NZ_CP0396991..210225

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 210225 bp
Accession: NZ_CP039699        Location: 1..210225         Organism: Novosphingobium sp. ABRDHK2       Replicon: plasmid pABRDHK234


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FA702_RS21575 () 270..817 - 548 Protein_0 IS21-like element helper ATPase IstB -
FA702_RS23020 () 814..975 - 162 WP_210417681.1 hypothetical protein -
FA702_RS21585 () 1617..2436 - 820 Protein_2 IS21-like element helper ATPase IstB -
FA702_RS21590 () 2433..3934 - 1502 Protein_3 IS21 family transposase ISBj11 Transposase
FA702_RS23025 () 4145..4603 + 459 WP_210417679.1 hypothetical protein -
FA702_RS21600 () 4675..4956 - 282 WP_004212690.1 type II toxin-antitoxin system YafQ family toxin Toxin Detail
FA702_RS21605 () 4943..5206 - 264 WP_004212689.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
FA702_RS21610 () 5590..6027 - 438 WP_007683347.1 metal-binding protein -
FA702_RS21615 () 6107..7347 - 1241 Protein_8 MFS transporter -
FA702_RS21620 () 7341..8327 - 987 WP_009823975.1 copper resistance protein B -
FA702_RS21625 () 8324..10030 - 1707 WP_136958154.1 copper resistance system multicopper oxidase -
FA702_RS21630 () 10056..11081 - 1026 WP_044663293.1 alcohol dehydrogenase AdhP -
FA702_RS21635 () 11108..12628 - 1521 WP_015449264.1 aldehyde dehydrogenase -
FA702_RS21640 () 12881..13210 - 330 WP_004212674.1 hypothetical protein -
FA702_RS23030 () 13359..13760 - 402 WP_015449265.1 hypothetical protein -
FA702_RS21650 () 14079..14369 - 291 WP_007406388.1 hypothetical protein -
FA702_RS21655 () 14598..15821 - 1224 WP_016743863.1 glycoside hydrolase family 130 protein -
FA702_RS21660 () 16154..16594 - 441 WP_015449267.1 four-helix bundle copper-binding protein -
FA702_RS21665 () 16609..17052 - 444 WP_007406411.1 DUF1622 domain-containing protein -
FA702_RS21670 () 17039..17761 - 723 WP_004212662.1 hypothetical protein -
FA702_RS21675 () 17758..18486 - 729 WP_136958155.1 hypothetical protein -
FA702_RS21680 () 18486..20402 - 1917 WP_136958156.1 2Fe-2S iron-sulfur cluster binding domain-containing protein -
FA702_RS21685 () 20426..20746 - 321 WP_007406382.1 hypothetical protein -
FA702_RS21690 () 20805..21026 - 222 WP_062345065.1 hypothetical protein -
FA702_RS21695 () 21023..21502 - 480 WP_062345064.1 heavy metal-responsive transcriptional regulator -
FA702_RS21700 () 21645..22001 - 357 WP_210417682.1 hypothetical protein -
FA702_RS21705 () 22245..22607 + 363 WP_007406428.1 hypothetical protein -
FA702_RS21710 () 22684..22941 + 258 WP_136958229.1 hypothetical protein -
FA702_RS21715 () 23005..24267 + 1263 WP_136958157.1 TolC family protein -
FA702_RS21720 () 24264..25754 + 1491 WP_021243085.1 Cation efflux system protein CusB VF
FA702_RS21725 () 25751..28894 + 3144 WP_136958158.1 efflux RND transporter permease subunit -
FA702_RS21730 () 28891..29295 + 405 WP_037462736.1 copper-binding protein -
FA702_RS21735 () 29544..30839 + 1296 WP_021247421.1 hypothetical protein -
FA702_RS21740 () 30906..31436 - 531 WP_007686150.1 GNAT family N-acetyltransferase -
FA702_RS21745 () 31433..32053 - 621 WP_008832583.1 Tn3 family transposase TnpR_ISMex22 Transposase
FA702_RS21750 () 32179..34451 + 2273 Protein_35 Tn3 family transposase TnpA_ISRsp12 Transposase
FA702_RS21755 () 34513..35073 - 561 WP_004213255.1 Tn3 family transposase TnpR_TnAs3 Transposase
FA702_RS21760 () 35244..35666 - 423 WP_014072603.1 helix-turn-helix domain-containing protein -
FA702_RS21765 () 35743..36138 + 396 WP_014072602.1 mercury transporter MerT -
FA702_RS21770 () 36151..36480 + 330 WP_004213249.1 heavy-metal-associated domain-containing protein -
FA702_RS21775 () 36518..37936 + 1419 WP_046765853.1 mercury(II) reductase -
FA702_RS21780 () 38028..40997 + 2970 WP_014072601.1 Tn3 family transposase TnpA_ISAli20 Transposase
FA702_RS21785 () 41055..41630 + 576 Protein_42 Tn3 family transposase TnpA_ISRsp12 Transposase
FA702_RS21790 () 41878..42627 - 750 WP_004212890.1 HAD-IIB family hydrolase -
FA702_RS21795 () 42624..45125 - 2502 WP_004212886.1 heavy metal translocating P-type ATPase -
FA702_RS21800 () 45122..45730 - 609 WP_004212885.1 cation diffusion facilitator family transporter -
FA702_RS21805 () 45727..46413 - 687 WP_004212882.1 hypothetical protein -
FA702_RS21810 () 46417..46830 - 414 WP_017183574.1 hypothetical protein -
FA702_RS21815 () 46878..47255 - 378 WP_021238674.1 hypothetical protein -
FA702_RS21820 () 47252..47740 - 489 WP_004212879.1 SRPBCC domain-containing protein -
FA702_RS21825 () 47794..51039 - 3246 WP_004212878.1 CusA/CzcA family heavy metal efflux RND transporter -
FA702_RS21830 () 51043..52221 - 1179 WP_004212877.1 efflux RND transporter periplasmic adaptor subunit -
FA702_RS21835 () 52221..53498 - 1278 WP_004212875.1 TolC family protein -
FA702_RS21840 () 53559..53855 - 297 WP_007406840.1 hypothetical protein -
FA702_RS21845 () 53929..55896 - 1968 WP_004212871.1 FTR1 family protein -
FA702_RS21850 () 55896..56522 - 627 WP_004212870.1 cation diffusion facilitator family transporter -
FA702_RS21855 () 56598..57017 + 420 WP_136958159.1 helix-turn-helix domain-containing protein -
FA702_RS21860 () 57011..58213 - 1203 WP_013039112.1 aspartyl protease family protein -
FA702_RS21865 () 58503..59075 - 573 WP_021224432.1 Tn3 family transposase TnpR_ISThsp9 Transposase
FA702_RS21870 () 59267..60666 + 1400 Protein_59 IS481 family transposase ISGur11 Transposase
FA702_RS21875 () 60593..61471 + 879 WP_009824028.1 AAA family ATPase -
FA702_RS21880 () 61786..62979 - 1194 WP_136958160.1 tyrosine-type recombinase/integrase -
FA702_RS21885 () 63174..64322 + 1149 WP_136958161.1 hypothetical protein -
FA702_RS21890 () 64354..65397 - 1044 WP_168196196.1 tyrosine-type recombinase/integrase -
FA702_RS21895 () 65730..66698 + 969 WP_136958163.1 hypothetical protein -
FA702_RS21900 () 66695..67417 - 723 Protein_65 transposase -
FA702_RS21905 () 67633..68448 - 816 WP_136958164.1 TniB family NTP-binding protein -
FA702_RS21910 () 68445..70115 - 1671 WP_136958165.1 Mu transposase C-terminal domain-containing protein -
FA702_RS21915 () 70238..71218 + 981 WP_136958166.1 hypothetical protein -
FA702_RS21920 () 72237..73514 - 1278 WP_210417685.1 replication initiator protein A -
FA702_RS21925 () 73687..74706 - 1020 WP_136958168.1 ParB/RepB/Spo0J family partition protein -
FA702_RS21930 () 74703..75902 - 1200 WP_168196193.1 Cell division protein PomZ VF
FA702_RS21935 () 76218..76457 + 240 WP_136958169.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
FA702_RS21940 () 76473..76901 + 429 WP_136958170.1 type II toxin-antitoxin system VapC family toxin -
FA702_RS21945 () 77121..78209 + 1089 WP_136957250.1 IS5 family transposase ISSsp126 Transposase
FA702_RS21950 () 78847..80127 - 1281 WP_136958171.1 HD-GYP domain-containing protein -
FA702_RS21955 () 80331..80867 + 537 WP_136958172.1 hypothetical protein -
FA702_RS21960 () 80968..82056 - 1089 WP_136957250.1 IS5 family transposase ISSsp126 Transposase
FA702_RS21965 () 82210..85875 + 3666 WP_136958173.1 strawberry notch family protein -
FA702_RS21970 () 85872..86285 + 414 WP_136958174.1 hypothetical protein -
FA702_RS21975 () 86359..86637 + 279 WP_136958231.1 type II toxin-antitoxin system RelE/ParE family toxin -
FA702_RS21980 () 86648..86968 + 321 WP_136958175.1 HigA family addiction module antidote protein -
FA702_RS21985 () 86931..87164 + 234 WP_136958176.1 hypothetical protein -
FA702_RS21990 () 87313..89391 + 2079 WP_136958177.1 ParB N-terminal domain-containing protein -
FA702_RS21995 () 89472..90527 + 1056 WP_136958178.1 hypothetical protein -
FA702_RS22000 () 91061..91381 - 321 WP_136958232.1 STAS-like domain-containing protein -
FA702_RS22005 () 91386..92519 - 1134 WP_136958179.1 hypothetical protein -
FA702_RS22010 () 92647..93582 - 936 WP_136958180.1 IS110 family transposase ISHne3 Transposase
FA702_RS22015 () 93824..94801 + 978 WP_136958181.1 DUF1738 domain-containing protein -
FA702_RS22020 () 94814..95104 + 291 WP_136958182.1 hypothetical protein -
FA702_RS22025 () 95252..95617 + 366 WP_136958183.1 hypothetical protein -
FA702_RS22030 () 95760..96137 + 378 WP_136958184.1 hypothetical protein -
FA702_RS22035 () 96134..96391 + 258 WP_136958185.1 hypothetical protein -
FA702_RS22040 () 96477..96827 + 351 WP_136958186.1 hypothetical protein -
FA702_RS22045 () 96851..97222 + 372 WP_136958187.1 DUF3768 domain-containing protein -
FA702_RS23035 () 97222..97830 + 609 WP_210417683.1 hypothetical protein -
FA702_RS23040 () 97827..98633 + 807 WP_210417684.1 hypothetical protein -
FA702_RS22055 () 98630..98842 + 213 WP_136958188.1 hypothetical protein -
FA702_RS22060 () 99263..103666 + 4404 WP_136958189.1 hypothetical protein -
FA702_RS22065 () 103998..104777 - 780 WP_006955904.1 IS21 family transposase ISRsp3 Transposase
FA702_RS22070 () 104767..106287 - 1521 WP_032490240.1 IS21 family transposase ISRsp3 Transposase
FA702_RS22945 () 106385..106558 + 174 WP_168196194.1 hypothetical protein -
FA702_RS22075 () 106549..107049 + 501 WP_136958190.1 hypothetical protein -
FA702_RS22080 () 107049..107495 + 447 WP_136958191.1 hypothetical protein -
FA702_RS22085 () 108110..109165 - 1056 WP_136958233.1 DMT family transporter -
FA702_RS22090 () 109372..110676 + 1305 WP_136958192.1 chromate efflux transporter -
FA702_RS22095 () 110704..111423 + 720 WP_136958193.1 Superoxide dismutase [Fe] VF
FA702_RS22100 () 112277..113455 - 1179 WP_136958194.1 His-Xaa-Ser system radical SAM maturase HxsC -
FA702_RS22105 () 113452..114918 - 1467 WP_136958195.1 His-Xaa-Ser system radical SAM maturase HxsB -
FA702_RS22110 () 114911..115129 - 219 WP_136958196.1 hypothetical protein -
FA702_RS23045 () 115240..115515 - 276 WP_210417678.1 hypothetical protein -
FA702_RS22120 () 115778..116014 + 237 WP_136958197.1 hypothetical protein -
FA702_RS22125 () 116472..116735 - 264 WP_136958198.1 GlsB/YeaQ/YmgE family stress response membrane protein -
FA702_RS22130 () 117050..117916 + 867 WP_136958199.1 hypothetical protein -
FA702_RS22135 () 118054..118326 - 273 WP_136958200.1 DUF3761 domain-containing protein -
FA702_RS22140 () 118408..118629 - 222 WP_136958201.1 hypothetical protein -
FA702_RS22145 () 119297..119920 - 624 WP_136958202.1 plasmid pRiA4b ORF-3 family protein -
FA702_RS22150 () 119998..121239 - 1242 WP_136958203.1 DUF1173 domain-containing protein -
FA702_RS22155 () 121236..121730 - 495 WP_136958204.1 hypothetical protein -
FA702_RS22160 () 121931..122578 - 648 WP_168196195.1 HNH endonuclease -
FA702_RS22165 () 123429..123977 + 549 WP_136958206.1 DUF736 domain-containing protein -
FA702_RS22170 () 124091..125071 + 981 WP_136958207.1 DUF2493 domain-containing protein -
FA702_RS22175 () 125597..125788 + 192 WP_136958208.1 hypothetical protein -
FA702_RS22180 () 125982..127362 - 1381 Protein_123 IS1182 family transposase ISShsp2 Transposase
FA702_RS22185 () 127666..127899 + 234 WP_136958209.1 hypothetical protein -
FA702_RS22190 () 128359..128712 + 354 WP_136958210.1 single-stranded DNA-binding protein -
FA702_RS22195 () 128941..129930 + 990 WP_136958211.1 hypothetical protein -
FA702_RS22200 () 130333..130608 + 276 WP_136958234.1 WGR domain-containing protein -
FA702_RS22205 () 131068..131595 + 528 WP_136958212.1 hypothetical protein -
FA702_RS22210 () 131703..132371 + 669 Protein_129 IS21 family transposase ISRsp3 Transposase
FA702_RS22215 () 132443..133312 - 870 WP_136958213.1 IS21 family transposase ISRel5 Transposase
FA702_RS22220 () 133309..134814 - 1506 WP_136958214.1 IS21 family transposase ISBj11 Transposase
FA702_RS22225 () 134997..135857 + 861 Protein_132 IS21 family transposase ISRsp3 Transposase
FA702_RS22230 () 135851..136642 + 792 WP_136958215.1 IS21 family transposase ISRsp3 Transposase
FA702_RS22235 () 136732..136878 - 147 Protein_134 glutamine amidotransferase -
FA702_RS22240 () 136965..137600 - 636 WP_100215186.1 XRE family transcriptional regulator -
FA702_RS22245 () 137673..138560 - 888 WP_017181648.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD -
FA702_RS22250 () 138565..139422 - 858 WP_017181647.1 formyltetrahydrofolate deformylase -
FA702_RS22255 () 139435..139944 - 510 WP_017181646.1 hypothetical protein -
FA702_RS22260 () 139937..142888 - 2952 WP_136958216.1 sarcosine oxidase subunit alpha family protein -
FA702_RS22265 () 142885..143136 - 252 WP_017181644.1 sarcosine oxidase subunit delta -
FA702_RS22270 () 143149..144405 - 1257 WP_017181643.1 sarcosine oxidase subunit beta family protein -
FA702_RS22275 () 144492..145475 + 984 WP_017181642.1 HTH-type transcriptional regulator CdhR VF
FA702_RS22280 () 145841..146842 - 1002 WP_136958235.1 tyrosine-type recombinase/integrase -
FA702_RS22285 () 146935..149913 - 2979 WP_136958217.1 Tn3 family transposase TnpA_ISMpo10 Transposase
FA702_RS22290 () 149918..150502 - 585 WP_126053394.1 Tn3 family transposase TnpR_ISMpo10 Transposase
FA702_RS22295 () 150706..151089 - 384 WP_136958218.1 nuclear transport factor 2 family protein -
FA702_RS22300 () 151552..152187 + 636 WP_136958219.1 response regulator transcription factor -
FA702_RS22305 () 152214..152612 - 399 WP_020820526.1 Cu(I)-responsive transcriptional regulator -
FA702_RS22310 () 152609..154966 - 2358 WP_136958220.1 heavy metal translocating P-type ATPase -
FA702_RS22315 () 155074..155748 - 675 WP_017501308.1 class I SAM-dependent methyltransferase -
FA702_RS22320 () 155785..156729 - 945 WP_007406374.1 copper homeostasis membrane protein CopD -
FA702_RS22325 () 156734..157111 - 378 WP_007406420.1 copper homeostasis periplasmic binding protein CopC -
FA702_RS22330 () 157244..157516 + 273 WP_007406394.1 hypothetical protein -
FA702_RS22335 () 157516..157953 + 438 WP_039335535.1 periplasmic heavy metal sensor -
FA702_RS22340 () 157950..158516 + 567 WP_136958221.1 RNA polymerase sigma factor -
FA702_RS22345 () 158583..160535 + 1953 WP_136958222.1 copper resistance system multicopper oxidase -
FA702_RS22350 () 160532..161719 + 1188 WP_136958223.1 copper resistance protein B -
FA702_RS22355 () 161810..162283 + 474 WP_015449253.1 DUF305 domain-containing protein -
FA702_RS22360 () 162343..163878 + 1536 WP_136958224.1 PAS domain S-box protein -
FA702_RS22365 () 163868..164020 + 153 Protein_160 DNA-binding response regulator -
FA702_RS22370 () 164088..164957 - 870 WP_136958213.1 IS21 family transposase ISRel5 Transposase
FA702_RS22375 () 164954..166459 - 1506 WP_136958214.1 IS21 family transposase ISBj11 Transposase
FA702_RS22380 () 166642..167121 + 480 Protein_163 Transcriptional regulatory protein FixJ VF
FA702_RS22385 () 167203..167610 + 408 WP_021245219.1 Response regulator protein TodT VF
FA702_RS22390 () 167672..168640 - 969 WP_004212726.1 magnesium/cobalt transporter CorA -
FA702_RS22395 () 169090..169920 - 831 WP_021245217.1 NADP-dependent 3-hydroxy acid dehydrogenase YdfG VF
FA702_RS22400 () 169990..170556 + 567 WP_004212724.1 TetR family transcriptional regulator -
FA702_RS22405 () 170764..171309 - 546 WP_004212723.1 PepSY domain-containing protein -
FA702_RS22410 () 171426..171833 - 408 WP_004212722.1 single-stranded DNA-binding protein -
FA702_RS22415 () 172149..172691 - 543 Protein_170 transposase family protein -
FA702_RS22420 () 172966..174429 + 1464 WP_162832905.1 IS21 family transposase ISAli13 Transposase
FA702_RS22425 () 174429..175238 + 810 WP_009823666.1 IS21 family transposase ISAli13 Transposase
FA702_RS22430 () 175446..175841 - 396 WP_136958225.1 IS3 family transposase ISPmar2 Transposase
FA702_RS22435 () 175838..176116 - 279 WP_004212720.1 IS3 family transposase ISGbe1 Transposase
FA702_RS22440 () 176379..176588 - 210 WP_004212718.1 cbb3-type cytochrome oxidase assembly protein CcoS -
FA702_RS22445 () 176585..178846 - 2262 WP_136958226.1 cadmium-translocating P-type ATPase -
FA702_RS22450 () 178849..179667 - 819 WP_004212715.1 DUF2189 domain-containing protein -
FA702_RS22460 () 179866..180744 - 879 WP_004212713.1 cytochrome-c oxidase, cbb3-type subunit III -
FA702_RS22465 () 180735..180905 - 171 WP_004212711.1 cbb3-type cytochrome c oxidase subunit 3 -
FA702_RS22470 () 180921..181673 - 753 WP_004212709.1 cytochrome-c oxidase, cbb3-type subunit II -
FA702_RS22475 () 181677..183320 - 1644 WP_004212708.1 cytochrome-c oxidase, cbb3-type subunit I -
FA702_RS22480 () 183666..184025 - 360 WP_072599052.1 META domain-containing protein -
FA702_RS22485 () 184161..184454 - 294 Protein_183 YbaY family lipoprotein -
FA702_RS22490 () 184704..185165 - 462 WP_004212706.1 hypothetical protein -
FA702_RS22495 () 185178..186389 - 1212 WP_004212704.1 NO-inducible flavohemoprotein -
FA702_RS22500 () 186430..186705 - 276 WP_004212703.1 DUF1971 domain-containing protein -
FA702_RS22505 () 186698..187135 - 438 WP_004212701.1 group III truncated hemoglobin -
FA702_RS22510 () 187245..187703 + 459 WP_136958227.1 Rrf2 family transcriptional regulator -
FA702_RS22515 () 187961..188424 + 464 Protein_189 cupin domain-containing protein -
FA702_RS22520 () 188503..190770 + 2268 WP_136958228.1 nitric-oxide reductase large subunit -
FA702_RS22525 () 191480..191908 - 429 WP_021245211.1 TonB-dependent receptor -
FA702_RS22530 () 192110..192838 - 729 WP_025549137.1 IS21 family transposase ISSsp4 Transposase
FA702_RS22535 () 192825..193370 - 546 Protein_193 IS21 family transposase ISSsp4 Transposase
FA702_RS22540 () 193438..194307 - 870 WP_136958213.1 IS21 family transposase ISRel5 Transposase
FA702_RS22545 () 194304..195809 - 1506 WP_136958214.1 IS21 family transposase ISBj11 Transposase
FA702_RS23050 () 196020..196478 + 459 WP_210417679.1 hypothetical protein -
FA702_RS22555 () 196550..196831 - 282 WP_004212690.1 type II toxin-antitoxin system YafQ family toxin Toxin Detail
FA702_RS22560 () 196818..197081 - 264 WP_004212689.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
FA702_RS22565 () 197465..197902 - 438 WP_007683347.1 metal-binding protein -
FA702_RS22570 () 197982..199223 - 1242 WP_007683345.1 MFS transporter -
FA702_RS22575 () 199217..200203 - 987 WP_009823975.1 copper resistance protein B -
FA702_RS22580 () 200200..201906 - 1707 WP_136958154.1 copper resistance system multicopper oxidase -
FA702_RS22585 () 201932..202957 - 1026 WP_044663293.1 alcohol dehydrogenase AdhP -
FA702_RS22590 () 202984..204504 - 1521 WP_015449264.1 aldehyde dehydrogenase -
FA702_RS22595 () 204757..205086 - 330 WP_004212674.1 hypothetical protein -
FA702_RS23055 () 205231..205630 - 400 Protein_206 hypothetical protein -
FA702_RS22600 () 205949..206238 - 290 Protein_207 hypothetical protein -
FA702_RS22605 () 206467..207687 - 1221 Protein_208 glycoside hydrolase family 130 protein -
FA702_RS22610 () 208036..208458 - 423 Protein_209 four-helix bundle copper-binding protein -
FA702_RS22615 () 208473..208917 - 445 Protein_210 DUF1622 domain-containing protein -
FA702_RS23060 () 209290..209640 + 351 WP_210417680.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance