MGE detailed information
MGE type: Prophage MGE length: 46675 bp
Accession: NZ_CP038496 Location: 2947793..2994467 Organism: Escherichia coli O157:H7 strain TT12A Replicon: chromosome
Accession: NZ_CP038496 Location: 2947793..2994467 Organism: Escherichia coli O157:H7 strain TT12A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5F08_RS14405 () | 2942872..2943219 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| E5F08_RS14410 () | 2943269..2944807 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| E5F08_RS14415 () | 2945092..2945726 | + | 635 | Protein_2805 | transposase | - |
| E5F08_RS14420 () | 2945773..2946342 | - | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| E5F08_RS14425 () | 2946408..2947319 | - | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| E5F08_RS14430 () | 2947426..2947548 | - | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| E5F08_RS14435 () | 2947571..2948485 | + | 915 | Protein_2809 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E5F08_RS14440 () | 2949146..2950471 | + | 1326 | WP_001025672.1 | hypothetical protein | VF |
| E5F08_RS14445 () | 2950810..2951384 | - | 575 | Protein_2811 | hypothetical protein | VF |
| E5F08_RS14450 () | 2951497..2951766 | - | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| E5F08_RS14455 () | 2951768..2953081 | - | 1314 | WP_000216532.1 | ISNCY family transposase KIS | Transposase |
| E5F08_RS14460 () | 2953233..2953832 | - | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| E5F08_RS14465 () | 2953900..2956245 | - | 2346 | WP_115801855.1 | host specificity protein J | - |
| E5F08_RS14470 () | 2956197..2957372 | - | 1176 | WP_001304109.1 | host specificity protein J | - |
| E5F08_RS14475 () | 2957714..2958346 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| E5F08_RS14480 () | 2958292..2959035 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| E5F08_RS14485 () | 2959046..2959744 | - | 699 | WP_001179481.1 | phage minor tail protein L | - |
| E5F08_RS14490 () | 2959744..2960085 | - | 342 | WP_000807954.1 | phage tail protein | - |
| E5F08_RS14495 () | 2960078..2963320 | - | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| E5F08_RS14500 () | 2963368..2963577 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| E5F08_RS14505 () | 2963673..2964047 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| E5F08_RS14510 () | 2964062..2964778 | - | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| E5F08_RS14515 () | 2964844..2965188 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| E5F08_RS14520 () | 2965185..2965631 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| E5F08_RS14525 () | 2965628..2965978 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| E5F08_RS14530 () | 2965988..2966314 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| E5F08_RS14535 () | 2966317..2968896 | - | 2580 | WP_001304108.1 | phage portal protein | - |
| E5F08_RS14540 () | 2968842..2969063 | - | 222 | WP_001063094.1 | hypothetical protein | - |
| E5F08_RS14545 () | 2969108..2971045 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| E5F08_RS14550 () | 2971109..2972770 | - | 1662 | WP_001507810.1 | terminase large subunit | - |
| E5F08_RS14555 () | 2972767..2973330 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| E5F08_RS14560 () | 2973619..2973983 | - | 365 | Protein_2834 | HNH endonuclease | - |
| E5F08_RS14565 () | 2974025..2974252 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| E5F08_RS14570 () | 2974677..2974862 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| E5F08_RS14575 () | 2975090..2975236 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| E5F08_RS14580 () | 2975236..2975805 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| E5F08_RS14585 () | 2976076..2976609 | - | 534 | WP_000992137.1 | lysozyme | - |
| E5F08_RS14590 () | 2976660..2977004 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| E5F08_RS14595 () | 2977009..2977224 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| E5F08_RS14600 () | 2977664..2979514 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| E5F08_RS14605 () | 2979741..2979996 | - | 256 | Protein_2843 | DUF3927 family protein | - |
| E5F08_RS14610 () | 2979993..2980421 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| E5F08_RS14630 () | 2981062..2981751 | - | 690 | WP_001059381.1 | antiterminator | - |
| E5F08_RS14635 () | 2981748..2982107 | - | 360 | WP_137049460.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E5F08_RS14640 () | 2982120..2983169 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| E5F08_RS14645 () | 2983171..2983449 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| E5F08_RS14650 () | 2983617..2983772 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| E5F08_RS14655 () | 2984018..2984122 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| E5F08_RS14660 () | 2984238..2984822 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| E5F08_RS14665 () | 2984879..2985274 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| E5F08_RS14670 () | 2985290..2986059 | - | 770 | Protein_2853 | DUF1627 domain-containing protein | - |
| E5F08_RS14675 () | 2986085..2986825 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| E5F08_RS14680 () | 2986832..2987794 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| E5F08_RS14685 () | 2987817..2988242 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| E5F08_RS14690 () | 2988239..2988541 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| E5F08_RS14695 () | 2988639..2989010 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| E5F08_RS14700 () | 2989031..2989222 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| E5F08_RS14705 () | 2989224..2989502 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E5F08_RS14710 () | 2989855..2990154 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| E5F08_RS14715 () | 2990226..2990444 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| E5F08_RS14720 () | 2991013..2991201 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| E5F08_RS14725 () | 2991198..2991389 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| E5F08_RS14730 () | 2991482..2993953 | + | 2472 | WP_000048458.1 | exonuclease | - |
| E5F08_RS14735 () | 2994026..2994277 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| E5F08_RS14740 () | 2994312..2994496 | + | 185 | Protein_2867 | DUF3596 domain-containing protein | - |
| E5F08_RS14745 () | 2995266..2995592 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| E5F08_RS14750 () | 2995727..2996068 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| E5F08_RS14755 () | 2996103..2996663 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| E5F08_RS14760 () | 2996666..2997376 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| E5F08_RS14765 () | 2997484..2997789 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0 |