MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 141973 bp
Accession: NZ_CP039293 Location: 5080588..5222560 Organism: Pseudomonas aeruginosa strain PABL048 Replicon: chromosome
Accession: NZ_CP039293 Location: 5080588..5222560 Organism: Pseudomonas aeruginosa strain PABL048 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DZ927_RS24470 () | 5076087..5076359 | + | 273 | WP_019486317.1 | cysteine-rich CWC family protein | - |
| DZ927_RS24475 () | 5076359..5077051 | + | 693 | WP_003085458.1 | 16S rRNA pseudouridine(516) synthase | - |
| DZ927_RS24480 () | 5077187..5078230 | + | 1044 | WP_019486316.1 | L,D-transpeptidase | - |
| DZ927_RS24485 () | 5078310..5079047 | + | 738 | WP_019486315.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| DZ927_RS24490 () | 5079499..5080401 | + | 903 | WP_003085447.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| DZ927_RS24500 () | 5080844..5082697 | + | 1854 | WP_019486314.1 | Thioredoxin 1 ; Integrase | Integrase |
| DZ927_RS24505 () | 5082733..5083176 | - | 444 | WP_013721909.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| DZ927_RS24510 () | 5083258..5085660 | + | 2403 | WP_013721908.1 | cadmium-translocating P-type ATPase | - |
| DZ927_RS24515 () | 5085657..5086736 | + | 1080 | WP_013721907.1 | PCP degradation transcriptional activation protein | VF |
| DZ927_RS24520 () | 5086740..5086904 | + | 165 | Protein_4736 | Tn3 family transposase | - |
| DZ927_RS24525 () | 5086918..5087544 | - | 627 | WP_025991876.1 | substrate-binding domain-containing protein | - |
| DZ927_RS24530 () | 5087651..5087950 | + | 300 | WP_003282197.1 | helix-turn-helix domain-containing protein | - |
| DZ927_RS24535 () | 5087977..5089812 | - | 1836 | WP_033949193.1 | TraI domain-containing protein | - |
| DZ927_RS24540 () | 5090016..5090936 | - | 921 | WP_013982150.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| DZ927_RS24545 () | 5090929..5091687 | - | 759 | WP_033949182.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| DZ927_RS24550 () | 5091911..5092279 | + | 369 | WP_019485131.1 | DUF3742 family protein | - |
| DZ927_RS24555 () | 5092308..5093840 | - | 1533 | WP_033949179.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DZ927_RS24560 () | 5093856..5094209 | - | 354 | WP_003292115.1 | hypothetical protein | - |
| DZ927_RS24565 () | 5094206..5095612 | - | 1407 | WP_033949177.1 | integrating conjugative element protein | - |
| DZ927_RS24570 () | 5095623..5096567 | - | 945 | WP_003140984.1 | TIGR03756 family integrating conjugative element protein | - |
| DZ927_RS24575 () | 5096564..5097013 | - | 450 | WP_019485267.1 | TIGR03757 family integrating conjugative element protein | - |
| DZ927_RS24580 () | 5097182..5097676 | - | 495 | WP_003140985.1 | DNA repair protein RadC | - |
| DZ927_RS24585 () | 5097872..5098615 | - | 744 | WP_003140986.1 | thioredoxin domain-containing protein | - |
| DZ927_RS24590 () | 5098629..5101517 | - | 2889 | WP_033960493.1 | conjugative transfer ATPase | - |
| DZ927_RS24595 () | 5101517..5101951 | - | 435 | WP_023094193.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| DZ927_RS24600 () | 5101932..5103365 | - | 1434 | WP_033949175.1 | TIGR03752 family integrating conjugative element protein | - |
| DZ927_RS24605 () | 5103355..5104269 | - | 915 | WP_033949172.1 | TIGR03749 family integrating conjugative element protein | - |
| DZ927_RS24610 () | 5104266..5104958 | - | 693 | WP_033949170.1 | TIGR03746 family integrating conjugative element protein | - |
| DZ927_RS24615 () | 5104955..5105365 | - | 411 | WP_019484538.1 | TIGR03750 family conjugal transfer protein | - |
| DZ927_RS24620 () | 5105378..5105746 | - | 369 | WP_011805412.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| DZ927_RS24625 () | 5105769..5106008 | - | 240 | WP_003294214.1 | TIGR03758 family integrating conjugative element protein | - |
| DZ927_RS24630 () | 5106005..5106376 | - | 372 | WP_023085007.1 | RAQPRD family integrative conjugative element protein | - |
| DZ927_RS24640 () | 5106771..5106974 | + | 204 | WP_003294212.1 | helix-turn-helix domain-containing protein | - |
| DZ927_RS24645 () | 5106981..5107595 | + | 615 | WP_003294211.1 | DUF1819 family protein | - |
| DZ927_RS24650 () | 5107613..5108203 | + | 591 | WP_023085006.1 | DUF1788 domain-containing protein | - |
| DZ927_RS24655 () | 5108234..5111815 | + | 3582 | WP_019485333.1 | BREX system P-loop protein BrxC | - |
| DZ927_RS24660 () | 5111815..5113635 | + | 1821 | WP_019485332.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| DZ927_RS24665 () | 5113632..5114774 | + | 1143 | WP_019485331.1 | ATP-binding protein | - |
| DZ927_RS24670 () | 5114771..5115295 | + | 525 | WP_019485330.1 | hypothetical protein | - |
| DZ927_RS24675 () | 5115315..5116676 | + | 1362 | WP_019485329.1 | SIR2 family protein | - |
| DZ927_RS24680 () | 5116673..5118775 | + | 2103 | WP_019485328.1 | ATP-binding protein | - |
| DZ927_RS24685 () | 5118738..5120543 | + | 1806 | WP_100247842.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| DZ927_RS24690 () | 5120556..5123054 | + | 2499 | WP_019485326.1 | BREX-1 system phosphatase PglZ type A | - |
| DZ927_RS24695 () | 5123069..5125138 | + | 2070 | WP_014819593.1 | BREX system Lon protease-like protein BrxL | - |
| DZ927_RS24700 () | 5125143..5127719 | + | 2577 | WP_019485325.1 | hypothetical protein | - |
| DZ927_RS24705 () | 5127724..5128953 | + | 1230 | WP_019485324.1 | exonuclease SbcCD subunit D C-terminal domain-containing protein | - |
| DZ927_RS24710 () | 5128965..5132240 | + | 3276 | WP_019485323.1 | AAA family ATPase | - |
| DZ927_RS24715 () | 5132248..5133633 | + | 1386 | WP_025991815.1 | hypothetical protein | - |
| DZ927_RS24720 () | 5133635..5134384 | - | 750 | WP_019485321.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| DZ927_RS24725 () | 5134381..5136537 | - | 2157 | WP_016851988.1 | type IV conjugative transfer system coupling protein TraD | - |
| DZ927_RS24730 () | 5136546..5137079 | - | 534 | WP_003141015.1 | integrating conjugative element protein | - |
| DZ927_RS24735 () | 5137076..5137696 | - | 621 | WP_023123937.1 | Primosomal protein N' | VF |
| DZ927_RS24740 () | 5137681..5138400 | - | 720 | WP_016851990.1 | TIGR03759 family integrating conjugative element protein | - |
| DZ927_RS24745 () | 5138487..5139134 | - | 648 | WP_016851991.1 | hypothetical protein | - |
| DZ927_RS24750 () | 5139131..5139700 | - | 570 | WP_016851992.1 | ATP-dependent protease subunit HslV | VF |
| DZ927_RS24755 () | 5139898..5142171 | - | 2274 | WP_016851993.1 | DEAD/DEAH box helicase | - |
| DZ927_RS24760 () | 5142271..5142576 | - | 306 | WP_016851994.1 | hypothetical protein | - |
| DZ927_RS24765 () | 5142678..5143787 | - | 1110 | WP_031641641.1 | SAM-dependent methyltransferase | - |
| DZ927_RS24770 () | 5143853..5144503 | - | 651 | WP_031641642.1 | hypothetical protein | - |
| DZ927_RS24775 () | 5144588..5144953 | - | 366 | WP_013982123.1 | hypothetical protein | - |
| DZ927_RS24780 () | 5145043..5145654 | - | 612 | WP_010792165.1 | DUF3275 family protein | - |
| DZ927_RS24785 () | 5145710..5146261 | - | 552 | WP_010792166.1 | DUF3577 domain-containing protein | - |
| DZ927_RS24790 () | 5146605..5146970 | - | 366 | WP_029578154.1 | DUF3085 domain-containing protein | - |
| DZ927_RS24795 () | 5147036..5147833 | - | 798 | WP_013982120.1 | hypothetical protein | - |
| DZ927_RS24800 () | 5148124..5148840 | - | 717 | WP_013982119.1 | hypothetical protein | - |
| DZ927_RS24805 () | 5149091..5149483 | - | 393 | WP_003141051.1 | hypothetical protein | - |
| DZ927_RS24810 () | 5149509..5149745 | - | 237 | WP_013982118.1 | hypothetical protein | - |
| DZ927_RS24820 () | 5150528..5152543 | - | 2016 | WP_013982117.1 | DNA topoisomerase III | - |
| DZ927_RS24825 () | 5152838..5153221 | - | 384 | WP_004362284.1 | single-stranded DNA-binding protein | - |
| DZ927_RS24830 () | 5153218..5153766 | - | 549 | WP_031641644.1 | DUF3158 family protein | - |
| DZ927_RS24835 () | 5153763..5154542 | - | 780 | WP_013982115.1 | TIGR03761 family integrating conjugative element protein | - |
| DZ927_RS24840 () | 5154666..5154857 | - | 192 | WP_011805449.1 | hypothetical protein | - |
| DZ927_RS24845 () | 5154886..5155173 | - | 288 | WP_009618209.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DZ927_RS24850 () | 5155160..5155459 | - | 300 | WP_009618210.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DZ927_RS24855 () | 5155587..5156780 | - | 1194 | WP_013982114.1 | hypothetical protein | - |
| DZ927_RS24860 () | 5156783..5157343 | - | 561 | WP_013982113.1 | DUF2857 domain-containing protein | - |
| DZ927_RS24865 () | 5157361..5159019 | - | 1659 | WP_013982112.1 | ParB family protein | - |
| DZ927_RS24870 () | 5159012..5159248 | - | 237 | WP_013982111.1 | type II toxin-antitoxin system HicA family toxin | - |
| DZ927_RS24875 () | 5159232..5160098 | - | 867 | WP_013982110.1 | HTH-type transcriptional regulator RafR | VF |
| DZ927_RS24880 () | 5160139..5160357 | - | 219 | WP_023084999.1 | AlpA family transcriptional regulator | - |
| DZ927_RS24885 () | 5160499..5161257 | - | 759 | WP_003454930.1 | hypothetical protein | - |
| DZ927_RS24890 () | 5161797..5162705 | - | 909 | WP_012761385.1 | HTH-type transcriptional regulator HdfR | VF |
| DZ927_RS24895 () | 5162827..5162979 | + | 153 | WP_016852010.1 | IS66 family transposase ISPpu19 | Transposase |
| DZ927_RS35710 () | 5163022..5163198 | + | 177 | WP_016446187.1 | IS66 family transposase ISPpu19 | Transposase |
| DZ927_RS24900 () | 5163312..5163689 | - | 378 | WP_016446188.1 | IS110 family transposase IS5708 | Transposase |
| DZ927_RS24905 () | 5163974..5164246 | + | 273 | Protein_4812 | helix-turn-helix domain-containing protein | - |
| DZ927_RS24910 () | 5164291..5164860 | + | 570 | WP_016852012.1 | Formate dehydrogenase-O major subunit | VF |
| DZ927_RS24915 () | 5164955..5167804 | + | 2850 | WP_016852013.1 | Formate dehydrogenase-O iron-sulfur subunit | VF |
| DZ927_RS24920 () | 5167821..5169251 | + | 1431 | WP_023084997.1 | cardiolipin synthase | - |
| DZ927_RS24925 () | 5169279..5171096 | + | 1818 | WP_033949142.1 | Protein FdhE | VF |
| DZ927_RS24930 () | 5171184..5171642 | + | 459 | WP_019485494.1 | hypothetical protein | VF |
| DZ927_RS24935 () | 5171665..5172579 | + | 915 | WP_019485495.1 | heat resistance protein YfdX1 | - |
| DZ927_RS24940 () | 5172682..5173569 | + | 888 | WP_033949139.1 | heat resistance protein YfdX2 | - |
| DZ927_RS24945 () | 5173666..5174277 | + | 612 | WP_003285392.1 | heat resistance membrane protein HdeD-GI | - |
| DZ927_RS24950 () | 5174357..5175502 | + | 1146 | WP_033949134.1 | hypothetical protein | - |
| DZ927_RS24955 () | 5175492..5175932 | + | 441 | WP_012761376.1 | heat resistance system thioredoxin Trx-GI | - |
| DZ927_RS24960 () | 5175936..5177651 | + | 1716 | WP_003141082.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| DZ927_RS24965 () | 5177648..5178079 | + | 432 | WP_023084996.1 | phosphate-starvation-inducible PsiE family protein | - |
| DZ927_RS24970 () | 5178123..5179088 | + | 966 | WP_003141083.1 | M48 family metalloprotease | - |
| DZ927_RS24975 () | 5179113..5180264 | + | 1152 | WP_012761372.1 | Sensory histidine kinase/phosphatase NtrB | VF |
| DZ927_RS24980 () | 5180497..5181405 | + | 909 | WP_003141085.1 | LysR family transcriptional regulator | - |
| DZ927_RS24985 () | 5181714..5182061 | - | 348 | WP_019486378.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DZ927_RS24990 () | 5182071..5182322 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DZ927_RS24995 () | 5182536..5183519 | - | 984 | WP_003114154.1 | IS91 family transposase ISCARN110 | Transposase |
| DZ927_RS25000 () | 5183519..5184811 | - | 1293 | WP_003115206.1 | hypothetical protein | - |
| DZ927_RS25005 () | 5185070..5186332 | - | 1263 | WP_019486376.1 | hypothetical protein | VF |
| DZ927_RS25010 () | 5186334..5186684 | - | 351 | WP_003133726.1 | DUF2523 domain-containing protein | - |
| DZ927_RS25015 () | 5186694..5187644 | - | 951 | WP_019486375.1 | hypothetical protein | - |
| DZ927_RS25020 () | 5187961..5188179 | - | 219 | WP_003124953.1 | hypothetical protein | - |
| DZ927_RS25025 () | 5188193..5188444 | - | 252 | WP_003124954.1 | hypothetical protein | - |
| DZ927_RS25035 () | 5188565..5188999 | - | 435 | WP_003140508.1 | hypothetical protein | - |
| DZ927_RS25045 () | 5189514..5189804 | - | 291 | WP_031656982.1 | DUF5447 family protein | - |
| DZ927_RS35715 () | 5189808..5189966 | - | 159 | WP_019486373.1 | hypothetical protein | - |
| DZ927_RS25050 () | 5189978..5190193 | - | 216 | WP_016852068.1 | hypothetical protein | - |
| DZ927_RS25060 () | 5190648..5191346 | + | 699 | WP_023094177.1 | hypothetical protein | - |
| DZ927_RS25065 () | 5191365..5193125 | + | 1761 | WP_023094178.1 | AAA family ATPase | - |
| DZ927_RS25070 () | 5193501..5195348 | + | 1848 | WP_019486372.1 | hypothetical protein ; Integrase | Integrase |
| DZ927_RS25075 () | 5195410..5196009 | - | 600 | WP_025991881.1 | hypothetical protein | - |
| DZ927_RS25080 () | 5195979..5198711 | - | 2733 | WP_023094171.1 | hypothetical protein | - |
| DZ927_RS25085 () | 5198927..5199676 | - | 750 | WP_019486371.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| DZ927_RS25090 () | 5199673..5201832 | - | 2160 | WP_019486370.1 | type IV conjugative transfer system coupling protein TraD | - |
| DZ927_RS25095 () | 5201837..5202361 | - | 525 | WP_100247854.1 | integrating conjugative element protein | - |
| DZ927_RS25100 () | 5202364..5202951 | - | 588 | WP_019486368.1 | hypothetical protein | VF |
| DZ927_RS25105 () | 5202933..5203673 | - | 741 | WP_019486367.1 | TIGR03759 family integrating conjugative element protein | - |
| DZ927_RS25110 () | 5203688..5204350 | - | 663 | WP_019486366.1 | hypothetical protein | - |
| DZ927_RS25115 () | 5204347..5204931 | - | 585 | WP_019486365.1 | hypothetical protein | VF |
| DZ927_RS25120 () | 5205199..5206389 | + | 1191 | WP_019486364.1 | hypothetical protein | - |
| DZ927_RS25125 () | 5206392..5207576 | + | 1185 | WP_019486363.1 | hypothetical protein | - |
| DZ927_RS25130 () | 5207580..5209244 | + | 1665 | WP_019486362.1 | hypothetical protein | - |
| DZ927_RS25135 () | 5209313..5209978 | + | 666 | WP_019486361.1 | hypothetical protein | - |
| DZ927_RS25140 () | 5210056..5211153 | - | 1098 | WP_019486360.1 | hypothetical protein | - |
| DZ927_RS25145 () | 5211438..5212157 | - | 720 | WP_019486359.1 | hypothetical protein | - |
| DZ927_RS25150 () | 5212276..5213205 | - | 930 | Protein_4859 | SWF/SNF helicase family protein | - |
| DZ927_RS25155 () | 5213224..5213505 | + | 282 | WP_071534131.1 | hypothetical protein | - |
| DZ927_RS25160 () | 5213515..5215365 | - | 1851 | WP_019486356.1 | TraI domain-containing protein | - |
| DZ927_RS25165 () | 5215756..5217300 | + | 1545 | WP_019486355.1 | Fic family protein | - |
| DZ927_RS25170 () | 5217477..5217842 | + | 366 | WP_023094174.1 | DUF3742 family protein | - |
| DZ927_RS25175 () | 5217850..5218089 | - | 240 | Protein_4864 | conjugal transfer protein TraG | - |
| DZ927_RS25180 () | 5218155..5219317 | + | 1163 | WP_087920907.1 | IS3 family transposase IS222 | Transposase |
| DZ927_RS25185 () | 5219710..5220807 | - | 1098 | WP_019485085.1 | hypothetical protein | - |
| DZ927_RS25190 () | 5221141..5222094 | - | 954 | WP_019485086.1 | hypothetical protein | - |
| DZ927_RS25195 () | 5222697..5223173 | - | 477 | WP_003085438.1 | hypothetical protein | - |
| DZ927_RS25200 () | 5223405..5223698 | - | 294 | WP_003085435.1 | DUF2845 domain-containing protein | - |
| DZ927_RS25205 () | 5224038..5224295 | + | 258 | WP_003085431.1 | YjhX family toxin | - |
| DZ927_RS25210 () | 5224355..5224861 | + | 507 | WP_019485088.1 | N-acetyltransferase | - |
| DZ927_RS25215 () | 5224905..5225300 | - | 396 | WP_019485089.1 | lactoylglutathione lyase | - |
| DZ927_RS25220 () | 5225345..5225641 | - | 297 | WP_003085421.1 | antibiotic biosynthesis monooxygenase | - |
| DZ927_RS25225 () | 5225757..5226611 | + | 855 | WP_019485090.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|