MGE detailed information
MGE type: Conjugative plasmid MGE length: 105771 bp
Accession: NZ_CP039299 Location: 1..105771 Organism: Escherichia coli strain PigCaeca_1 Replicon: plasmid unnamed1
Accession: NZ_CP039299 Location: 1..105771 Organism: Escherichia coli strain PigCaeca_1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E7Z58_RS23375 () | 46..1077 | + | 1032 | WP_136360489.1 | replication initiation protein | - |
| E7Z58_RS24450 () | 1775..1933 | + | 159 | WP_001470858.1 | hypothetical protein | - |
| E7Z58_RS23390 () | 1988..2257 | + | 270 | WP_063848275.1 | hypothetical protein | Antitoxin Detail |
| E7Z58_RS23395 () | 2254..2535 | + | 282 | WP_136360490.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E7Z58_RS23400 () | 2581..3192 | + | 612 | Protein_4 | 3'-5' exonuclease | - |
| E7Z58_RS23405 () | 3333..4506 | - | 1174 | Protein_5 | IS91 family transposase | - |
| E7Z58_RS23410 () | 4469..4870 | - | 402 | WP_000124097.1 | hypothetical protein | - |
| E7Z58_RS23415 () | 4959..5243 | + | 285 | Protein_7 | 3'-5' exonuclease | - |
| E7Z58_RS23420 () | 5360..5842 | + | 483 | WP_001402899.1 | hypothetical protein | - |
| E7Z58_RS23425 () | 6850..7794 | + | 945 | WP_001376111.1 | Abi family protein | - |
| E7Z58_RS23435 () | 8076..9045 | + | 970 | Protein_10 | IS110 family transposase ISEc45 | Transposase |
| E7Z58_RS23440 () | 9264..9854 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| E7Z58_RS23445 () | 9991..10563 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| E7Z58_RS23450 () | 10600..11991 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| E7Z58_RS23455 () | 12024..12452 | + | 429 | Protein_14 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| E7Z58_RS23460 () | 12771..13427 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| E7Z58_RS23465 () | 13818..14075 | - | 258 | Protein_16 | ISKra4 family transposase | - |
| E7Z58_RS23470 () | 14129..14833 | - | 705 | WP_001067858.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| E7Z58_RS23475 () | 14897..15382 | + | 486 | Protein_18 | Tn3 family transposase TnpR_Tn3 | Transposase |
| E7Z58_RS23480 () | 15459..16850 | + | 1392 | WP_000085084.1 | SIR2 family protein | - |
| E7Z58_RS23485 () | 16847..18919 | + | 2073 | WP_001084041.1 | DUF87 domain-containing protein | - |
| E7Z58_RS23495 () | 19109..19348 | - | 240 | WP_000371884.1 | hypothetical protein | - |
| E7Z58_RS23500 () | 19622..20113 | + | 492 | WP_000528930.1 | hypothetical protein | - |
| E7Z58_RS23505 () | 20125..20883 | + | 759 | WP_000494510.1 | hypothetical protein | - |
| E7Z58_RS23510 () | 21105..22697 | + | 1593 | WP_001350003.1 | hypothetical protein | - |
| E7Z58_RS23515 () | 22732..23856 | + | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| E7Z58_RS23520 () | 23856..24146 | + | 291 | WP_000648897.1 | hypothetical protein | - |
| E7Z58_RS23530 () | 24937..25251 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| E7Z58_RS23535 () | 25304..26083 | + | 780 | WP_000535296.1 | hypothetical protein | - |
| E7Z58_RS23540 () | 26134..26913 | + | 780 | WP_001302707.1 | site-specific integrase | - |
| E7Z58_RS23545 () | 27051..27326 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| E7Z58_RS23550 () | 27320..27964 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| E7Z58_RS23555 () | 28193..29164 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| E7Z58_RS23560 () | 29169..29561 | + | 393 | WP_136360491.1 | plasmid partitioning/stability family protein | - |
| E7Z58_RS23565 () | 29566..30837 | - | 1272 | WP_136360492.1 | Y-family DNA polymerase | - |
| E7Z58_RS23570 () | 30837..31274 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E7Z58_RS23575 () | 31271..31519 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| E7Z58_RS23590 () | 31938..32840 | + | 903 | WP_168732881.1 | DUF1281 domain-containing protein | - |
| E7Z58_RS23595 () | 32837..33149 | + | 313 | Protein_38 | hypothetical protein | - |
| E7Z58_RS23600 () | 33225..33908 | + | 684 | WP_000086135.1 | DNA methylase | - |
| E7Z58_RS23605 () | 33909..34130 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| E7Z58_RS23610 () | 34144..34578 | + | 435 | WP_136360494.1 | DUF1380 family protein | - |
| E7Z58_RS24520 () | 34623..35393 | + | 771 | WP_089613079.1 | hypothetical protein | - |
| E7Z58_RS23620 () | 35929..36231 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| E7Z58_RS23625 () | 36278..36700 | + | 423 | WP_042974081.1 | DUF1380 family protein | - |
| E7Z58_RS23630 () | 36697..36888 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| E7Z58_RS23640 () | 36960..37274 | + | 315 | WP_136360496.1 | hypothetical protein | - |
| E7Z58_RS23650 () | 37658..38185 | + | 528 | WP_049024300.1 | single-stranded DNA-binding protein | - |
| E7Z58_RS23655 () | 38243..38476 | + | 234 | WP_136360497.1 | DUF905 domain-containing protein | - |
| E7Z58_RS23660 () | 38535..40493 | + | 1959 | WP_136360498.1 | ParB/RepB/Spo0J family partition protein | - |
| E7Z58_RS23665 () | 40548..40982 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| E7Z58_RS23670 () | 40979..41698 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| E7Z58_RS23675 () | 41695..42291 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| E7Z58_RS23685 () | 42754..43254 | + | 501 | WP_000117621.1 | antirestriction protein ArdA | - |
| E7Z58_RS24465 () | 43559..43738 | + | 180 | WP_001690646.1 | hypothetical protein | - |
| E7Z58_RS23700 () | 43982..44416 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| E7Z58_RS23705 () | 44508..44774 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| E7Z58_RS23710 () | 44839..45780 | + | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| E7Z58_RS24470 () | 45842..46012 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| E7Z58_RS23715 () | 46043..46294 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| E7Z58_RS24525 () | 46328..46525 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| E7Z58_RS23730 () | 46874..47722 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| E7Z58_RS23735 () | 47807..48142 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| E7Z58_RS23740 () | 48376..48708 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| E7Z58_RS23745 () | 48719..51421 | + | 2703 | WP_024168875.1 | Protein TraI | Relaxase |
| E7Z58_RS23750 () | 51544..52362 | + | 819 | WP_001760750.1 | DUF2971 domain-containing protein | - |
| E7Z58_RS23755 () | 52435..54726 | - | 2292 | WP_024168876.1 | hypothetical protein | - |
| E7Z58_RS23760 () | 54719..55789 | - | 1071 | WP_136360499.1 | IncI1-type conjugal transfer protein TrbB | - |
| E7Z58_RS23765 () | 55808..57016 | - | 1209 | WP_001493816.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 57196..57256 | - | 61 | NuclAT_0 | - | - |
| - () | 57196..57256 | - | 61 | NuclAT_0 | - | - |
| - () | 57196..57256 | - | 61 | NuclAT_0 | - | - |
| - () | 57196..57256 | - | 61 | NuclAT_0 | - | - |
| E7Z58_RS23770 () | 57384..58724 | + | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| E7Z58_RS23775 () | 59161..59493 | - | 333 | WP_001301033.1 | protein FlxA | - |
| E7Z58_RS23780 () | 59696..60001 | - | 306 | WP_071593935.1 | hypothetical protein | - |
| E7Z58_RS23785 () | 60026..60265 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| E7Z58_RS23790 () | 60265..60552 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| E7Z58_RS23795 () | 60624..60776 | + | 153 | WP_001387489.1 | Hok/Gef family protein | - |
| E7Z58_RS23800 () | 60848..61099 | - | 252 | WP_024171163.1 | hypothetical protein | - |
| - () | 61493..61544 | - | 52 | NuclAT_1 | - | - |
| - () | 61493..61544 | - | 52 | NuclAT_1 | - | - |
| - () | 61493..61544 | - | 52 | NuclAT_1 | - | - |
| - () | 61493..61544 | - | 52 | NuclAT_1 | - | - |
| E7Z58_RS24475 () | 62030..62206 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| E7Z58_RS23810 () | 62415..62624 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| E7Z58_RS23815 () | 62722..63384 | - | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| E7Z58_RS23820 () | 63455..65623 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| E7Z58_RS23825 () | 65720..66304 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| E7Z58_RS23830 () | 66333..67535 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| E7Z58_RS23835 () | 67502..68116 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| E7Z58_RS23840 () | 68116..71160 | - | 3045 | WP_136360500.1 | IncI1-type conjugal transfer protein TraU | - |
| E7Z58_RS23845 () | 71250..72050 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| E7Z58_RS23850 () | 72034..72222 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| E7Z58_RS23855 () | 72286..72690 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| E7Z58_RS23860 () | 72741..73268 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| E7Z58_RS23865 () | 73268..73972 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| E7Z58_RS23870 () | 73972..75261 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| E7Z58_RS23875 () | 75264..76247 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| E7Z58_RS23880 () | 76258..76950 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| E7Z58_RS23885 () | 76947..77294 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| E7Z58_RS23890 () | 77312..81079 | - | 3768 | WP_136360501.1 | DNA primase | - |
| E7Z58_RS23895 () | 81169..81720 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| E7Z58_RS23900 () | 81735..82025 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| E7Z58_RS23905 () | 82022..83170 | - | 1149 | WP_001024975.1 | putative protein YggR | VF |
| E7Z58_RS23910 () | 83167..83985 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| E7Z58_RS23915 () | 83982..84440 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| E7Z58_RS23920 () | 84835..85419 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| E7Z58_RS23925 () | 85479..86681 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| E7Z58_RS23930 () | 86767..87591 | - | 825 | WP_136360502.1 | conjugal transfer protein TraE | - |
| E7Z58_RS23935 () | 87742..88896 | - | 1155 | WP_001139955.1 | integrase | - |
| E7Z58_RS23945 () | 89247..90460 | + | 1214 | WP_168732880.1 | IS3 family transposase IS629 | Transposase |
| E7Z58_RS23950 () | 90521..91855 | - | 1335 | WP_112413233.1 | hypothetical protein | VF |
| E7Z58_RS23955 () | 91855..92511 | - | 657 | WP_136360505.1 | hypothetical protein | VF |
| E7Z58_RS23960 () | 92496..93056 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| E7Z58_RS23965 () | 93066..93680 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| E7Z58_RS23970 () | 93697..94782 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| E7Z58_RS23975 () | 94795..96348 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| E7Z58_RS23980 () | 96359..96811 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| E7Z58_RS23985 () | 96798..98093 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| E7Z58_RS23990 () | 98086..99768 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| E7Z58_RS23995 () | 99782..100219 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| E7Z58_RS24000 () | 100219..101286 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| E7Z58_RS24010 () | 102038..102292 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| E7Z58_RS24020 () | 102464..103147 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| E7Z58_RS24030 () | 103401..103934 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| E7Z58_RS24040 () | 104376..104663 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| E7Z58_RS24045 () | 104581..104844 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|