MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93998 bp
Accession: NZ_CP039592 Location: 1..93998 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014862 Replicon: plasmid p11-0500.1
Accession: NZ_CP039592 Location: 1..93998 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014862 Replicon: plasmid p11-0500.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5O05_RS24490 () | 1..741 | + | 741 | WP_063503128.1 | type-F conjugative transfer system secretin TraK | - |
| E5O05_RS24495 () | 741..2162 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| E5O05_RS24500 () | 2152..2748 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| E5O05_RS24505 () | 2726..2971 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| E5O05_RS24510 () | 2968..3483 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E5O05_RS24515 () | 3618..3839 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| E5O05_RS24520 () | 3832..4299 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| E5O05_RS24525 () | 4416..4679 | + | 264 | WP_001239256.1 | hypothetical protein | - |
| E5O05_RS24530 () | 4695..7343 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| E5O05_RS24535 () | 7318..7704 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| E5O05_RS24540 () | 7701..8333 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| E5O05_RS24545 () | 8330..9322 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| E5O05_RS24550 () | 9341..9649 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| E5O05_RS24555 () | 9634..10272 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E5O05_RS24560 () | 10309..10728 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| E5O05_RS24565 () | 10725..12551 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E5O05_RS24570 () | 12562..12777 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| E5O05_RS24575 () | 12789..13538 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E5O05_RS24580 () | 13752..14045 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E5O05_RS24585 () | 14032..14580 | + | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E5O05_RS24590 () | 14570..15952 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| E5O05_RS24595 () | 15949..18771 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E5O05_RS24600 () | 18787..19281 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| E5O05_RS24605 () | 19317..20048 | + | 732 | WP_022743186.1 | complement resistance protein TraT | - |
| E5O05_RS24610 () | 20425..22704 | + | 2280 | WP_110029902.1 | type IV conjugative transfer system coupling protein TraD | - |
| E5O05_RS24615 () | 22713..23111 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E5O05_RS24620 () | 23111..23341 | - | 231 | WP_001526804.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E5O05_RS24625 () | 23420..28678 | + | 5259 | WP_022743192.1 | conjugative transfer relaxase/helicase TraI | - |
| E5O05_RS24630 () | 28698..29438 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| E5O05_RS24635 () | 29493..30056 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| E5O05_RS24640 () | 30171..30455 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| E5O05_RS24645 () | 30468..30623 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| E5O05_RS24650 () | 30789..31231 | + | 443 | Protein_33 | phospholipase | - |
| E5O05_RS24660 () | 31410..31676 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| E5O05_RS24665 () | 31926..32003 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E5O05_RS24670 () | 31984..32865 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| E5O05_RS24680 () | 33725..33946 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| E5O05_RS24685 () | 34043..34801 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| E5O05_RS24690 () | 35068..35625 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| E5O05_RS24695 () | 35715..36614 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| E5O05_RS24705 () | 36747..37400 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| E5O05_RS24710 () | 37645..37995 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| E5O05_RS24715 () | 37980..38192 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| E5O05_RS24720 () | 38624..39499 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| E5O05_RS24725 () | 39752..40309 | - | 558 | WP_010999940.1 | membrane protein | - |
| E5O05_RS24730 () | 40324..41016 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| E5O05_RS24735 () | 41009..43417 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| E5O05_RS24740 () | 43645..44163 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| E5O05_RS24745 () | 44438..44740 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| E5O05_RS24755 () | 45459..45840 | + | 382 | Protein_50 | NirD/YgiW/YdeI family stress tolerance protein | - |
| E5O05_RS24760 () | 46117..46453 | + | 337 | Protein_51 | site-specific integrase | - |
| E5O05_RS24765 () | 46712..47701 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| E5O05_RS24770 () | 48195..48491 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| E5O05_RS24780 () | 48975..49496 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| E5O05_RS24785 () | 50172..50390 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E5O05_RS24790 () | 50392..50697 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E5O05_RS24795 () | 50699..50989 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| E5O05_RS24800 () | 50986..51507 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| E5O05_RS24805 () | 51542..52324 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| E5O05_RS24810 () | 52333..53046 | + | 714 | Protein_60 | EAL domain-containing protein | - |
| E5O05_RS24820 () | 53050..53559 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| E5O05_RS24825 () | 53553..54038 | + | 486 | WP_000905606.1 | membrane protein | - |
| E5O05_RS24830 () | 54315..54602 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| E5O05_RS24835 () | 54758..55318 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| E5O05_RS24840 () | 55385..55735 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| E5O05_RS24845 () | 55792..56216 | + | 425 | Protein_66 | IS200/IS605 family transposase | - |
| E5O05_RS24850 () | 56343..56993 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| E5O05_RS24855 () | 57254..57979 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| E5O05_RS24860 () | 58260..60035 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| E5O05_RS24865 () | 60217..60984 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| E5O05_RS24870 () | 61158..61322 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| E5O05_RS24875 () | 61496..62389 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| E5O05_RS24880 () | 62998..64035 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| E5O05_RS24885 () | 64224..65249 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| E5O05_RS24890 () | 65182..66846 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| E5O05_RS24895 () | 66830..67390 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| E5O05_RS24900 () | 67597..68337 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| E5O05_RS24910 () | 68992..69480 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| E5O05_RS24915 () | 69739..70854 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| E5O05_RS24920 () | 70940..71356 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| E5O05_RS24925 () | 71540..71875 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| E5O05_RS24930 () | 71932..72498 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| E5O05_RS24935 () | 72530..73471 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E5O05_RS24940 () | 73886..75091 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| E5O05_RS24945 () | 75091..76065 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O05_RS24950 () | 76147..77421 | - | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| E5O05_RS24955 () | 77421..77843 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E5O05_RS24960 () | 78354..78824 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| E5O05_RS24965 () | 78817..79173 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| E5O05_RS24975 () | 79555..80235 | + | 681 | WP_000088645.1 | DNA methylase | - |
| E5O05_RS24980 () | 80235..80456 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| E5O05_RS24985 () | 80512..80925 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| E5O05_RS24990 () | 80997..81761 | + | 765 | WP_001246548.1 | membrane protein | - |
| E5O05_RS25000 () | 82200..82691 | + | 492 | WP_149143712.1 | antirestriction protein | - |
| E5O05_RS25005 () | 82758..83192 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| E5O05_RS25010 () | 83428..83751 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| E5O05_RS25020 () | 84500..85018 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| E5O05_RS25025 () | 85073..85315 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| E5O05_RS25030 () | 85384..87381 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O05_RS25035 () | 87421..87855 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| E5O05_RS25040 () | 87852..88589 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| E5O05_RS25045 () | 89099..89500 | + | 402 | Protein_102 | DUF945 domain-containing protein | - |
| E5O05_RS25050 () | 89562..89917 | + | 356 | Protein_103 | DUF945 domain-containing protein | - |
| E5O05_RS25055 () | 90228..90698 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| E5O05_RS25065 () | 91113..91493 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| E5O05_RS25070 () | 91686..92372 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| E5O05_RS25075 () | 92467..92694 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| E5O05_RS25080 () | 92736..93098 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| E5O05_RS25085 () | 93113..93424 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|