MGE detailed information
MGE type: Mobilizable plasmid MGE length: 57827 bp
Accession: NZ_CP038388 Location: 1..57827 Organism: Escherichia coli O157:H7 strain DEC5D Replicon: plasmid pDEC5D-3
Accession: NZ_CP038388 Location: 1..57827 Organism: Escherichia coli O157:H7 strain DEC5D Replicon: plasmid pDEC5D-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3157_RS24980 () | 757..1140 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| E3157_RS24985 () | 1473..2063 | + | 591 | WP_013009334.1 | hypothetical protein | VF |
| E3157_RS24990 () | 2184..3524 | - | 1341 | Protein_3 | IS4 family transposase ISCro3 | Transposase |
| E3157_RS24995 () | 3803..4624 | - | 822 | WP_001234472.1 | DUF945 domain-containing protein | - |
| E3157_RS25000 () | 4743..5030 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| E3157_RS25005 () | 5055..5261 | - | 207 | WP_000275846.1 | hypothetical protein | - |
| E3157_RS25010 () | 5309..5677 | - | 369 | WP_049806405.1 | hypothetical protein | - |
| E3157_RS25015 () | 5760..5951 | - | 192 | WP_001024835.1 | hypothetical protein | - |
| E3157_RS25020 () | 5948..6370 | - | 423 | WP_000271758.1 | DUF1380 family protein | - |
| E3157_RS25025 () | 6417..6695 | - | 279 | WP_072131700.1 | antirestriction protein | - |
| E3157_RS25030 () | 6791..7362 | - | 572 | Protein_11 | YubH family protein | - |
| E3157_RS25035 () | 7786..8011 | - | 226 | Protein_12 | hypothetical protein | - |
| E3157_RS25040 () | 8057..8491 | - | 435 | WP_000274489.1 | DUF1380 family protein | - |
| E3157_RS25045 () | 8503..8724 | - | 222 | WP_001104880.1 | hypothetical protein | - |
| E3157_RS25050 () | 8725..9408 | - | 684 | WP_000085942.1 | DNA methylase | - |
| E3157_RS25055 () | 9485..9790 | - | 306 | WP_032163448.1 | hypothetical protein | - |
| E3157_RS25060 () | 9794..10210 | - | 417 | Protein_17 | DUF1281 domain-containing protein | - |
| E3157_RS25065 () | 10241..11252 | + | 1012 | Protein_18 | DUF4113 domain-containing protein | - |
| E3157_RS25070 () | 11393..12355 | - | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| E3157_RS25075 () | 12352..13557 | - | 1206 | WP_000817637.1 | Plasmid partition protein A | VF |
| E3157_RS25080 () | 13946..14197 | + | 252 | WP_001132893.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| E3157_RS25085 () | 14194..14481 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3157_RS25090 () | 14483..14888 | + | 406 | Protein_23 | DDE-type integrase/transposase/recombinase | - |
| E3157_RS25095 () | 15534..16511 | + | 978 | WP_000361616.1 | RepB family plasmid replication initiator protein | - |
| E3157_RS25100 () | 16795..17535 | - | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| E3157_RS25105 () | 17659..17799 | - | 141 | Protein_26 | serine/threonine protein kinase | - |
| E3157_RS25110 () | 17850..18011 | + | 162 | Protein_27 | epoxyqueuosine reductase QueH | - |
| E3157_RS25115 () | 18322..18696 | - | 375 | WP_001368887.1 | hypothetical protein | - |
| E3157_RS25120 () | 18899..19078 | + | 180 | WP_000526857.1 | hypothetical protein | - |
| E3157_RS25125 () | 19327..19764 | + | 438 | WP_000273581.1 | hypothetical protein | - |
| E3157_RS25130 () | 19867..21080 | + | 1214 | WP_165382802.1 | IS3 family transposase IS629 | Transposase |
| E3157_RS25135 () | 21635..21918 | - | 284 | Protein_32 | YkgJ family cysteine cluster protein | - |
| E3157_RS25140 () | 22067..23392 | - | 1326 | WP_001025657.1 | hypothetical protein | VF |
| E3157_RS25145 () | 24105..24769 | - | 665 | Protein_34 | tyrosine-type recombinase/integrase | - |
| E3157_RS25155 () | 26230..26910 | - | 681 | Protein_36 | IS21 family transposase IS100kyp | Transposase |
| E3157_RS25160 () | 26996..27703 | - | 708 | Protein_37 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| E3157_RS25165 () | 27684..28124 | - | 441 | WP_072141484.1 | recombinase family protein | - |
| E3157_RS25170 () | 28206..29744 | - | 1539 | WP_000099187.1 | IS66 family transposase ISEc22 | Transposase |
| E3157_RS25175 () | 29793..30140 | - | 348 | WP_000612550.1 | IS66 family transposase ISKpn24 | Transposase |
| E3157_RS25180 () | 30137..30541 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| E3157_RS25185 () | 30619..33597 | - | 2979 | WP_000124031.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| E3157_RS25190 () | 33752..34393 | + | 642 | WP_000470626.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| E3157_RS25195 () | 34513..35103 | + | 591 | WP_000194567.1 | hypothetical protein | - |
| E3157_RS25200 () | 35121..35468 | - | 348 | WP_000142440.1 | hypothetical protein | - |
| E3157_RS25205 () | 35597..35932 | + | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| E3157_RS25210 () | 35954..37834 | - | 1881 | WP_001283342.1 | colicin 1A | - |
| E3157_RS25215 () | 38113..39459 | - | 1347 | WP_001132032.1 | hypothetical protein | - |
| E3157_RS25220 () | 39813..40355 | + | 543 | Protein_49 | proQ/FINO family protein | - |
| E3157_RS25225 () | 40408..41049 | - | 642 | WP_000470626.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| E3157_RS25230 () | 41204..44182 | + | 2979 | WP_000124031.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| E3157_RS25235 () | 44260..44664 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| E3157_RS25240 () | 44661..45008 | + | 348 | WP_000612550.1 | IS66 family transposase ISKpn24 | Transposase |
| E3157_RS25245 () | 45057..46595 | + | 1539 | WP_000099187.1 | IS66 family transposase ISEc22 | Transposase |
| E3157_RS25250 () | 47010..47597 | - | 588 | WP_001418189.1 | serine acetyltransferase | - |
| E3157_RS25255 () | 47897..48238 | + | 342 | WP_000578011.1 | hypothetical protein | - |
| E3157_RS25260 () | 48434..48715 | - | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3157_RS25265 () | 48712..48981 | - | 270 | WP_000079946.1 | hypothetical protein | Antitoxin Detail |
| E3157_RS25270 () | 49036..49194 | - | 159 | WP_000829588.1 | hypothetical protein | - |
| E3157_RS25275 () | 49896..50003 | - | 108 | Protein_60 | incFII family plasmid replication initiator RepA | - |
| E3157_RS25280 () | 50026..50274 | - | 249 | WP_000083841.1 | replication regulatory protein RepA | - |
| E3157_RS25285 () | 50503..50796 | - | 294 | Protein_62 | hypothetical protein | - |
| E3157_RS25290 () | 51095..51310 | - | 216 | Protein_63 | IS3 family transposase IS1203 | Transposase |
| E3157_RS25295 () | 51385..51786 | - | 402 | WP_001222321.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3157_RS25300 () | 51880..52713 | - | 834 | WP_000088803.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E3157_RS25305 () | 52833..54046 | + | 1214 | WP_085959019.1 | IS3 family transposase ISEc31 | Transposase |
| E3157_RS25310 () | 54178..54639 | - | 462 | WP_077630452.1 | conjugal transfer protein TraI | - |
| E3157_RS25315 () | 54639..55385 | - | 747 | Protein_68 | conjugative transfer relaxase/helicase TraI | - |
| E3157_RS25320 () | 55416..55916 | - | 501 | Protein_69 | type-F conjugative transfer system secretin TraK | - |
| E3157_RS25325 () | 55903..56469 | - | 567 | WP_000399770.1 | type IV conjugative transfer system protein TraE | - |
| E3157_RS25330 () | 56491..56802 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| E3157_RS25335 () | 56817..57181 | - | 365 | Protein_72 | type IV conjugative transfer system pilin TraA | - |
| E3157_RS25340 () | 57214..57609 | - | 396 | WP_013009335.1 | conjugal transfer relaxosome protein TraY | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|