MGE detailed information
MGE type: Mobilizable plasmid MGE length: 62787 bp
Accession: NZ_CP039842 Location: 1..62787 Organism: Escherichia coli O157:H7 strain USDA5905 Replicon: plasmid pUSDA5905_2
Accession: NZ_CP039842 Location: 1..62787 Organism: Escherichia coli O157:H7 strain USDA5905 Replicon: plasmid pUSDA5905_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3175_RS26645 () | 645..1028 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| E3175_RS26650 () | 1215..1904 | + | 690 | Protein_2 | conjugal transfer transcriptional regulator TraJ | - |
| E3175_RS26655 () | 2003..2398 | + | 396 | WP_013009335.1 | conjugal transfer relaxosome protein TraY | - |
| E3175_RS26660 () | 2431..2795 | + | 365 | Protein_4 | type IV conjugative transfer system pilin TraA | - |
| E3175_RS26665 () | 2810..3121 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| E3175_RS26670 () | 3143..3709 | + | 567 | WP_000399770.1 | type IV conjugative transfer system protein TraE | - |
| E3175_RS26675 () | 3696..4196 | + | 501 | Protein_7 | type-F conjugative transfer system secretin TraK | - |
| E3175_RS26680 () | 4227..4973 | + | 747 | Protein_8 | conjugative transfer relaxase/helicase TraI | - |
| E3175_RS26685 () | 4973..5434 | + | 462 | WP_077626248.1 | conjugal transfer protein TraI | - |
| E3175_RS26690 () | 5454..6200 | + | 747 | WP_000205758.1 | conjugal transfer pilus acetylase TraX | - |
| E3175_RS26695 () | 6255..6815 | + | 561 | WP_000139371.1 | fertility inhibition protein FinO | - |
| E3175_RS26700 () | 6950..7155 | + | 206 | Protein_12 | hypothetical protein | - |
| E3175_RS26705 () | 7401..7795 | + | 395 | Protein_13 | thermonuclease family protein | - |
| E3175_RS26710 () | 8158..8301 | - | 144 | Protein_14 | IS3 family transposase | - |
| E3175_RS26715 () | 8304..8447 | - | 144 | Protein_15 | IS3 family transposase | - |
| E3175_RS26720 () | 8524..9197 | + | 674 | Protein_16 | DDE-type integrase/transposase/recombinase | - |
| E3175_RS26725 () | 9670..12330 | + | 2661 | WP_000770128.1 | peptidase M66 | - |
| E3175_RS26730 () | 12414..13289 | + | 876 | WP_001368871.1 | type II secretion system protein GspC | - |
| E3175_RS26735 () | 13290..15260 | + | 1971 | WP_013009342.1 | variant type II secretion system secretin EtpD | - |
| E3175_RS26740 () | 15257..16759 | + | 1503 | WP_001418198.1 | type II secretion system ATPase GspE | - |
| E3175_RS26745 () | 16761..17984 | + | 1224 | WP_001173149.1 | type II secretion system inner membrane protein GspF | - |
| E3175_RS26750 () | 18015..18449 | + | 435 | WP_001231213.1 | type II secretion system major pseudopilin GspG | - |
| E3175_RS26755 () | 18446..18997 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| E3175_RS26760 () | 19012..19359 | + | 348 | WP_001420206.1 | type II secretion system minor pseudopilin GspI | - |
| E3175_RS26765 () | 19356..19955 | + | 600 | WP_000082784.1 | type II secretion system minor pseudopilin GspJ | - |
| E3175_RS26770 () | 19952..20929 | + | 978 | WP_000842183.1 | type II secretion system minor pseudopilin GspK | - |
| E3175_RS26775 () | 20968..22140 | + | 1173 | WP_071526091.1 | type II secretion system protein GspL | - |
| E3175_RS26780 () | 22127..22642 | + | 516 | WP_000998852.1 | type II secretion system protein M | - |
| E3175_RS26785 () | 22694..23527 | + | 834 | WP_000088803.1 | A24 family peptidase | - |
| E3175_RS26790 () | 23621..24022 | + | 402 | WP_001222321.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3175_RS26795 () | 24097..24312 | + | 216 | Protein_31 | IS3 family transposase | - |
| E3175_RS26800 () | 24611..24904 | + | 294 | Protein_32 | hypothetical protein | - |
| E3175_RS26805 () | 25133..25381 | + | 249 | WP_000083841.1 | replication regulatory protein RepA | - |
| E3175_RS26810 () | 25404..25511 | + | 108 | Protein_34 | incFII family plasmid replication initiator RepA | - |
| E3175_RS26815 () | 26213..26371 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| E3175_RS26820 () | 26426..26695 | + | 270 | WP_000079946.1 | hypothetical protein | Antitoxin Detail |
| E3175_RS26825 () | 26692..26973 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3175_RS26830 () | 27169..27510 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| E3175_RS26835 () | 27810..28397 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| E3175_RS26840 () | 28679..29272 | - | 594 | WP_000517696.1 | hypothetical protein | - |
| E3175_RS26845 () | 29625..30971 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| E3175_RS26850 () | 31470..32111 | - | 642 | WP_000470626.1 | recombinase family protein | - |
| E3175_RS26855 () | 32266..35244 | + | 2979 | WP_000124031.1 | Tn3-like element TnEc1 family transposase | - |
| E3175_RS26860 () | 35322..35726 | + | 405 | WP_000839179.1 | IS66 family insertion sequence hypothetical protein | - |
| E3175_RS26865 () | 35723..36070 | + | 348 | WP_000612624.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| E3175_RS26870 () | 36119..37657 | + | 1539 | WP_000099186.1 | IS66-like element ISEc22 family transposase | - |
| E3175_RS26875 () | 37739..38179 | + | 441 | WP_072141484.1 | recombinase family protein | - |
| E3175_RS26880 () | 38160..38867 | + | 708 | Protein_48 | DUF4158 domain-containing protein | - |
| E3175_RS26885 () | 38953..39696 | + | 744 | Protein_49 | IS21 family transposase | - |
| E3175_RS26890 () | 39833..40497 | + | 665 | Protein_50 | tyrosine-type recombinase/integrase | - |
| E3175_RS26895 () | 41180..42505 | + | 1326 | WP_001025657.1 | type III secretion system effector NleA | - |
| E3175_RS26900 () | 42654..42937 | + | 284 | Protein_52 | YkgJ family cysteine cluster protein | - |
| E3175_RS26910 () | 44808..45245 | - | 438 | WP_000273581.1 | hypothetical protein | - |
| E3175_RS26915 () | 45494..45673 | - | 180 | WP_000526857.1 | hypothetical protein | - |
| E3175_RS26920 () | 45876..46250 | + | 375 | WP_001368887.1 | hypothetical protein | - |
| E3175_RS26925 () | 46561..46722 | - | 162 | Protein_57 | epoxyqueuosine reductase QueH | - |
| E3175_RS26930 () | 46773..46913 | + | 141 | Protein_58 | serine/threonine protein kinase | - |
| E3175_RS26935 () | 47037..47777 | + | 741 | WP_001066926.1 | tyrosine-type recombinase/integrase | - |
| E3175_RS26940 () | 48061..49038 | - | 978 | WP_000361616.1 | RepB family plasmid replication initiator protein | - |
| E3175_RS26945 () | 49446..49595 | - | 150 | WP_001483821.1 | hypothetical protein | - |
| E3175_RS26950 () | 49684..50089 | - | 406 | Protein_62 | DDE-type integrase/transposase/recombinase | - |
| E3175_RS26955 () | 50091..50378 | - | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3175_RS26960 () | 50375..50626 | - | 252 | WP_001132894.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| E3175_RS26965 () | 51015..52220 | + | 1206 | WP_000817637.1 | AAA family ATPase | - |
| E3175_RS26970 () | 52217..53179 | + | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| E3175_RS26975 () | 53320..54331 | - | 1012 | Protein_67 | DUF4113 domain-containing protein | - |
| E3175_RS26980 () | 54362..54778 | + | 417 | Protein_68 | DUF1281 domain-containing protein | - |
| E3175_RS26985 () | 54782..55087 | + | 306 | WP_032163448.1 | hypothetical protein | - |
| E3175_RS26990 () | 55164..55847 | + | 684 | WP_000085942.1 | DNA methylase | - |
| E3175_RS26995 () | 55848..56069 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| E3175_RS27000 () | 56081..56515 | + | 435 | WP_000274489.1 | DUF1380 family protein | - |
| E3175_RS27005 () | 56561..56786 | + | 226 | Protein_73 | hypothetical protein | - |
| E3175_RS27010 () | 57210..57781 | + | 572 | Protein_74 | YubH family protein | - |
| E3175_RS27015 () | 57877..58155 | + | 279 | WP_072131700.1 | antirestriction protein | - |
| E3175_RS27020 () | 58202..58624 | + | 423 | WP_000271758.1 | DUF1380 family protein | - |
| E3175_RS27025 () | 58621..58812 | + | 192 | WP_001024835.1 | hypothetical protein | - |
| E3175_RS27030 () | 58895..59263 | + | 369 | WP_049806405.1 | hypothetical protein | - |
| E3175_RS27035 () | 59311..59517 | + | 207 | WP_000275846.1 | hypothetical protein | - |
| E3175_RS27040 () | 59631..59828 | + | 198 | WP_045174704.1 | hypothetical protein | - |
| E3175_RS27045 () | 59947..60768 | + | 822 | WP_001234472.1 | DUF945 domain-containing protein | - |
| E3175_RS27050 () | 61047..62387 | + | 1341 | WP_001130324.1 | IS4 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|