MGE detailed information

MGE type: Prophage        MGE length: 166346 bp
Accession: NZ_CP038376        Location: 2473760..2640105         Organism: Escherichia coli O157:H7 strain F1273       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E3159_RS12005 () 2469627..2469800 + 174 WP_001309467.1 YciY family protein -
E3159_RS12010 () 2469855..2471108 - 1254 WP_000020078.1 voltage-gated potassium channel protein -
E3159_RS12015 () 2471409..2471705 - 297 WP_000967595.1 YciI family protein -
E3159_RS12020 () 2471929..2472648 + 720 WP_001302286.1 TonB system transport protein TonB -
E3159_RS12025 () 2472688..2473086 - 399 WP_000108158.1 acyl-CoA thioester hydrolase YciA -
E3159_RS12030 () 2473191..2473730 - 540 WP_000808667.1 septation protein A -
E3159_RS12035 () 2473760..2474503 - 744 WP_000028544.1 envelope biogenesis factor ElyC -
E3159_RS12040 () 2474531..2474620 - 90 Protein_2337 YkgJ family cysteine cluster protein -
E3159_RS12045 () 2474860..2475498 + 639 WP_000737224.1 outer membrane protein OmpW -
E3159_RS12050 () 2475544..2476674 - 1131 WP_000113674.1 hypothetical protein ; Integrase Integrase
E3159_RS12055 () 2476652..2476900 - 249 WP_000113189.1 excisionase -
E3159_RS12060 () 2476965..2479436 - 2472 WP_000048549.1 exonuclease -
E3159_RS12065 () 2479529..2479720 - 192 WP_001090200.1 DUF1482 family protein -
E3159_RS12070 () 2479717..2479905 - 189 WP_000449192.1 cell division inhibition protein DicB -
E3159_RS12075 () 2480303..2480470 + 168 WP_001356681.1 hypothetical protein -
E3159_RS12080 () 2480464..2480697 + 234 WP_000920491.1 hypothetical protein -
E3159_RS12085 () 2480675..2481082 - 408 WP_000394552.1 hypothetical protein -
E3159_RS12090 () 2481105..2481323 - 219 WP_001171903.1 hypothetical protein -
E3159_RS12095 () 2481396..2481695 - 300 WP_001240336.1 hypothetical protein -
E3159_RS12100 () 2481959..2482366 - 408 WP_000787428.1 helix-turn-helix domain-containing protein -
E3159_RS12105 () 2482443..2482670 + 228 WP_000912298.1 transcriptional regulator -
E3159_RS12110 () 2482654..2483205 + 552 WP_000705621.1 hypothetical protein -
E3159_RS12115 () 2483177..2484217 + 1041 WP_000020556.1 DNA-binding protein -
E3159_RS12120 () 2484129..2484671 + 543 WP_157825328.1 replication protein -
E3159_RS12125 () 2484858..2485439 + 582 WP_000774808.1 DUF1627 domain-containing protein -
E3159_RS12130 () 2485436..2485600 + 165 WP_001505071.1 hypothetical protein -
E3159_RS12135 () 2486299..2487057 + 759 WP_001449026.1 hypothetical protein VF
E3159_RS12140 () 2487336..2487548 + 213 WP_000961820.1 type I toxin-antitoxin system Hok family toxin -
E3159_RS12145 () 2487769..2488026 + 258 WP_001217394.1 hypothetical protein -
E3159_RS12150 () 2488096..2488374 + 279 WP_010917803.1 hypothetical protein -
E3159_RS12155 () 2488376..2489422 + 1047 WP_001302148.1 DUF968 domain-containing protein -
E3159_RS12160 () 2489435..2489794 + 360 WP_000904166.1 RusA family crossover junction endodeoxyribonuclease -
E3159_RS12165 () 2489803..2490333 + 531 WP_000640048.1 DUF1133 family protein -
E3159_RS12170 () 2490575..2490772 + 198 WP_000917750.1 hypothetical protein -
E3159_RS12175 () 2490923..2491981 + 1059 WP_000935548.1 site-specific DNA-methyltransferase -
E3159_RS12190 () 2492778..2494631 + 1854 WP_000143067.1 DUF1737 domain-containing protein -
E3159_RS12195 () 2494781..2494996 + 216 WP_000284517.1 class II holin family protein -
E3159_RS12200 () 2495001..2495345 + 345 WP_000731259.1 YdfR family protein -
E3159_RS12205 () 2495396..2495929 + 534 WP_000992137.1 lysozyme -
E3159_RS12210 () 2496200..2496769 + 570 WP_001056806.1 hypothetical protein -
E3159_RS12215 () 2496769..2496915 + 147 WP_000539792.1 hypothetical protein -
E3159_RS12220 () 2496923..2497139 + 217 Protein_2371 endopeptidase -
E3159_RS12225 () 2497143..2497328 + 186 WP_012816791.1 Rz1 family lipoprotein -
E3159_RS12230 () 2497753..2497980 - 228 WP_000095736.1 DUF3950 domain-containing protein -
E3159_RS12235 () 2498022..2498387 + 366 WP_015994246.1 HNH endonuclease -
E3159_RS12240 () 2498677..2499240 + 564 WP_001303051.1 terminase small subunit -
E3159_RS12245 () 2499237..2500898 + 1662 WP_001303049.1 terminase large subunit -
E3159_RS12250 () 2500962..2502899 + 1938 WP_000172999.1 phage major capsid protein -
E3159_RS12255 () 2502944..2503165 + 222 WP_001063099.1 hypothetical protein -
E3159_RS12260 () 2503111..2505612 + 2502 WP_000267292.1 phage portal protein -
E3159_RS12265 () 2505692..2506018 + 327 WP_000126019.1 head-tail connector protein -
E3159_RS12270 () 2506028..2506378 + 351 WP_001007901.1 phage head closure protein -
E3159_RS12275 () 2506375..2506821 + 447 WP_171877933.1 HK97 gp10 family phage protein -
E3159_RS12280 () 2506818..2507162 + 345 WP_000133388.1 DUF3168 domain-containing protein -
E3159_RS12285 () 2507221..2507937 + 717 WP_001275508.1 tail protein -
E3159_RS12290 () 2507943..2508317 + 375 WP_001030063.1 phage tail assembly chaperone -
E3159_RS12295 () 2508413..2508622 + 210 WP_001453698.1 DUF4035 domain-containing protein -
E3159_RS12300 () 2508675..2511917 + 3243 WP_064261924.1 phage tail tape measure protein -
E3159_RS12305 () 2511910..2512251 + 342 WP_000807954.1 phage tail protein -
E3159_RS12310 () 2512251..2512949 + 699 WP_001303038.1 phage minor tail protein L -
E3159_RS12315 () 2512960..2513703 + 744 WP_046671488.1 C40 family peptidase -
E3159_RS12320 () 2513649..2514281 + 633 WP_050439450.1 tail assembly protein -
E3159_RS12325 () 2514624..2515799 + 1176 WP_001304109.1 host specificity protein J -
E3159_RS12330 () 2515751..2516011 + 261 WP_128484559.1 hypothetical protein -
E3159_RS12340 () 2517283..2519409 + 2127 Protein_2395 host specificity protein J -
E3159_RS12345 () 2519477..2520076 + 600 WP_001228304.1 hypothetical protein VF
E3159_RS12350 () 2520228..2521541 + 1314 WP_024748516.1 ISNCY family transposase KIS Transposase
E3159_RS12355 () 2521543..2521812 + 270 WP_001023474.1 phage tail fiber C-terminal domain-containing protein -
E3159_RS12360 () 2521925..2522499 + 575 Protein_2399 hypothetical protein VF
E3159_RS12365 () 2522839..2524164 - 1326 WP_001025672.1 hypothetical protein VF
E3159_RS12370 () 2524825..2525739 - 915 Protein_2401 Tyrosine recombinase XerD ; Integrase Integrase
E3159_RS12375 () 2525753..2525863 + 111 Protein_2402 type III effector -
E3159_RS12380 () 2525910..2526544 - 635 Protein_2403 IS256 family transposase ISEic2 Transposase
E3159_RS12385 () 2526829..2528367 - 1539 WP_000998048.1 IS66 family transposase ISEc8 Transposase
E3159_RS12390 () 2528417..2528764 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
E3159_RS12395 () 2528761..2529141 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
E3159_RS12400 () 2529481..2529759 - 279 WP_001303943.1 hypothetical protein -
E3159_RS12405 () 2530187..2530333 + 147 WP_001414184.1 hypothetical protein -
E3159_RS12410 () 2530470..2531117 - 648 WP_001303944.1 hypothetical protein VF
E3159_RS12415 () 2531301..2531891 + 591 WP_001144877.1 hypothetical protein VF
E3159_RS12420 () 2532110..2533166 - 1057 Protein_2411 IS630 family transposase -
E3159_RS12425 () 2533398..2534048 + 651 WP_001345079.1 hypothetical protein VF
E3159_RS12430 () 2534207..2534442 + 236 Protein_2413 IS3 family transposase -
E3159_RS12435 () 2535177..2535302 + 126 Protein_2414 outer membrane protein OmpW -
E3159_RS12440 () 2535348..2536478 - 1131 WP_001500821.1 hypothetical protein ; Integrase Integrase
E3159_RS12445 () 2536456..2536704 - 249 WP_000113189.1 excisionase -
E3159_RS12450 () 2536769..2539213 - 2445 WP_000102181.1 exonuclease -
E3159_RS12455 () 2539306..2539494 - 189 WP_000092782.1 DUF1482 family protein -
E3159_RS12460 () 2539491..2539679 - 189 WP_000450222.1 cell division inhibitor -
E3159_RS12465 () 2540167..2540319 - 153 WP_000380314.1 DUF1391 family protein -
E3159_RS12470 () 2540489..2540878 - 390 WP_000367559.1 helix-turn-helix domain-containing protein -
E3159_RS12475 () 2540981..2541256 + 276 WP_024213789.1 helix-turn-helix domain-containing protein -
E3159_RS12480 () 2541240..2541665 + 426 WP_000693888.1 Rha family transcriptional regulator -
E3159_RS12485 () 2541688..2542641 + 954 WP_000095667.1 helix-turn-helix domain-containing protein -
E3159_RS12490 () 2542648..2543388 + 741 WP_000790456.1 ATP-binding protein -
E3159_RS12495 () 2543418..2544188 + 771 WP_000450888.1 DUF1627 domain-containing protein -
E3159_RS12500 () 2544204..2544599 + 396 WP_001118161.1 DUF977 family protein -
E3159_RS12505 () 2544656..2545012 + 357 WP_001302146.1 hypothetical protein -
E3159_RS12510 () 2545061..2545273 + 213 WP_000063625.1 hypothetical protein -
E3159_RS12515 () 2545309..2545680 + 372 WP_000137941.1 hypothetical protein -
E3159_RS12520 () 2545677..2546039 + 363 WP_000610379.1 DUF551 domain-containing protein -
E3159_RS12525 () 2546155..2546259 + 105 WP_001278450.1 hypothetical protein -
E3159_RS12530 () 2546448..2546660 + 213 WP_000967408.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
E3159_RS12535 () 2546957..2547124 + 168 WP_000998188.1 hypothetical protein -
E3159_RS12540 () 2547190..2547468 + 279 WP_001304183.1 hypothetical protein -
E3159_RS12545 () 2547470..2548519 + 1050 Protein_2436 DUF968 domain-containing protein -
E3159_RS12550 () 2548532..2548906 + 375 WP_000904137.1 RusA family crossover junction endodeoxyribonuclease -
E3159_RS12555 () 2548903..2549724 + 822 WP_000762904.1 antitermination protein -
E3159_RS12560 () 2549951..2550148 + 198 WP_000917735.1 hypothetical protein -
E3159_RS12565 () 2550299..2551357 + 1059 WP_000483497.1 site-specific DNA-methyltransferase -
E3159_RS12570 () 2551849..2553699 + 1851 WP_171878292.1 DUF1737 domain-containing protein -
E3159_RS12575 () 2554138..2554353 + 216 WP_024164617.1 class II holin family protein -
E3159_RS12580 () 2554353..2554850 + 498 WP_000075112.1 lysozyme RrrD -
E3159_RS12585 () 2555067..2555252 + 186 WP_001208680.1 Rz1 family lipoprotein -
E3159_RS12590 () 2555780..2556094 + 315 WP_001303878.1 PerC family transcriptional regulator -
E3159_RS12595 () 2556176..2556400 - 225 WP_000074669.1 YlcI/YnfO family protein -
E3159_RS12600 () 2556442..2556807 + 366 WP_001303046.1 HNH endonuclease -
E3159_RS12605 () 2557096..2557659 + 564 WP_000958387.1 terminase small subunit -
E3159_RS12610 () 2557656..2559317 + 1662 WP_001301491.1 terminase large subunit -
E3159_RS12615 () 2559381..2561318 + 1938 WP_000172999.1 phage major capsid protein -
E3159_RS12620 () 2561363..2561584 + 222 WP_001063099.1 hypothetical protein -
E3159_RS12625 () 2561530..2564031 + 2502 WP_000267292.1 phage portal protein -
E3159_RS12630 () 2564111..2564437 + 327 WP_000126019.1 head-tail connector protein -
E3159_RS12635 () 2564447..2564797 + 351 WP_001007901.1 phage head closure protein -
E3159_RS12640 () 2564794..2565240 + 447 WP_000573374.1 HK97 gp10 family phage protein -
E3159_RS12645 () 2565237..2565581 + 345 WP_000133388.1 DUF3168 domain-containing protein -
E3159_RS12650 () 2565640..2566356 + 717 WP_001275508.1 tail protein -
E3159_RS12655 () 2566362..2566736 + 375 WP_001030063.1 phage tail assembly chaperone -
E3159_RS12660 () 2566832..2567041 + 210 WP_001453698.1 DUF4035 domain-containing protein -
E3159_RS12665 () 2567094..2570336 + 3243 WP_064261924.1 phage tail tape measure protein -
E3159_RS12670 () 2570329..2570670 + 342 WP_000807954.1 phage tail protein -
E3159_RS12675 () 2570670..2571107 + 438 WP_001152128.1 phage minor tail protein L -
E3159_RS12685 () 2572608..2575868 + 3261 WP_012779365.1 host specificity protein J -
E3159_RS12690 () 2575871..2576086 + 216 WP_001304111.1 hypothetical protein -
E3159_RS12695 () 2576154..2576753 + 600 WP_001230508.1 hypothetical protein VF
E3159_RS12700 () 2576818..2578041 + 1224 WP_000268860.1 prophage tail fiber N-terminal domain-containing protein -
E3159_RS12705 () 2578043..2578312 + 270 WP_001023362.1 phage tail fiber C-terminal domain-containing protein -
E3159_RS12710 () 2578426..2579001 + 576 WP_001131642.1 hypothetical protein VF
E3159_RS12715 () 2579711..2580361 + 651 WP_001121225.1 hypothetical protein VF
E3159_RS12720 () 2580511..2580906 + 396 Protein_2471 IS256 family transposase ISEic2 Transposase
E3159_RS12725 () 2580944..2582482 - 1539 WP_000998048.1 IS66 family transposase ISEc8 Transposase
E3159_RS12730 () 2582532..2582879 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
E3159_RS12735 () 2582876..2583256 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
E3159_RS12740 () 2583351..2584169 + 819 Protein_2475 IS256 family transposase IS1414 Transposase
E3159_RS12745 () 2584219..2584461 - 243 WP_001120551.1 DinI-like family protein -
E3159_RS12750 () 2584639..2585190 - 552 Protein_2477 hypothetical protein ; Integrase Integrase
E3159_RS12755 () 2585172..2586416 - 1245 WP_000102123.1 exonuclease -
E3159_RS12760 () 2586509..2586697 - 189 WP_000199475.1 DUF1482 family protein -
E3159_RS12765 () 2586694..2586882 - 189 WP_000449175.1 cell division inhibitor -
E3159_RS12770 () 2587447..2587656 + 210 WP_001133037.1 hypothetical protein -
E3159_RS12775 () 2587657..2588295 - 639 WP_000394548.1 hypothetical protein -
E3159_RS12780 () 2588307..2588459 - 153 WP_000380316.1 DUF1391 family protein -
E3159_RS12785 () 2588752..2589090 - 339 WP_001416688.1 peptidase S24 -
E3159_RS12790 () 2589482..2589724 + 243 WP_000747948.1 hypothetical protein -
E3159_RS12795 () 2589708..2590133 + 426 WP_000693878.1 Rha family transcriptional regulator -
E3159_RS12800 () 2590202..2591245 + 1044 WP_128484576.1 phage replisome organizer -
E3159_RS12805 () 2591238..2591699 + 462 WP_000139447.1 replication protein -
E3159_RS12810 () 2591733..2592449 + 717 WP_000450627.1 DUF1627 domain-containing protein -
E3159_RS12815 () 2592482..2592763 + 282 WP_000603384.1 DNA-binding protein -
E3159_RS12820 () 2592760..2592987 + 228 WP_000699809.1 hypothetical protein -
E3159_RS12825 () 2592980..2593291 + 312 WP_001289673.1 hypothetical protein -
E3159_RS12830 () 2593419..2593637 + 219 WP_000683609.1 DUF4014 family protein -
E3159_RS12835 () 2593639..2594196 + 558 WP_000104474.1 DUF551 domain-containing protein -
- () 2594417..2594475 - 59 - - Antitoxin Detail
E3159_RS12840 () 2594430..2594642 + 213 WP_000935259.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
E3159_RS12845 () 2594762..2595106 + 345 WP_000756596.1 YgiW/YdeI family stress tolerance OB fold protein -
E3159_RS12850 () 2595228..2595500 + 273 WP_000191872.1 hypothetical protein -
E3159_RS12855 () 2595502..2596551 + 1050 WP_001265229.1 DUF968 domain-containing protein -
E3159_RS12860 () 2596564..2596869 + 306 WP_001217444.1 RusA family crossover junction endodeoxyribonuclease -
E3159_RS12865 () 2596932..2597486 + 555 WP_000640035.1 DUF1133 family protein -
E3159_RS12870 () 2597711..2597908 + 198 WP_000917763.1 hypothetical protein -
E3159_RS12875 () 2598044..2598757 + 714 WP_000301797.1 helix-turn-helix domain-containing protein -
E3159_RS12890 () 2599208..2599639 + 432 WP_001302123.1 tellurite resistance protein -
E3159_RS12895 () 2599636..2599891 + 256 Protein_2504 DUF3927 family protein -
E3159_RS12900 () 2600117..2601967 + 1851 WP_128484575.1 SASA family carbohydrate esterase -
E3159_RS12905 () 2602407..2602622 + 216 WP_024180155.1 class II holin family protein -
E3159_RS12910 () 2602627..2602971 + 345 WP_000731259.1 YdfR family protein -
E3159_RS12915 () 2603022..2603555 + 534 WP_000992137.1 lysozyme -
E3159_RS12920 () 2603826..2604395 + 570 WP_001056806.1 hypothetical protein -
E3159_RS12925 () 2604395..2604541 + 147 WP_000539795.1 hypothetical protein -
E3159_RS12930 () 2604764..2604949 + 186 WP_001208680.1 Rz1 family lipoprotein -
E3159_RS12935 () 2605475..2605789 + 315 WP_001302717.1 PerC family transcriptional regulator -
E3159_RS12940 () 2605871..2606095 - 225 WP_001303940.1 YlcI/YnfO family protein -
E3159_RS12945 () 2606482..2607027 + 546 WP_000867498.1 terminase small subunit -
E3159_RS12950 () 2607002..2608927 + 1926 WP_001027230.1 phage terminase large subunit family protein -
E3159_RS12955 () 2608924..2609130 + 207 WP_000198153.1 gpW family protein -
E3159_RS12960 () 2609127..2610728 + 1602 WP_001301524.1 phage portal protein -
E3159_RS12965 () 2610709..2612028 + 1320 WP_000123254.1 S49 family peptidase -
E3159_RS12970 () 2612038..2612370 + 333 WP_001295978.1 head decoration protein -
E3159_RS12975 () 2612426..2613451 + 1026 WP_000063265.1 major capsid protein -
E3159_RS12980 () 2613493..2613891 + 399 WP_000158906.1 DNA-packaging protein FI -
E3159_RS12985 () 2613903..2614256 + 354 WP_000753016.1 head-tail joining protein -
E3159_RS12990 () 2614271..2614804 + 534 WP_000975020.1 phage tail protein -
E3159_RS12995 () 2614801..2615196 + 396 WP_000683063.1 phage minor tail U family protein -
E3159_RS13000 () 2615204..2615956 + 753 WP_000235090.1 Ig domain-containing protein -
E3159_RS13005 () 2615970..2616392 + 423 WP_000479046.1 phage minor tail protein G -
E3159_RS13010 () 2616419..2616832 + 414 WP_000533440.1 phage tail assembly protein T -
E3159_RS13015 () 2616813..2619425 + 2613 WP_000081804.1 phage tail tape measure protein -
E3159_RS13020 () 2619422..2619751 + 330 WP_000847298.1 phage tail protein -
E3159_RS13025 () 2619751..2620449 + 699 WP_001151105.1 phage minor tail protein L -
E3159_RS13030 () 2620460..2621203 + 744 WP_000194801.1 C40 family peptidase -
E3159_RS13035 () 2621149..2621778 + 630 WP_071601640.1 tail assembly protein -
E3159_RS13040 () 2622019..2625498 + 3480 WP_024748476.1 host specificity protein J -
E3159_RS13045 () 2625566..2626165 + 600 WP_001230508.1 hypothetical protein VF
E3159_RS13050 () 2626230..2627543 + 1314 WP_024748460.1 ISNCY family transposase KIS Transposase
E3159_RS13055 () 2627545..2627814 + 270 WP_001023407.1 phage tail fiber C-terminal domain-containing protein -
E3159_RS13060 () 2627928..2628503 + 576 WP_001131658.1 hypothetical protein VF
E3159_RS13065 () 2628576..2629205 + 630 WP_001356599.1 hypothetical protein VF
E3159_RS13070 () 2629287..2629928 + 642 WP_001143804.1 hypothetical protein VF
E3159_RS13075 () 2630090..2630332 - 243 WP_001120551.1 DinI-like family protein -
E3159_RS13080 () 2630464..2631747 + 1284 WP_000347470.1 MHS family MFS transporter -
E3159_RS13085 () 2631836..2633296 + 1461 WP_000527769.1 mannitol dehydrogenase family protein -
E3159_RS13090 () 2633332..2633535 - 204 WP_000214712.1 putative selenium delivery protein YdfZ -
E3159_RS13095 () 2633712..2634398 - 687 WP_000215549.1 DNA-binding transcriptional regulator YdfH -
E3159_RS13100 () 2634487..2635233 - 747 WP_000636568.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
E3159_RS13105 () 2635370..2637415 + 2046 WP_001302117.1 peptidyl-dipeptidase Dcp -
E3159_RS13110 () 2637460..2637978 - 519 WP_001024796.1 2-oxo-tetronate isomerase -
E3159_RS13115 () 2638254..2638646 + 393 WP_000671724.1 YdeI family stress tolerance OB fold protein -
E3159_RS13120 () 2638901..2639791 + 891 WP_000592852.1 diguanylate cyclase DgcZ -
E3159_RS13125 () 2640010..2640105 - 96 WP_000901365.1 protein MgtS -
E3159_RS13130 () 2640213..2641184 - 972 WP_001310251.1 transcriptional regulator FtrA -
E3159_RS13135 () 2641279..2641674 + 396 WP_001271101.1 rhodanese -
E3159_RS13140 () 2641715..2642902 - 1188 WP_001054199.1 efflux MFS transporter YdeE -
E3159_RS13145 () 2643097..2643996 + 900 WP_000087233.1 O-acetylserine/cysteine exporter -
E3159_RS13150 () 2644027..2644245 - 219 WP_000803524.1 multiple antibiotic resistance protein MarB -
E3159_RS13155 () 2644277..2644660 - 384 WP_000091199.1 MDR efflux pump AcrAB transcriptional activator MarA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance