MGE detailed information
MGE type: Prophage MGE length: 56592 bp
Accession: NZ_CP038494 Location: 2836287..2892878 Organism: Escherichia coli O157:H7 strain TT12B Replicon: chromosome
Accession: NZ_CP038494 Location: 2836287..2892878 Organism: Escherichia coli O157:H7 strain TT12B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5F07_RS13635 () | 2831366..2831713 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| E5F07_RS13640 () | 2831763..2833301 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| E5F07_RS13645 () | 2833586..2834220 | + | 635 | Protein_2650 | transposase | - |
| E5F07_RS13650 () | 2834267..2834836 | - | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| E5F07_RS13655 () | 2834902..2835813 | - | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| E5F07_RS13660 () | 2835920..2836042 | - | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| E5F07_RS13665 () | 2836065..2836979 | + | 915 | Protein_2654 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E5F07_RS13670 () | 2837640..2838965 | + | 1326 | WP_001025672.1 | hypothetical protein | VF |
| E5F07_RS13675 () | 2839305..2839879 | - | 575 | Protein_2656 | hypothetical protein | VF |
| E5F07_RS13680 () | 2839992..2840261 | - | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| E5F07_RS13685 () | 2840263..2841576 | - | 1314 | WP_000216532.1 | ISNCY family transposase KIS | Transposase |
| E5F07_RS13690 () | 2841728..2842327 | - | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| E5F07_RS13695 () | 2842395..2844740 | - | 2346 | WP_115801855.1 | host specificity protein J | - |
| E5F07_RS13700 () | 2844692..2845867 | - | 1176 | WP_001304109.1 | host specificity protein J | - |
| E5F07_RS13705 () | 2846209..2846841 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| E5F07_RS13710 () | 2846787..2847530 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| E5F07_RS13715 () | 2847541..2848239 | - | 699 | WP_001179481.1 | phage minor tail protein L | - |
| E5F07_RS13720 () | 2848239..2848580 | - | 342 | WP_000807954.1 | phage tail protein | - |
| E5F07_RS13725 () | 2848573..2851815 | - | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| E5F07_RS13730 () | 2851863..2852072 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| E5F07_RS13735 () | 2852168..2852542 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| E5F07_RS13740 () | 2852557..2853273 | - | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| E5F07_RS13745 () | 2853339..2853683 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| E5F07_RS13750 () | 2853680..2854126 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| E5F07_RS13755 () | 2854123..2854473 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| E5F07_RS13760 () | 2854483..2854809 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| E5F07_RS13765 () | 2854812..2857390 | - | 2579 | Protein_2674 | phage portal protein | - |
| E5F07_RS13770 () | 2857336..2857557 | - | 222 | WP_001063094.1 | hypothetical protein | - |
| E5F07_RS13775 () | 2857602..2859539 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| E5F07_RS13780 () | 2859603..2861264 | - | 1662 | WP_001507810.1 | terminase large subunit | - |
| E5F07_RS13785 () | 2861261..2861824 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| E5F07_RS13790 () | 2862114..2862479 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| E5F07_RS13795 () | 2862521..2862748 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| E5F07_RS13800 () | 2863173..2863358 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| E5F07_RS13810 () | 2863586..2863732 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| E5F07_RS13815 () | 2863732..2864301 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| E5F07_RS13820 () | 2864572..2865105 | - | 534 | WP_000992137.1 | lysozyme | - |
| E5F07_RS13825 () | 2865156..2865500 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| E5F07_RS13830 () | 2865505..2865720 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| E5F07_RS13835 () | 2866160..2868010 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| E5F07_RS13840 () | 2868237..2868492 | - | 256 | Protein_2688 | DUF3927 family protein | - |
| E5F07_RS13845 () | 2868489..2868917 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| E5F07_RS13865 () | 2869558..2870247 | - | 690 | WP_001059381.1 | antiterminator | - |
| E5F07_RS13870 () | 2870244..2870603 | - | 360 | WP_137049460.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E5F07_RS13875 () | 2870616..2871665 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| E5F07_RS13880 () | 2871667..2871945 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| E5F07_RS13885 () | 2872113..2872325 | - | 213 | WP_000887477.1 | type I toxin-antitoxin system Hok family toxin | - |
| E5F07_RS13890 () | 2872514..2872618 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| E5F07_RS13895 () | 2872734..2873318 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| E5F07_RS13900 () | 2873375..2873770 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| E5F07_RS13905 () | 2873786..2874555 | - | 770 | Protein_2698 | DUF1627 domain-containing protein | - |
| E5F07_RS13910 () | 2874581..2875321 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| E5F07_RS13915 () | 2875328..2876290 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| E5F07_RS13920 () | 2876313..2876738 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| E5F07_RS13925 () | 2876735..2877037 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| E5F07_RS13930 () | 2877135..2877506 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| E5F07_RS13935 () | 2877527..2877718 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| E5F07_RS13940 () | 2877720..2877998 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E5F07_RS13945 () | 2878351..2878650 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| E5F07_RS13950 () | 2878722..2878940 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| E5F07_RS13960 () | 2879509..2879697 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| E5F07_RS13965 () | 2879694..2879885 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| E5F07_RS13970 () | 2879978..2882449 | + | 2472 | WP_000048458.1 | exonuclease | - |
| E5F07_RS13975 () | 2882522..2882773 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| E5F07_RS13980 () | 2882808..2882995 | + | 188 | Protein_2712 | DUF3596 domain-containing protein | - |
| E5F07_RS13990 () | 2883762..2884088 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| E5F07_RS13995 () | 2884223..2884564 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| E5F07_RS14000 () | 2884599..2885159 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| E5F07_RS14005 () | 2885162..2885872 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| E5F07_RS14010 () | 2885980..2886285 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| E5F07_RS14015 () | 2886484..2888910 | + | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| E5F07_RS14020 () | 2888971..2891394 | + | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| E5F07_RS14025 () | 2891405..2892022 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| E5F07_RS14030 () | 2892024..2892878 | + | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| E5F07_RS14035 () | 2892921..2893535 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| E5F07_RS14040 () | 2893693..2894985 | + | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| E5F07_RS14045 () | 2894938..2895633 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| E5F07_RS14050 () | 2895758..2896978 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.005 |