MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 75380 bp
Accession: NZ_CP039222 Location: 1..75380 Organism: Piscirickettsia salmonis strain NVI 5692 Replicon: plasmid unnamed3
Accession: NZ_CP039222 Location: 1..75380 Organism: Piscirickettsia salmonis strain NVI 5692 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PsalN5692_RS19090 () | 1..990 | + | 990 | WP_155068949.1 | ParA family protein | - |
| PsalN5692_RS19095 () | 1001..1753 | + | 753 | WP_155068950.1 | winged helix-turn-helix transcriptional regulator | - |
| PsalN5692_RS19100 () | 2032..3090 | + | 1059 | WP_155068951.1 | hypothetical protein | - |
| PsalN5692_RS19105 () | 3187..3417 | + | 231 | WP_155068952.1 | hypothetical protein | - |
| PsalN5692_RS19110 () | 3679..4407 | - | 729 | WP_032126737.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19115 () | 4565..5293 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19120 () | 5340..5681 | - | 342 | WP_155068953.1 | hypothetical protein | - |
| PsalN5692_RS19125 () | 5769..6152 | - | 384 | WP_155068954.1 | HNH endonuclease | - |
| PsalN5692_RS19130 () | 6428..7876 | - | 1449 | WP_155068955.1 | hypothetical protein | - |
| PsalN5692_RS19135 () | 8007..8330 | - | 324 | Protein_9 | PIN domain-containing protein | - |
| PsalN5692_RS19140 () | 8398..9126 | + | 729 | WP_032126737.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19145 () | 10030..10596 | + | 567 | WP_155068956.1 | hypothetical protein | - |
| PsalN5692_RS19150 () | 11297..12271 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| PsalN5692_RS19155 () | 12589..12861 | + | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| PsalN5692_RS19160 () | 12873..13709 | + | 837 | WP_155066496.1 | IS3 family transposase IS1351 | Transposase |
| PsalN5692_RS19165 () | 13728..13931 | - | 204 | WP_155068957.1 | hypothetical protein | - |
| PsalN5692_RS19170 () | 14167..14601 | + | 435 | WP_155068958.1 | DUF4402 domain-containing protein | - |
| PsalN5692_RS19175 () | 14768..15232 | - | 465 | WP_155068959.1 | hypothetical protein | - |
| PsalN5692_RS19180 () | 15325..15792 | + | 468 | WP_155068960.1 | tryptophan-rich sensory protein | - |
| PsalN5692_RS19185 () | 15883..16611 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19190 () | 16614..17786 | - | 1173 | WP_155068961.1 | hypothetical protein | - |
| PsalN5692_RS19195 () | 17931..18332 | - | 402 | WP_155068962.1 | hypothetical protein | - |
| PsalN5692_RS19200 () | 18401..19129 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19205 () | 19152..21083 | + | 1932 | WP_155068963.1 | hypothetical protein | - |
| PsalN5692_RS19210 () | 21294..21587 | - | 294 | WP_155068964.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PsalN5692_RS19215 () | 21584..21907 | - | 324 | WP_155068965.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PsalN5692_RS19220 () | 22081..22809 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19225 () | 22911..23348 | + | 438 | WP_196215550.1 | IS3 family transposase ISSpu1 | Transposase |
| PsalN5692_RS19230 () | 23933..25285 | - | 1353 | WP_196215552.1 | DEAD/DEAH box helicase | - |
| PsalN5692_RS19235 () | 25375..25941 | - | 567 | WP_054300664.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| PsalN5692_RS19240 () | 25945..26631 | - | 687 | WP_017377658.1 | Fic family protein | - |
| PsalN5692_RS19245 () | 27000..27974 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| PsalN5692_RS19250 () | 28507..29235 | - | 729 | WP_032126737.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19255 () | 29326..29766 | - | 441 | WP_155068967.1 | hypothetical protein | - |
| PsalN5692_RS19260 () | 29813..30055 | - | 243 | WP_155068968.1 | hypothetical protein | - |
| PsalN5692_RS20945 () | 31347..31544 | + | 198 | WP_196215551.1 | hypothetical protein | - |
| PsalN5692_RS19270 () | 31563..32399 | - | 837 | WP_155047317.1 | IS3 family transposase IS1351 | Transposase |
| PsalN5692_RS19275 () | 32411..32683 | - | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| PsalN5692_RS19280 () | 32770..33063 | + | 294 | WP_155068969.1 | P27 family phage terminase small subunit | - |
| PsalN5692_RS19285 () | 33066..34748 | + | 1683 | WP_155068970.1 | terminase large subunit | - |
| PsalN5692_RS19290 () | 34839..35975 | + | 1137 | WP_155068971.1 | phage portal protein | - |
| PsalN5692_RS19295 () | 35923..36594 | + | 672 | WP_155068972.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| PsalN5692_RS19300 () | 36652..37635 | + | 984 | WP_155068973.1 | phage major capsid protein | - |
| PsalN5692_RS19305 () | 37691..37963 | + | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| PsalN5692_RS19310 () | 37975..38811 | + | 837 | WP_155047317.1 | IS3 family transposase IS1351 | Transposase |
| PsalN5692_RS19315 () | 38849..39079 | + | 231 | Protein_45 | phage major capsid protein | - |
| PsalN5692_RS19320 () | 39155..39379 | + | 225 | WP_155068974.1 | hypothetical protein | - |
| PsalN5692_RS19325 () | 39595..39906 | + | 312 | WP_155068975.1 | head-tail connector protein | - |
| PsalN5692_RS19330 () | 39903..40226 | + | 324 | WP_155068976.1 | phage head closure protein | - |
| PsalN5692_RS19335 () | 40219..40614 | + | 396 | WP_155068977.1 | HK97 gp10 family phage protein | - |
| PsalN5692_RS19340 () | 40611..40964 | + | 354 | WP_155068978.1 | hypothetical protein | - |
| PsalN5692_RS19345 () | 40961..41254 | + | 294 | Protein_51 | hypothetical protein | - |
| PsalN5692_RS19350 () | 41326..41598 | + | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| PsalN5692_RS19355 () | 41610..42446 | + | 837 | WP_155047317.1 | IS3 family transposase IS1351 | Transposase |
| PsalN5692_RS19360 () | 42724..44493 | + | 1770 | WP_155068979.1 | hypothetical protein | - |
| PsalN5692_RS20950 () | 44896..45051 | + | 156 | WP_196215542.1 | hypothetical protein | - |
| PsalN5692_RS19365 () | 45185..45595 | - | 411 | WP_155068980.1 | IS630 family transposase ISAcma25 | Transposase |
| PsalN5692_RS19370 () | 45604..45972 | - | 369 | WP_155068146.1 | IS630 family transposase ISTer1 | Transposase |
| PsalN5692_RS19375 () | 46114..46842 | + | 729 | WP_155068981.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19380 () | 47112..48236 | - | 1125 | WP_155068982.1 | hypothetical protein | - |
| PsalN5692_RS19385 () | 48642..48845 | + | 204 | WP_155068983.1 | transposase zinc-binding domain-containing protein | - |
| PsalN5692_RS19390 () | 48799..49056 | + | 258 | WP_196215543.1 | IS91 family transposase IS1294 | Transposase |
| PsalN5692_RS19395 () | 49086..49814 | + | 729 | WP_155068985.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19400 () | 50002..50691 | + | 690 | WP_064006370.1 | hypothetical protein | - |
| PsalN5692_RS19405 () | 50739..51554 | + | 816 | WP_155068986.1 | hypothetical protein | - |
| PsalN5692_RS19410 () | 51632..51865 | + | 234 | WP_131812062.1 | hypothetical protein | - |
| PsalN5692_RS19415 () | 51933..52319 | - | 387 | WP_016212195.1 | type II toxin-antitoxin system VapC family toxin | - |
| PsalN5692_RS19420 () | 52316..52561 | - | 246 | WP_016212196.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| PsalN5692_RS19425 () | 52760..53350 | + | 591 | WP_155068987.1 | site-specific integrase | - |
| PsalN5692_RS19430 () | 53786..54013 | + | 228 | Protein_69 | IS6 family transposase | - |
| PsalN5692_RS20955 () | 53959..54132 | + | 174 | WP_196215544.1 | hypothetical protein | - |
| PsalN5692_RS19435 () | 54302..54394 | + | 93 | Protein_71 | DDE-type integrase/transposase/recombinase | - |
| PsalN5692_RS19440 () | 54544..54744 | + | 201 | WP_155068988.1 | transposase zinc-binding domain-containing protein | - |
| PsalN5692_RS19445 () | 54781..55509 | + | 729 | WP_032126737.1 | IS6 family transposase ISPsa2 | Transposase |
| PsalN5692_RS19450 () | 55636..55911 | - | 276 | Protein_74 | DNA/RNA non-specific endonuclease | - |
| PsalN5692_RS19455 () | 55923..56330 | - | 408 | WP_155068989.1 | DUF4411 family protein | Toxin Detail |
| PsalN5692_RS19460 () | 56340..56567 | - | 228 | WP_016210972.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| PsalN5692_RS19465 () | 56715..57080 | - | 366 | WP_155069007.1 | hypothetical protein | - |
| PsalN5692_RS19470 () | 57222..57695 | - | 474 | WP_155068990.1 | single-stranded DNA-binding protein | - |
| PsalN5692_RS19475 () | 57834..58010 | + | 177 | WP_155068991.1 | IS3 family transposase ISSse3 | Transposase |
| PsalN5692_RS20960 () | 58114..58755 | + | 642 | WP_196215545.1 | IS91 family transposase ISVsa9 | Transposase |
| PsalN5692_RS20965 () | 58734..59240 | + | 507 | WP_196215553.1 | IS91 family transposase ISVsa21 | Transposase |
| PsalN5692_RS19485 () | 59393..59578 | + | 186 | WP_155068992.1 | IS3 family transposase ISWsu1 | Transposase |
| PsalN5692_RS19490 () | 59590..60345 | + | 756 | WP_155068993.1 | IS3 family transposase IS1351 | Transposase |
| PsalN5692_RS19495 () | 60416..61543 | - | 1128 | WP_155067589.1 | IS91 family transposase ISVsa21 | Transposase |
| PsalN5692_RS19500 () | 61609..61899 | + | 291 | WP_155068994.1 | integrase core domain-containing protein | - |
| PsalN5692_RS19505 () | 61918..62160 | - | 243 | WP_155068995.1 | hypothetical protein | - |
| PsalN5692_RS19510 () | 62157..62327 | - | 171 | WP_155068996.1 | hypothetical protein | - |
| PsalN5692_RS19515 () | 62539..62778 | - | 240 | WP_155068997.1 | hypothetical protein | - |
| PsalN5692_RS19520 () | 62775..63122 | - | 348 | WP_155069008.1 | hypothetical protein | - |
| PsalN5692_RS19525 () | 63115..63453 | - | 339 | WP_155068998.1 | hypothetical protein | - |
| PsalN5692_RS19530 () | 63585..64772 | - | 1188 | WP_155068999.1 | replication initiation protein | - |
| PsalN5692_RS19535 () | 64880..65146 | - | 267 | WP_155069000.1 | hypothetical protein | - |
| PsalN5692_RS19540 () | 65262..65564 | - | 303 | WP_155069001.1 | hypothetical protein | - |
| PsalN5692_RS19545 () | 65898..66143 | + | 246 | WP_196215546.1 | transposase zinc-binding domain-containing protein | - |
| PsalN5692_RS19550 () | 66146..66817 | + | 672 | WP_196215547.1 | IS91 family transposase ISVsa9 | Transposase |
| PsalN5692_RS20970 () | 67423..68991 | - | 1569 | WP_196215548.1 | hypothetical protein | - |
| PsalN5692_RS19560 () | 69141..70067 | + | 927 | WP_196215549.1 | IS91 family transposase ISVsa9 | Transposase |
| PsalN5692_RS19565 () | 70221..70622 | - | 402 | WP_155069003.1 | tyrosine-type recombinase/integrase | - |
| PsalN5692_RS19570 () | 70891..71145 | + | 255 | WP_155069004.1 | hypothetical protein | - |
| PsalN5692_RS19575 () | 71146..71445 | + | 300 | WP_155069005.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PsalN5692_RS19580 () | 71862..72989 | + | 1128 | WP_155067589.1 | IS91 family transposase ISVsa21 | Transposase |
| PsalN5692_RS19585 () | 73566..74693 | + | 1128 | WP_155067589.1 | IS91 family transposase ISVsa21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|