MGE detailed information
MGE type: Genomic_island MGE length: 10486 bp
Accession: NZ_CP039502 Location: 1042186..1052671 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 Replicon: chromosome
Accession: NZ_CP039502 Location: 1042186..1052671 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEB0189_RS05425 (1038767) | 1038767..1039165 | + | 399 | Protein_978 | cytoplasmic protein | - |
| SEEB0189_RS05430 (1039376) | 1039376..1039594 | + | 219 | Protein_979 | hypothetical protein | - |
| SEEB0189_RS05435 (1039751) | 1039751..1040419 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| SEEB0189_RS05440 (1040446) | 1040446..1040940 | + | 495 | WP_000424947.1 | hypothetical protein | - |
| SEEB0189_RS05445 (1041111) | 1041111..1041767 | - | 657 | WP_020839120.1 | protein-serine/threonine phosphatase | - |
| SEEB0189_RS05450 (1042000) | 1042000..1042410 | + | 411 | Protein_983 | IS5 family transposase ISEcl3 | Transposase |
| SEEB0189_RS05455 (1042483) | 1042483..1043010 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| SEEB0189_RS05460 (1043007) | 1043007..1043297 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| SEEB0189_RS05465 (1043567) | 1043567..1043756 | - | 190 | Protein_986 | IS3 family transposase | - |
| SEEB0189_RS05470 (1043997) | 1043997..1044323 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| SEEB0189_RS05475 (1044596) | 1044596..1044943 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| SEEB0189_RS05480 (1044928) | 1044928..1045377 | - | 450 | WP_000381612.1 | membrane protein | - |
| SEEB0189_RS05485 (1045809) | 1045809..1046252 | - | 444 | WP_000715096.1 | hypothetical protein | VF |
| SEEB0189_RS05490 (1046708) | 1046708..1047358 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| SEEB0189_RS05495 (1047355) | 1047355..1049043 | + | 1689 | WP_000848114.1 | hypothetical protein | VF |
| SEEB0189_RS05500 (1049040) | 1049040..1050158 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| SEEB0189_RS05505 (1050183) | 1050183..1052240 | + | 2058 | WP_000927219.1 | hypothetical protein | VF |
| SEEB0189_RS05510 (1052264) | 1052264..1052671 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| SEEB0189_RS05515 (1052668) | 1052668..1053963 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| SEEB0189_RS05520 (1053941) | 1053941..1054384 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| SEEB0189_RS05525 (1054384) | 1054384..1055394 | + | 1011 | WP_000503108.1 | SPI-1 type III secretion system protein SpaN | - |
| SEEB0189_RS05530 (1055394) | 1055394..1056305 | + | 912 | WP_000058739.1 | SPI-1 type III secretion system protein SpaO | - |
| SEEB0189_RS05535 (1056295) | 1056295..1056969 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| SEEB0189_RS05540 (1056995) | 1056995..1057255 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |