MGE detailed information
MGE type: Prophage MGE length: 120091 bp
Accession: NZ_CP038817 Location: 1959533..2079623 Organism: Haemophilus parahaemolyticus strain NEB129 Replicon: chromosome
Accession: NZ_CP038817 Location: 1959533..2079623 Organism: Haemophilus parahaemolyticus strain NEB129 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5Q53_RS09430 () | 1954877..1955743 | + | 867 | WP_005705670.1 | MurR/RpiR family transcriptional regulator | - |
| E5Q53_RS09435 () | 1955761..1956642 | + | 882 | WP_005705654.1 | N-acetylneuraminate lyase | - |
| E5Q53_RS09440 () | 1956790..1957602 | + | 813 | WP_005705710.1 | glucosamine-6-phosphate deaminase | - |
| E5Q53_RS09445 () | 1957726..1958871 | + | 1146 | WP_005705643.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| E5Q53_RS09450 () | 1958933..1959406 | + | 474 | WP_005705821.1 | YhcH/YjgK/YiaL family protein | - |
| E5Q53_RS09455 () | 1959533..1960462 | + | 930 | WP_005705717.1 | hypothetical protein ; Integrase | Integrase |
| E5Q53_RS09460 () | 1960517..1963534 | - | 3018 | WP_005705801.1 | type I restriction endonuclease subunit R | - |
| E5Q53_RS09465 () | 1963684..1964211 | - | 528 | WP_005705759.1 | restriction endonuclease subunit S | - |
| E5Q53_RS09470 () | 1964455..1965693 | - | 1239 | WP_078208083.1 | restriction endonuclease subunit S | - |
| E5Q53_RS09475 () | 1965949..1968477 | - | 2529 | WP_005705774.1 | type I restriction-modification system subunit M | - |
| E5Q53_RS09480 () | 1968830..1969717 | + | 888 | WP_005705852.1 | acetyl-CoA carboxylase, carboxyltransferase subunit beta | - |
| E5Q53_RS09485 () | 1969777..1971069 | + | 1293 | WP_005705677.1 | bifunctional tetrahydrofolate synthase/dihydrofolate synthase | - |
| E5Q53_RS09490 () | 1971103..1972014 | - | 912 | WP_005705745.1 | formate dehydrogenase accessory protein FdhE | - |
| E5Q53_RS09495 () | 1972083..1972763 | - | 681 | WP_005705615.1 | formate dehydrogenase subunit gamma | - |
| E5Q53_RS09500 () | 1972756..1973679 | - | 924 | WP_005705636.1 | formate dehydrogenase subunit beta | - |
| E5Q53_RS09505 () | 1973679..1976756 | - | 3078 | WP_078208068.1 | formate dehydrogenase-N subunit alpha | - |
| E5Q53_RS09510 () | 1977040..1977834 | + | 795 | WP_167499291.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| E5Q53_RS09515 () | 1977827..1981465 | - | 3639 | WP_005705733.1 | exodeoxyribonuclease V subunit beta | - |
| E5Q53_RS09520 () | 1981469..1982860 | - | 1392 | WP_005705792.1 | MATE family efflux transporter | - |
| E5Q53_RS09525 () | 1983070..1983612 | + | 543 | WP_078208069.1 | translation initiation factor IF-3 | - |
| E5Q53_RS09535 () | 1983902..1984099 | + | 198 | WP_005596065.1 | 50S ribosomal protein L35 | - |
| E5Q53_RS09540 () | 1984164..1984517 | + | 354 | WP_005596075.1 | 50S ribosomal protein L20 | - |
| E5Q53_RS09545 () | 1984576..1984845 | - | 270 | WP_005705736.1 | N-acetyltransferase | - |
| E5Q53_RS09550 () | 1984977..1986566 | + | 1590 | WP_005705752.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| E5Q53_RS09555 () | 1987031..1988779 | - | 1749 | WP_005705650.1 | hypothetical protein | VF |
| E5Q53_RS09560 () | 1988945..1989598 | + | 654 | WP_005705799.1 | uridine kinase | - |
| E5Q53_RS09565 () | 1989600..1990181 | + | 582 | WP_005705661.1 | dCTP deaminase | - |
| E5Q53_RS09570 () | 1990231..1991943 | - | 1713 | WP_005705797.1 | DUF3413 domain-containing protein | - |
| E5Q53_RS09575 () | 1991947..1992168 | - | 222 | WP_005705632.1 | DUF1414 domain-containing protein | - |
| E5Q53_RS09580 () | 1992374..1992925 | + | 552 | WP_050855301.1 | TetR/AcrR family transcriptional regulator | - |
| E5Q53_RS09585 () | 1992962..1994167 | + | 1206 | WP_005705609.1 | efflux RND transporter periplasmic adaptor subunit | - |
| E5Q53_RS09590 () | 1994180..1997299 | + | 3120 | WP_005705647.1 | hypothetical protein | VF |
| E5Q53_RS09595 () | 1997514..1998551 | + | 1038 | WP_005705854.1 | hypothetical protein | VF |
| E5Q53_RS09600 () | 1998541..1999218 | + | 678 | WP_005705603.1 | ABC transporter permease | - |
| E5Q53_RS09605 () | 1999260..2000090 | + | 831 | WP_005705823.1 | hypothetical protein | VF |
| E5Q53_RS09610 () | 2000181..2000984 | + | 804 | WP_005705722.1 | hypothetical protein | VF |
| E5Q53_RS09615 () | 2001092..2001613 | - | 522 | WP_005705750.1 | heme utilization protein HutZ | - |
| E5Q53_RS09620 () | 2001637..2002131 | - | 495 | WP_005705856.1 | hypothetical protein | VF |
| E5Q53_RS09625 () | 2002153..2003064 | - | 912 | WP_005705691.1 | transferrin-binding protein-like solute binding protein | - |
| E5Q53_RS09630 () | 2003208..2005490 | + | 2283 | WP_005705807.1 | hypothetical protein | VF |
| E5Q53_RS09635 () | 2005544..2007784 | - | 2241 | WP_005705668.1 | DNA topoisomerase IV subunit A | - |
| E5Q53_RS09640 () | 2008086..2010209 | + | 2124 | WP_005705697.1 | polyribonucleotide nucleotidyltransferase | - |
| E5Q53_RS09645 () | 2010312..2011244 | + | 933 | WP_005705616.1 | lipoprotein NlpI | - |
| E5Q53_RS09650 () | 2011423..2013222 | + | 1800 | WP_005705743.1 | DEAD/DEAH box helicase | - |
| E5Q53_RS09655 () | 2013301..2013834 | + | 534 | WP_005705828.1 | tRNA adenosine(34) deaminase TadA | - |
| E5Q53_RS09660 () | 2013836..2014651 | + | 816 | WP_005705791.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| E5Q53_RS09665 () | 2014961..2015170 | - | 210 | WP_005705596.1 | TOBE domain-containing protein | - |
| E5Q53_RS09670 () | 2015199..2015744 | - | 546 | WP_005705802.1 | single-stranded DNA-binding protein | - |
| E5Q53_RS09675 () | 2015893..2018721 | + | 2829 | WP_005705678.1 | hypothetical protein | VF |
| E5Q53_RS09680 () | 2018776..2019357 | - | 582 | WP_005705612.1 | thymidine kinase | - |
| E5Q53_RS09685 () | 2019422..2019640 | - | 219 | WP_005705723.1 | cell division protein ZapB | - |
| E5Q53_RS09690 () | 2019834..2020829 | + | 996 | WP_005705702.1 | class II fructose-bisphosphatase | - |
| E5Q53_RS09695 () | 2021022..2023007 | + | 1986 | WP_005705760.1 | iron ABC transporter permease | - |
| E5Q53_RS09700 () | 2023009..2024052 | + | 1044 | WP_005705795.1 | hypothetical protein | VF |
| E5Q53_RS09705 () | 2024102..2025151 | - | 1050 | WP_005705849.1 | ABC transporter substrate-binding protein | - |
| E5Q53_RS09710 () | 2025540..2026106 | - | 567 | WP_005705817.1 | elongation factor P | - |
| E5Q53_RS09715 () | 2026252..2026854 | + | 603 | WP_005705836.1 | hypothetical protein | - |
| E5Q53_RS09720 () | 2026914..2027921 | + | 1008 | WP_005705684.1 | EF-P beta-lysylation protein EpmB | - |
| E5Q53_RS09725 () | 2027939..2029405 | + | 1467 | WP_005705818.1 | replicative DNA helicase | - |
| E5Q53_RS09730 () | 2029407..2029715 | + | 309 | WP_005705719.1 | YcgL domain-containing protein | - |
| E5Q53_RS09735 () | 2029747..2031681 | + | 1935 | WP_005705826.1 | DNA topoisomerase III | - |
| E5Q53_RS09740 () | 2031787..2032116 | + | 330 | WP_005705740.1 | preprotein translocase subunit SecG | - |
| E5Q53_RS09750 () | 2032415..2033413 | + | 999 | WP_005705769.1 | hypothetical protein ; Integrase | Integrase |
| E5Q53_RS09755 () | 2033410..2033718 | - | 309 | WP_005705663.1 | hypothetical protein | - |
| E5Q53_RS09760 () | 2033764..2033958 | - | 195 | WP_039863003.1 | hypothetical protein | - |
| E5Q53_RS09765 () | 2033948..2034271 | - | 324 | WP_005705665.1 | hypothetical protein | - |
| E5Q53_RS09775 () | 2034626..2035468 | - | 843 | WP_005705653.1 | ORF6C domain-containing protein | - |
| E5Q53_RS09780 () | 2035781..2035990 | - | 210 | WP_039863001.1 | DUF551 domain-containing protein | - |
| E5Q53_RS09785 () | 2035987..2036883 | - | 897 | WP_039863000.1 | recombination-associated protein RdgC | - |
| E5Q53_RS09790 () | 2036801..2037262 | - | 462 | Protein_1871 | hypothetical protein | - |
| E5Q53_RS09795 () | 2037351..2037602 | - | 252 | WP_005705804.1 | hypothetical protein | - |
| E5Q53_RS09800 () | 2037751..2038137 | - | 387 | WP_005705824.1 | hypothetical protein | - |
| E5Q53_RS09805 () | 2038138..2038809 | - | 672 | WP_039862998.1 | translocation protein TolB precursor | - |
| E5Q53_RS09810 () | 2038781..2039722 | - | 942 | WP_005705620.1 | recombinase RecT | - |
| E5Q53_RS09815 () | 2039820..2040050 | - | 231 | WP_143413713.1 | hypothetical protein | - |
| E5Q53_RS10250 () | 2040294..2040440 | - | 147 | WP_005705718.1 | hypothetical protein | - |
| E5Q53_RS09820 () | 2040556..2041188 | - | 633 | WP_005705776.1 | hypothetical protein | - |
| E5Q53_RS09825 () | 2041541..2041975 | - | 435 | WP_005705659.1 | hypothetical protein | - |
| E5Q53_RS09830 () | 2041965..2042168 | - | 204 | WP_005705715.1 | hypothetical protein | - |
| E5Q53_RS09835 () | 2042265..2042459 | - | 195 | WP_005705822.1 | hypothetical protein | - |
| E5Q53_RS09840 () | 2043291..2043473 | - | 183 | WP_005705847.1 | hypothetical protein | - |
| E5Q53_RS09845 () | 2043717..2044313 | + | 597 | WP_005705756.1 | hypothetical protein | - |
| E5Q53_RS09850 () | 2044352..2045062 | - | 711 | WP_005705625.1 | Abi family protein | - |
| E5Q53_RS09855 () | 2045196..2045585 | - | 390 | WP_005705731.1 | hypothetical protein | - |
| E5Q53_RS09860 () | 2045595..2046251 | - | 657 | WP_005705604.1 | helix-turn-helix domain-containing protein | - |
| E5Q53_RS09865 () | 2046370..2046555 | + | 186 | WP_005705808.1 | Cro/Cl family transcriptional regulator | - |
| E5Q53_RS09870 () | 2046629..2047369 | + | 741 | WP_050855299.1 | Rha family transcriptional regulator | - |
| E5Q53_RS10315 () | 2047366..2047755 | + | 390 | Protein_1889 | helix-turn-helix domain-containing protein | - |
| E5Q53_RS09880 () | 2048142..2048984 | + | 843 | WP_005705766.1 | IS21 family transposase ISSme2 | Transposase |
| E5Q53_RS09885 () | 2048984..2049436 | + | 453 | WP_005705767.1 | DUF1367 family protein | - |
| E5Q53_RS09890 () | 2049465..2050097 | - | 633 | WP_005705858.1 | Bro-N domain-containing protein | - |
| E5Q53_RS09900 () | 2050399..2050722 | - | 324 | WP_100208016.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| E5Q53_RS09905 () | 2050738..2051043 | - | 306 | WP_005705597.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E5Q53_RS09910 () | 2051141..2051575 | - | 435 | WP_005705607.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| E5Q53_RS09915 () | 2051635..2051808 | - | 174 | WP_100208013.1 | mRNA interferase | - |
| E5Q53_RS10255 () | 2051909..2052073 | + | 165 | WP_005705635.1 | hypothetical protein | - |
| E5Q53_RS09920 () | 2052066..2052644 | + | 579 | WP_005705657.1 | recombination protein NinG | - |
| E5Q53_RS09925 () | 2052637..2053026 | + | 390 | WP_005705737.1 | hypothetical protein | - |
| E5Q53_RS09930 () | 2053159..2053413 | + | 255 | WP_039862994.1 | hypothetical protein | - |
| E5Q53_RS09935 () | 2053400..2053954 | + | 555 | WP_005705704.1 | lysozyme | - |
| E5Q53_RS09940 () | 2053927..2054268 | + | 342 | WP_005705840.1 | DUF2570 family protein | - |
| E5Q53_RS09950 () | 2054781..2055038 | - | 258 | WP_005705748.1 | hypothetical protein | - |
| E5Q53_RS09955 () | 2055040..2055276 | - | 237 | WP_039862992.1 | helix-turn-helix domain-containing protein | - |
| E5Q53_RS09960 () | 2055264..2055659 | - | 396 | WP_005705606.1 | hypothetical protein | - |
| E5Q53_RS09965 () | 2055803..2056234 | + | 432 | WP_005705763.1 | ASCH domain-containing protein | - |
| E5Q53_RS09970 () | 2056227..2056631 | + | 405 | WP_005705660.1 | hypothetical protein | - |
| E5Q53_RS09975 () | 2056591..2057862 | + | 1272 | WP_039862991.1 | PBSX family phage terminase large subunit | - |
| E5Q53_RS09980 () | 2057872..2059260 | + | 1389 | WP_005705700.1 | DUF4055 domain-containing protein | - |
| E5Q53_RS09985 () | 2059226..2060620 | + | 1395 | WP_005705860.1 | minor capsid protein | - |
| E5Q53_RS09990 () | 2060605..2060964 | + | 360 | WP_005705602.1 | hypothetical protein | - |
| E5Q53_RS09995 () | 2061015..2061266 | + | 252 | Protein_1912 | DUF2513 domain-containing protein | - |
| E5Q53_RS10000 () | 2061297..2061872 | + | 576 | WP_039863046.1 | hypothetical protein | - |
| E5Q53_RS10005 () | 2061872..2062090 | + | 219 | WP_005705827.1 | hypothetical protein | - |
| E5Q53_RS10010 () | 2062090..2062509 | + | 420 | WP_005705703.1 | hypothetical protein | VF |
| E5Q53_RS10015 () | 2062613..2063347 | + | 735 | WP_039863043.1 | hypothetical protein | - |
| E5Q53_RS10020 () | 2063413..2064363 | + | 951 | WP_005705714.1 | hypothetical protein | - |
| E5Q53_RS10260 () | 2064448..2064594 | + | 147 | WP_005705846.1 | hypothetical protein | - |
| E5Q53_RS10025 () | 2064609..2065046 | + | 438 | WP_005705789.1 | hypothetical protein | - |
| E5Q53_RS10030 () | 2065046..2065405 | + | 360 | WP_005705651.1 | hypothetical protein | - |
| E5Q53_RS10035 () | 2065398..2065794 | + | 397 | Protein_1921 | HK97 gp10 family phage protein | - |
| E5Q53_RS10040 () | 2065803..2066201 | + | 399 | WP_005705727.1 | hypothetical protein | - |
| E5Q53_RS10045 () | 2066204..2067217 | + | 1014 | WP_005705634.1 | hypothetical protein | - |
| E5Q53_RS10050 () | 2067271..2067672 | + | 402 | WP_005705631.1 | hypothetical protein | - |
| E5Q53_RS10055 () | 2067681..2068013 | + | 333 | WP_039862990.1 | hypothetical protein | - |
| E5Q53_RS10060 () | 2068013..2068339 | + | 327 | WP_005705626.1 | phage tail protein | - |
| E5Q53_RS10065 () | 2068336..2069049 | + | 714 | WP_005705787.1 | phage minor tail protein L | - |
| E5Q53_RS10070 () | 2069170..2069400 | + | 231 | WP_005705685.1 | hypothetical protein | - |
| E5Q53_RS10075 () | 2069401..2070159 | + | 759 | WP_005705809.1 | hypothetical protein | - |
| E5Q53_RS10080 () | 2070218..2070961 | + | 744 | WP_039863041.1 | C40 family peptidase | - |
| E5Q53_RS10085 () | 2070958..2071257 | - | 300 | WP_039863038.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| E5Q53_RS10090 () | 2071268..2071627 | - | 360 | WP_005705805.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E5Q53_RS10095 () | 2071716..2072282 | + | 567 | WP_005705652.1 | tail assembly protein | - |
| E5Q53_RS10100 () | 2072325..2072540 | - | 216 | WP_005705669.1 | BrnA antitoxin family protein | - |
| E5Q53_RS10105 () | 2072537..2072827 | - | 291 | WP_005705812.1 | BrnT family toxin | - |
| E5Q53_RS10110 () | 2072904..2073143 | + | 240 | Protein_1936 | hypothetical protein | - |
| E5Q53_RS10115 () | 2073180..2073938 | - | 759 | WP_078208072.1 | IS3 family transposase ISHar1 | Transposase |
| E5Q53_RS10120 () | 2074002..2074928 | + | 927 | WP_005706750.1 | hypothetical protein | - |
| E5Q53_RS10125 () | 2075153..2075866 | + | 714 | WP_005706757.1 | UMP kinase | - |
| E5Q53_RS10130 () | 2075912..2076469 | + | 558 | WP_005706753.1 | ribosome recycling factor | - |
| E5Q53_RS10135 () | 2076538..2077431 | + | 894 | WP_039863285.1 | cation diffusion facilitator family transporter | - |
| E5Q53_RS10140 () | 2077431..2078192 | + | 762 | WP_005706752.1 | Zn-ribbon-containing protein | - |
| E5Q53_RS10145 () | 2078314..2079141 | + | 828 | WP_005706755.1 | penicillin-insensitive murein endopeptidase | - |
| E5Q53_RS10150 () | 2079249..2079966 | - | 718 | Protein_1944 | IS3 family transposase ISApl2 | Transposase |
| E5Q53_RS10155 () | 2080054..2081718 | - | 1665 | WP_005706381.1 | PTS transporter subunit IIBC | - |
| E5Q53_RS10160 () | 2081728..2082519 | - | 792 | WP_005706374.1 | endonuclease/exonuclease/phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|