MGE detailed information
MGE type: Prophage MGE length: 49992 bp
Accession: NZ_CP038408 Location: 3026838..3076829 Organism: Escherichia coli O157:H7 strain 86-24 Replicon: chromosome
Accession: NZ_CP038408 Location: 3026838..3076829 Organism: Escherichia coli O157:H7 strain 86-24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3169_RS15305 () | 3021917..3022264 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| E3169_RS15310 () | 3022314..3023852 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| E3169_RS15315 () | 3024137..3024771 | + | 635 | Protein_3000 | transposase | - |
| E3169_RS15320 () | 3024818..3025387 | - | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| E3169_RS15325 () | 3025453..3026364 | - | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| E3169_RS15330 () | 3026471..3026593 | - | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| E3169_RS15335 () | 3026616..3027530 | + | 915 | Protein_3004 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E3169_RS15340 () | 3028191..3029516 | + | 1326 | WP_001025672.1 | hypothetical protein | VF |
| E3169_RS15345 () | 3029856..3030430 | - | 575 | Protein_3006 | hypothetical protein | VF |
| E3169_RS15350 () | 3030543..3030812 | - | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| E3169_RS15355 () | 3030814..3032127 | - | 1314 | WP_000216532.1 | ISNCY family transposase KIS | Transposase |
| E3169_RS15360 () | 3032279..3032878 | - | 600 | WP_001228304.1 | hypothetical protein | VF |
| E3169_RS15365 () | 3032946..3035291 | - | 2346 | WP_115801855.1 | host specificity protein J | - |
| E3169_RS15370 () | 3035243..3036418 | - | 1176 | WP_001304109.1 | host specificity protein J | - |
| E3169_RS15375 () | 3036761..3037393 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| E3169_RS15380 () | 3037339..3038082 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| E3169_RS15385 () | 3038093..3038791 | - | 699 | WP_001179481.1 | phage minor tail protein L | - |
| E3169_RS15390 () | 3038791..3039132 | - | 342 | WP_000807954.1 | phage tail protein | - |
| E3169_RS15395 () | 3039125..3042367 | - | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| E3169_RS15400 () | 3042415..3042624 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| E3169_RS15405 () | 3042720..3043094 | - | 375 | WP_001030060.1 | phage tail assembly chaperone | - |
| E3169_RS15410 () | 3043100..3043816 | - | 717 | WP_001275479.1 | immunoglobulin domain-containing protein | - |
| E3169_RS15415 () | 3043885..3044229 | - | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| E3169_RS15420 () | 3044226..3044672 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| E3169_RS15425 () | 3044669..3045019 | - | 351 | WP_001007911.1 | phage head closure protein | - |
| E3169_RS15430 () | 3045029..3045355 | - | 327 | WP_000125984.1 | head-tail connector protein | - |
| E3169_RS15435 () | 3045352..3047936 | - | 2585 | Protein_3024 | phage portal protein | - |
| E3169_RS15440 () | 3047882..3048103 | - | 222 | WP_001063025.1 | hypothetical protein | - |
| E3169_RS15445 () | 3048148..3050085 | - | 1938 | WP_000173036.1 | phage major capsid protein | - |
| E3169_RS15450 () | 3050149..3051810 | - | 1662 | WP_001301491.1 | terminase large subunit | - |
| E3169_RS15455 () | 3051807..3052370 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| E3169_RS15460 () | 3052660..3053025 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| E3169_RS15465 () | 3053067..3053294 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| E3169_RS15470 () | 3053719..3053904 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| E3169_RS15475 () | 3053908..3054124 | - | 217 | Protein_3032 | endopeptidase | - |
| E3169_RS15480 () | 3054132..3054278 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| E3169_RS15485 () | 3054278..3054847 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| E3169_RS15490 () | 3055118..3055651 | - | 534 | WP_000992137.1 | lysozyme | - |
| E3169_RS15495 () | 3055702..3056046 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| E3169_RS15500 () | 3056051..3056266 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| E3169_RS15505 () | 3056706..3058556 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| E3169_RS15510 () | 3058783..3059038 | - | 256 | Protein_3039 | DUF3927 family protein | - |
| E3169_RS15515 () | 3059035..3059463 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| E3169_RS15535 () | 3060102..3060791 | - | 690 | WP_001059381.1 | antiterminator | - |
| E3169_RS15540 () | 3060788..3061147 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E3169_RS15545 () | 3061160..3062209 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| E3169_RS15550 () | 3062211..3062489 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| E3169_RS15555 () | 3062657..3062869 | - | 213 | WP_000887477.1 | type I toxin-antitoxin system Hok family toxin | - |
| E3169_RS15560 () | 3063058..3063162 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| E3169_RS15565 () | 3063278..3063862 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| E3169_RS15570 () | 3063919..3064314 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| E3169_RS15575 () | 3064330..3065099 | - | 770 | Protein_3049 | DUF1627 domain-containing protein | - |
| E3169_RS15580 () | 3065125..3065865 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| E3169_RS15585 () | 3065872..3066834 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| E3169_RS15590 () | 3066857..3067282 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| E3169_RS15595 () | 3067279..3067581 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| E3169_RS15600 () | 3067679..3068050 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| E3169_RS15605 () | 3068071..3068262 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| E3169_RS15610 () | 3068264..3068542 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3169_RS15615 () | 3068895..3069194 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| E3169_RS15620 () | 3069266..3069484 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| E3169_RS15625 () | 3069488..3069652 | - | 165 | WP_001331716.1 | hypothetical protein | - |
| E3169_RS15630 () | 3070053..3070241 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| E3169_RS15635 () | 3070238..3070429 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| E3169_RS15640 () | 3070522..3072993 | + | 2472 | WP_000048458.1 | exonuclease | - |
| E3169_RS15645 () | 3073066..3073317 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| E3169_RS15650 () | 3073352..3073539 | + | 188 | Protein_3064 | DUF3596 domain-containing protein | - |
| E3169_RS15655 () | 3074306..3074632 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| E3169_RS15660 () | 3074767..3075108 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| E3169_RS15665 () | 3075143..3075703 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| E3169_RS15670 () | 3075706..3076416 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| E3169_RS15675 () | 3076524..3076829 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| E3169_RS15680 () | 3077028..3079454 | + | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.004 |