | 60259..60675 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FDP43_RS25655 () | 60837..62975 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| FDP43_RS25660 () | 63440..64435 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| FDP43_RS25665 () | 64439..65371 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| FDP43_RS25670 () | 65508..66205 | - | 698 | Protein_77 | IS1 family transposase IS1G | Transposase |
| FDP43_RS25675 () | 66419..69535 | - | 3117 | WP_001553854.1 | HsdR family type I site-specific deoxyribonuclease | - |
| FDP43_RS25680 () | 69657..70940 | - | 1284 | WP_001553855.1 | restriction endonuclease subunit S | - |
| FDP43_RS25685 () | 70937..72493 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| FDP43_RS25690 () | 72676..72897 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| FDP43_RS25700 () | 73102..74330 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| FDP43_RS25705 () | 74344..74613 | + | 270 | Protein_83 | type II toxin-antitoxin system death-on-curing family toxin | - |
| FDP43_RS25710 () | 74618..74797 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| FDP43_RS25715 () | 74825..75184 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| FDP43_RS25720 () | 75108..75521 | + | 414 | Protein_86 | IS3 family transposase ISLad1 | Transposase |
| FDP43_RS25725 () | 75471..75788 | - | 318 | WP_001513659.1 | hypothetical protein | - |
| FDP43_RS25730 () | 76016..76996 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| FDP43_RS25735 () | 77240..78643 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| FDP43_RS25740 () | 78630..79562 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| FDP43_RS25745 () | 79671..80000 | - | 330 | Protein_91 | TOBE domain-containing protein | - |
| FDP43_RS25750 () | 80016..80713 | - | 698 | Protein_92 | IS1 family transposase IS1R | Transposase |
| FDP43_RS25755 () | 81120..81932 | - | 813 | WP_016236297.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|