MGE detailed information
MGE type: Prophage MGE length: 56590 bp
Accession: NZ_CP038414 Location: 2507516..2564105 Organism: Escherichia coli O157:H7 strain 17B6-2 Replicon: chromosome
Accession: NZ_CP038414 Location: 2507516..2564105 Organism: Escherichia coli O157:H7 strain 17B6-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U86_RS12520 () | 2503416..2504636 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| E4U86_RS12525 () | 2504761..2505456 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| E4U86_RS12530 () | 2505409..2506701 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| E4U86_RS12535 () | 2506859..2507473 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| E4U86_RS12540 () | 2507516..2508370 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| E4U86_RS12545 () | 2508372..2508989 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| E4U86_RS12550 () | 2509000..2511423 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| E4U86_RS12555 () | 2511484..2513910 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| E4U86_RS12560 () | 2514109..2514414 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| E4U86_RS12565 () | 2514522..2515232 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| E4U86_RS12570 () | 2515235..2515795 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| E4U86_RS12575 () | 2515830..2516171 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| E4U86_RS12580 () | 2516306..2516632 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| E4U86_RS12585 () | 2517402..2517586 | - | 185 | Protein_2458 | DUF3596 domain-containing protein | - |
| E4U86_RS12590 () | 2517621..2517872 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| E4U86_RS12595 () | 2517945..2520416 | - | 2472 | WP_000048458.1 | exonuclease | - |
| E4U86_RS12600 () | 2520509..2520700 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| E4U86_RS12605 () | 2520697..2520885 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| E4U86_RS12610 () | 2521286..2521450 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| E4U86_RS12615 () | 2521454..2521672 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| E4U86_RS12620 () | 2521744..2522043 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| E4U86_RS12625 () | 2522396..2522674 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U86_RS12630 () | 2522676..2522867 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| E4U86_RS12635 () | 2522888..2523259 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| E4U86_RS12640 () | 2523357..2523659 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| E4U86_RS12645 () | 2523656..2524081 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| E4U86_RS12650 () | 2524104..2525066 | + | 963 | WP_000095668.1 | helix-turn-helix domain-containing protein | - |
| E4U86_RS12655 () | 2525073..2525813 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| E4U86_RS12660 () | 2525839..2526608 | + | 770 | Protein_2473 | DUF1627 domain-containing protein | - |
| E4U86_RS12665 () | 2526624..2527019 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| E4U86_RS12670 () | 2527076..2527659 | + | 584 | Protein_2475 | DUF551 domain-containing protein | - |
| E4U86_RS12675 () | 2527775..2527879 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| E4U86_RS12680 () | 2528068..2528280 | + | 213 | WP_000887477.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4U86_RS12685 () | 2528448..2528726 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| E4U86_RS12690 () | 2528728..2529777 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| E4U86_RS12695 () | 2529790..2530149 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E4U86_RS12700 () | 2530146..2530835 | + | 690 | WP_001059381.1 | antiterminator | - |
| E4U86_RS12720 () | 2531473..2531901 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| E4U86_RS12725 () | 2531898..2532153 | + | 256 | Protein_2483 | DUF3927 family protein | - |
| E4U86_RS12730 () | 2532380..2534230 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| E4U86_RS12735 () | 2534670..2534885 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| E4U86_RS12740 () | 2534890..2535234 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| E4U86_RS12745 () | 2535285..2535818 | + | 534 | WP_000992137.1 | lysozyme | - |
| E4U86_RS12750 () | 2536089..2536658 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| E4U86_RS12755 () | 2536658..2536804 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| E4U86_RS12760 () | 2536812..2537028 | + | 217 | Protein_2490 | endopeptidase | - |
| E4U86_RS12765 () | 2537032..2537217 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| E4U86_RS12770 () | 2537642..2537869 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| E4U86_RS12775 () | 2537911..2538276 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| E4U86_RS12780 () | 2538566..2539129 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| E4U86_RS12785 () | 2539126..2540787 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| E4U86_RS12790 () | 2540851..2542788 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| E4U86_RS12795 () | 2542833..2543054 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| E4U86_RS12800 () | 2543000..2545579 | + | 2580 | WP_000267295.1 | phage portal protein | - |
| E4U86_RS12805 () | 2545582..2545908 | + | 327 | WP_000126003.1 | head-tail connector protein | - |
| E4U86_RS12810 () | 2545918..2546268 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| E4U86_RS12815 () | 2546265..2546711 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| E4U86_RS12820 () | 2546708..2547052 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| E4U86_RS12825 () | 2547118..2547834 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| E4U86_RS12830 () | 2547849..2548223 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| E4U86_RS12835 () | 2548319..2548528 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| E4U86_RS12840 () | 2548576..2551818 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| E4U86_RS12845 () | 2551811..2552152 | + | 342 | WP_000807954.1 | phage tail protein | - |
| E4U86_RS12850 () | 2552152..2552850 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| E4U86_RS12855 () | 2552861..2553604 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| E4U86_RS12860 () | 2553550..2554182 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| E4U86_RS12865 () | 2554525..2555700 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| E4U86_RS12870 () | 2555652..2557997 | + | 2346 | WP_137325071.1 | host specificity protein J | - |
| E4U86_RS12875 () | 2558065..2558664 | + | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| E4U86_RS12880 () | 2558816..2560129 | + | 1314 | WP_000216532.1 | ISNCY family transposase KIS | Transposase |
| E4U86_RS12885 () | 2560131..2560400 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| E4U86_RS12890 () | 2560513..2561087 | + | 575 | Protein_2516 | hypothetical protein | VF |
| E4U86_RS12895 () | 2561427..2562752 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| E4U86_RS12900 () | 2563413..2564327 | - | 915 | Protein_2518 | hypothetical protein ; Integrase | Integrase |
| E4U86_RS12905 () | 2564350..2564472 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| E4U86_RS12910 () | 2564579..2565490 | + | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| E4U86_RS12915 () | 2565556..2566124 | + | 569 | Protein_2521 | T3SS effector caspase inhibitor NleF | - |
| E4U86_RS12920 () | 2566171..2566805 | - | 635 | Protein_2522 | transposase | - |
| E4U86_RS12925 () | 2567090..2568628 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| E4U86_RS12930 () | 2568678..2569025 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.007 |