MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81929 bp
Accession: NZ_CP039485 Location: 1..81929 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000952 Replicon: plasmid pCFSAN000952
Accession: NZ_CP039485 Location: 1..81929 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000952 Replicon: plasmid pCFSAN000952
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3399_RS23015 () | 665..1039 | - | 375 | WP_020833566.1 | hypothetical protein | - |
| E3399_RS23020 () | 1394..1747 | - | 354 | WP_020833567.1 | hypothetical protein | - |
| E3399_RS23025 () | 1744..2472 | - | 729 | WP_020833568.1 | plasmid SOS inhibition protein A | - |
| E3399_RS23030 () | 2469..2903 | - | 435 | WP_015059789.1 | conjugation system SOS inhibitor PsiB | - |
| E3399_RS23035 () | 2944..4977 | - | 2034 | WP_020833569.1 | ParB/RepB/Spo0J family partition protein | - |
| E3399_RS23040 () | 5048..5290 | - | 243 | WP_024143550.1 | DUF905 domain-containing protein | - |
| E3399_RS23045 () | 5343..5897 | - | 555 | WP_020833571.1 | single-stranded DNA-binding protein | - |
| E3399_RS23555 () | 6228..6449 | + | 222 | WP_114053208.1 | hypothetical protein | - |
| E3399_RS23055 () | 6590..6906 | - | 317 | Protein_8 | hypothetical protein | - |
| E3399_RS23060 () | 6941..7194 | - | 254 | Protein_9 | DNA polymerase III subunit theta | - |
| E3399_RS23065 () | 7387..7578 | - | 192 | WP_020833574.1 | hypothetical protein | - |
| E3399_RS23070 () | 7621..8127 | - | 507 | WP_020833575.1 | antirestriction protein ArdA | - |
| E3399_RS23075 () | 8533..9312 | - | 780 | WP_020833576.1 | hypothetical protein | - |
| E3399_RS23080 () | 9367..9786 | - | 420 | WP_020833577.1 | DUF1380 domain-containing protein | - |
| E3399_RS23085 () | 9797..10018 | - | 222 | WP_020833578.1 | hypothetical protein | - |
| E3399_RS23090 () | 10018..10695 | - | 678 | WP_020833579.1 | DNA methylase | - |
| E3399_RS23095 () | 11055..11726 | + | 672 | WP_020833580.1 | SOS response-associated peptidase family protein | - |
| E3399_RS23100 () | 11906..12329 | + | 424 | Protein_17 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E3399_RS23105 () | 12329..13603 | + | 1275 | WP_020833581.1 | Y-family DNA polymerase | - |
| E3399_RS23110 () | 13685..14659 | - | 975 | WP_020833582.1 | ParB/RepB/Spo0J family partition protein | - |
| E3399_RS23115 () | 14659..15864 | - | 1206 | WP_000427674.1 | AAA family ATPase | - |
| E3399_RS23120 () | 16552..16806 | - | 255 | WP_001749329.1 | hypothetical protein | - |
| E3399_RS23125 () | 17437..18378 | + | 942 | WP_000728920.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3399_RS23130 () | 18529..19311 | - | 783 | WP_020833584.1 | site-specific integrase | - |
| E3399_RS23135 () | 19620..19925 | - | 306 | WP_020833585.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3399_RS23140 () | 19927..20145 | - | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3399_RS23145 () | 20965..21336 | - | 372 | WP_100215268.1 | DUF1311 domain-containing protein | - |
| E3399_RS23150 () | 22124..22846 | - | 723 | WP_000742239.1 | LuxR C-terminal-related transcriptional regulator | - |
| E3399_RS23155 () | 23045..24097 | - | 1053 | WP_020833588.1 | Ig-like domain-containing protein | - |
| E3399_RS23160 () | 24109..26856 | - | 2748 | WP_023193067.1 | inverse autotransporter beta domain-containing protein | - |
| E3399_RS23165 () | 27550..28101 | + | 552 | WP_020833590.1 | hypothetical protein | - |
| E3399_RS23170 () | 28181..29380 | - | 1200 | WP_020833591.1 | IS256 family transposase | - |
| E3399_RS23175 () | 29756..30463 | + | 708 | WP_020833592.1 | molecular chaperone | - |
| E3399_RS23180 () | 30483..30854 | + | 372 | WP_136556036.1 | hypothetical protein | - |
| E3399_RS23185 () | 30863..32908 | + | 2046 | WP_136556037.1 | fimbrial biogenesis outer membrane usher protein | - |
| E3399_RS23190 () | 33065..33212 | - | 148 | Protein_35 | transposase | - |
| E3399_RS23200 () | 34431..34676 | + | 246 | WP_131535392.1 | hypothetical protein | - |
| E3399_RS23205 () | 34823..34993 | + | 171 | Protein_37 | transposase | - |
| E3399_RS23560 () | 34981..35286 | + | 306 | WP_023193066.1 | hypothetical protein | - |
| E3399_RS23565 () | 35651..36109 | + | 459 | WP_086790286.1 | LysR family transcriptional regulator | - |
| E3399_RS23215 () | 36199..36684 | + | 486 | Protein_40 | transposase | - |
| E3399_RS23220 () | 37166..38626 | + | 1461 | WP_000834698.1 | hypothetical protein | - |
| E3399_RS23225 () | 38642..39034 | + | 393 | Protein_42 | transposase family protein | - |
| E3399_RS23230 () | 39215..39916 | - | 702 | WP_023251326.1 | transcriptional activator SprB | - |
| E3399_RS23235 () | 40113..41102 | - | 990 | WP_136556038.1 | helix-turn-helix transcriptional regulator | - |
| E3399_RS23240 () | 41411..41920 | - | 510 | WP_131535394.1 | hypothetical protein | - |
| E3399_RS23245 () | 43165..43755 | + | 591 | WP_031607984.1 | plasmid pRiA4b ORF-3 family protein | - |
| E3399_RS23250 () | 43907..44188 | - | 282 | WP_000970006.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| E3399_RS23255 () | 44185..44454 | - | 270 | WP_000084547.1 | hypothetical protein | Antitoxin Detail |
| E3399_RS23265 () | 45410..46291 | - | 882 | WP_023193063.1 | incFII family plasmid replication initiator RepA | - |
| E3399_RS23270 () | 46272..46349 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E3399_RS23275 () | 46599..46865 | - | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| E3399_RS23280 () | 47009..47479 | - | 471 | Protein_52 | phospholipase D family protein | - |
| E3399_RS23285 () | 47719..48450 | - | 732 | WP_020833545.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E3399_RS23290 () | 48447..49013 | - | 567 | WP_000493830.1 | DUF2726 domain-containing protein | - |
| E3399_RS23295 () | 49032..54335 | - | 5304 | WP_020833546.1 | conjugative transfer relaxase/helicase TraI | - |
| E3399_RS23300 () | 54335..56569 | - | 2235 | WP_020833547.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3399_RS23305 () | 56720..57457 | - | 738 | WP_020833548.1 | complement resistance protein TraT | - |
| E3399_RS23310 () | 57633..58193 | - | 561 | WP_020833549.1 | hypothetical protein | - |
| E3399_RS23315 () | 58205..61102 | - | 2898 | WP_020833550.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3399_RS23320 () | 61104..62465 | - | 1362 | WP_020833551.1 | F-type conjugal transfer protein TraH | - |
| E3399_RS23325 () | 62465..63076 | - | 612 | WP_020833552.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3399_RS23330 () | 63098..63877 | - | 780 | WP_004558353.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3399_RS23335 () | 63874..65727 | - | 1854 | WP_020833553.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3399_RS23340 () | 65724..66338 | - | 615 | WP_020833554.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3399_RS23345 () | 66335..66703 | - | 369 | WP_020833555.1 | hypothetical protein | - |
| E3399_RS23350 () | 66714..67709 | - | 996 | WP_004558357.1 | conjugal transfer pilus assembly protein TraU | - |
| E3399_RS23355 () | 67706..68341 | - | 636 | WP_000715590.1 | type-F conjugative transfer system protein TraW | - |
| E3399_RS23360 () | 68341..68805 | - | 465 | WP_024143549.1 | type-F conjugative transfer system protein TrbI | - |
| E3399_RS23365 () | 68802..71393 | - | 2592 | WP_001808381.1 | type IV secretion system protein TraC | - |
| E3399_RS23370 () | 71404..72018 | - | 615 | WP_020833557.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3399_RS23375 () | 72036..72488 | - | 453 | WP_020833558.1 | hypothetical protein | - |
| E3399_RS23380 () | 72492..72716 | - | 225 | WP_008455352.1 | TraR/DksA C4-type zinc finger protein | - |
| E3399_RS23385 () | 72827..74188 | - | 1362 | WP_000024509.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E3399_RS23390 () | 74175..74915 | - | 741 | WP_020833560.1 | type-F conjugative transfer system secretin TraK | - |
| E3399_RS23395 () | 74905..75468 | - | 564 | WP_001535119.1 | type IV conjugative transfer system protein TraE | - |
| E3399_RS23400 () | 75488..75793 | - | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| E3399_RS23405 () | 75795..76154 | - | 360 | WP_001054221.1 | type IV conjugative transfer system pilin TraA | - |
| E3399_RS23410 () | 76271..76504 | - | 234 | WP_000662610.1 | TraY domain-containing protein | - |
| E3399_RS23415 () | 76710..77159 | - | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| E3399_RS23420 () | 77456..77836 | - | 381 | WP_020833562.1 | relaxosome protein TraM | - |
| E3399_RS23425 () | 78305..78760 | + | 456 | WP_020833563.1 | transglycosylase SLT domain-containing protein | - |
| E3399_RS23430 () | 78771..79301 | - | 531 | WP_000556935.1 | antirestriction protein | - |
| E3399_RS23435 () | 79948..80772 | - | 825 | WP_020833564.1 | N-6 DNA methylase | - |
| E3399_RS23440 () | 80819..80965 | - | 147 | WP_001159046.1 | hypothetical protein | - |
| E3399_RS23445 () | 81060..81407 | - | 348 | WP_000550116.1 | hypothetical protein | - |
| E3399_RS23450 () | 81464..81868 | - | 405 | WP_020833565.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|