MGE detailed information
MGE type: Conjugative plasmid MGE length: 119161 bp
Accession: NZ_CP038338 Location: 1..119161 Organism: Escherichia coli O157:H7 strain LSU61 Replicon: plasmid pLSU61-1
Accession: NZ_CP038338 Location: 1..119161 Organism: Escherichia coli O157:H7 strain LSU61 Replicon: plasmid pLSU61-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3165_RS27430 () | 2589..3464 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E3165_RS27435 () | 3465..5432 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E3165_RS27440 () | 5432..6937 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E3165_RS27445 () | 6939..8162 | + | 1224 | WP_171877389.1 | Type II secretion system protein F | VF |
| E3165_RS27450 () | 8193..8627 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E3165_RS27455 () | 8624..9178 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E3165_RS27460 () | 9193..9540 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E3165_RS27465 () | 9537..10136 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E3165_RS27470 () | 10133..11110 | + | 978 | WP_171877390.1 | Putative type II secretion system protein K | VF |
| E3165_RS27475 () | 11149..12321 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E3165_RS27480 () | 12308..12820 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E3165_RS27485 () | 12878..13711 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E3165_RS27490 () | 13803..14204 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3165_RS27495 () | 14840..15355 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E3165_RS27500 () | 15357..18353 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E3165_RS27505 () | 18403..20523 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E3165_RS27510 () | 20527..21966 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E3165_RS27515 () | 22087..22579 | + | 493 | Protein_18 | MarR family transcriptional regulator | - |
| E3165_RS27520 () | 22710..22940 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E3165_RS27525 () | 23061..23801 | + | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| E3165_RS27530 () | 24086..25063 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E3165_RS27535 () | 25850..26791 | + | 942 | WP_000554874.1 | hypothetical protein | - |
| E3165_RS27540 () | 26950..27690 | - | 741 | WP_000933099.1 | abortive infection family protein | - |
| E3165_RS27545 () | 27726..28514 | - | 789 | WP_000708303.1 | DUF2971 domain-containing protein | - |
| E3165_RS27550 () | 28511..29131 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E3165_RS27555 () | 29128..29811 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E3165_RS27560 () | 30270..30488 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3165_RS27565 () | 30490..30795 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3165_RS27570 () | 30796..31602 | + | 807 | WP_171877391.1 | tyrosine-type recombinase/integrase | - |
| E3165_RS27575 () | 32323..33078 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| E3165_RS27580 () | 33666..34832 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E3165_RS27585 () | 34832..35803 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E3165_RS27590 () | 36584..37486 | + | 903 | WP_001414532.1 | DUF1281 domain-containing protein | - |
| E3165_RS27595 () | 37490..37795 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E3165_RS27600 () | 37872..38555 | + | 684 | WP_000085945.1 | DNA methylase | - |
| E3165_RS27605 () | 38556..38777 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E3165_RS27610 () | 38671..39225 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E3165_RS27615 () | 39271..39604 | + | 334 | Protein_38 | hypothetical protein | - |
| E3165_RS27620 () | 39920..40492 | + | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E3165_RS27625 () | 40588..40890 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E3165_RS27630 () | 40937..41359 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E3165_RS27635 () | 41356..41547 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E3165_RS27640 () | 41666..42055 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E3165_RS27645 () | 42543..42773 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E3165_RS27650 () | 42825..44186 | + | 1362 | WP_000199440.1 | DUF3560 domain-containing protein | - |
| E3165_RS27655 () | 44233..44796 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E3165_RS27660 () | 44882..45331 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| E3165_RS27665 () | 45401..45607 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E3165_RS27670 () | 45633..46085 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E3165_RS27675 () | 46142..46375 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E3165_RS27680 () | 46441..48399 | + | 1959 | WP_171877392.1 | ParB/RepB/Spo0J family partition protein | - |
| E3165_RS27685 () | 48454..48888 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E3165_RS27690 () | 48885..49604 | + | 720 | WP_001276249.1 | plasmid SOS inhibition protein A | - |
| - () | 49616..49814 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49616..49814 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49616..49814 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49616..49814 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| E3165_RS27695 () | 49879..50037 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| E3165_RS27700 () | 50275..50592 | - | 318 | WP_000820278.1 | hypothetical protein | - |
| E3165_RS27705 () | 50636..50872 | - | 237 | WP_171877393.1 | hypothetical protein | - |
| E3165_RS27710 () | 51025..51222 | + | 198 | WP_045174704.1 | hypothetical protein | - |
| E3165_RS27715 () | 51341..52162 | + | 822 | WP_001234448.1 | DUF945 domain-containing protein | - |
| E3165_RS27720 () | 52458..53048 | - | 591 | WP_168940513.1 | hypothetical protein | VF |
| E3165_RS27725 () | 53399..53782 | + | 384 | WP_001063021.1 | relaxosome protein TraM | - |
| E3165_RS27730 () | 53973..54620 | + | 648 | WP_171877394.1 | conjugal transfer transcriptional regulator TraJ | - |
| E3165_RS27735 () | 54756..54971 | + | 216 | WP_000086381.1 | conjugal transfer relaxosome protein TraY | - |
| E3165_RS27740 () | 55014..55412 | + | 399 | WP_000340281.1 | type IV conjugative transfer system pilin TraA | - |
| E3165_RS27745 () | 55427..55738 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| E3165_RS27750 () | 55760..56326 | + | 567 | WP_000399795.1 | type IV conjugative transfer system protein TraE | - |
| E3165_RS27755 () | 56337..57041 | + | 705 | WP_148713375.1 | type-F conjugative transfer system secretin TraK | - |
| E3165_RS27760 () | 57041..57241 | + | 201 | WP_000146661.1 | hypothetical protein | - |
| E3165_RS27765 () | 57262..57564 | + | 303 | Protein_68 | IS3 family transposase ISEc31 | Transposase |
| E3165_RS27770 () | 57632..58783 | + | 1152 | WP_161400316.1 | IS30 family transposase IS30D | Transposase |
| E3165_RS27775 () | 58793..59698 | + | 906 | Protein_70 | IS3 family transposase ISEc31 | Transposase |
| E3165_RS27780 () | 59705..59824 | + | 120 | Protein_71 | hypothetical protein | - |
| E3165_RS27785 () | 59778..60008 | + | 231 | WP_001398289.1 | conjugal transfer protein TrbD | - |
| E3165_RS27790 () | 60020..60271 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| E3165_RS27795 () | 60268..60783 | + | 516 | WP_000809899.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3165_RS27800 () | 60918..61139 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| E3165_RS27805 () | 61299..63926 | + | 2628 | WP_171877395.1 | type IV secretion system protein TraC | - |
| E3165_RS27810 () | 63923..64309 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| E3165_RS27815 () | 64306..64938 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| E3165_RS27820 () | 64935..65927 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| E3165_RS27825 () | 65936..66574 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3165_RS27830 () | 66571..68379 | + | 1809 | WP_000821843.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3165_RS27835 () | 68406..68663 | + | 258 | WP_000864336.1 | conjugal transfer protein TrbE | - |
| E3165_RS27840 () | 68656..69399 | + | 744 | WP_001030381.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3165_RS27845 () | 69415..69762 | + | 348 | WP_001287897.1 | conjugal transfer protein TrbA | - |
| E3165_RS27850 () | 69881..70165 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E3165_RS27855 () | 70152..70697 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3165_RS27860 () | 70627..70989 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| E3165_RS27865 () | 70986..72362 | + | 1377 | WP_000982836.1 | conjugal transfer protein TraH | - |
| E3165_RS27870 () | 72359..75181 | + | 2823 | WP_171877396.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3165_RS27875 () | 75197..75682 | + | 486 | WP_000605866.1 | hypothetical protein | - |
| E3165_RS27880 () | 75731..76462 | + | 732 | WP_000782452.1 | complement resistance protein TraT | - |
| E3165_RS27885 () | 76715..78949 | + | 2235 | WP_171877397.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3165_RS27890 () | 78958..79356 | - | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E3165_RS27895 () | 79356..79583 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E3165_RS27900 () | 79665..84935 | + | 5271 | Protein_95 | Multifunctional conjugation protein TraI | Relaxase |
| E3165_RS27905 () | 84955..85701 | + | 747 | WP_000205743.1 | conjugal transfer pilus acetylase TraX | - |
| E3165_RS27910 () | 85756..86316 | + | 561 | WP_000139383.1 | fertility inhibition protein FinO | - |
| E3165_RS27915 () | 86450..86662 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| E3165_RS27920 () | 86908..87369 | + | 462 | WP_001233860.1 | thermonuclease family protein | - |
| E3165_RS27925 () | 87415..87628 | + | 214 | Protein_100 | transcriptional regulator | - |
| E3165_RS27930 () | 87666..88256 | + | 591 | WP_000766799.1 | DUF2726 domain-containing protein | - |
| - () | 88431..88489 | - | 59 | NuclAT_1 | - | - |
| - () | 88431..88489 | - | 59 | NuclAT_1 | - | - |
| - () | 88431..88489 | - | 59 | NuclAT_1 | - | - |
| - () | 88431..88489 | - | 59 | NuclAT_1 | - | - |
| E3165_RS27935 () | 88535..88684 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | - |
| E3165_RS27940 () | 88968..89216 | + | 249 | WP_000083848.1 | replication regulatory protein RepA | - |
| E3165_RS27945 () | 89459..89533 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| E3165_RS27950 () | 89526..90383 | + | 858 | WP_000130951.1 | incFII family plasmid replication initiator RepA | - |
| E3165_RS27955 () | 91471..94455 | - | 2985 | Protein_106 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| E3165_RS27960 () | 94616..95206 | + | 591 | WP_171877398.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| E3165_RS27965 () | 95272..95728 | + | 457 | Protein_108 | IS3 family transposase | - |
| E3165_RS27970 () | 96234..96758 | + | 525 | WP_000751015.1 | Pap fimbrial major pilin protein | VF |
| E3165_RS27975 () | 96838..97410 | + | 573 | WP_171877399.1 | PAP fimbrial minor pilin protein | VF |
| E3165_RS27980 () | 97564..100071 | + | 2508 | WP_171877400.1 | Outer membrane usher protein PapC | VF |
| E3165_RS27985 () | 100140..100871 | + | 732 | WP_000916502.1 | Chaperone protein PapD | VF |
| E3165_RS27990 () | 100907..101470 | + | 564 | WP_000091805.1 | hypothetical protein | VF |
| E3165_RS27995 () | 101545..102057 | + | 513 | WP_001220140.1 | Minor fimbrial protein PrsF | VF |
| E3165_RS28000 () | 102079..103071 | + | 993 | WP_000874080.1 | hypothetical protein | - |
| E3165_RS28005 () | 103468..103871 | + | 404 | Protein_116 | helix-turn-helix transcriptional regulator | - |
| E3165_RS28010 () | 104205..105182 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E3165_RS28015 () | 106143..106543 | + | 401 | Protein_118 | IS66 family transposase ISCro1 | Transposase |
| E3165_RS28020 () | 106886..107746 | + | 861 | WP_000704535.1 | putative protein YcjY | VF |
| E3165_RS28025 () | 108123..108314 | - | 192 | Protein_120 | IS1 family transposase IS1N | Transposase |
| E3165_RS28030 () | 108344..108598 | - | 255 | Protein_121 | IS3 family transposase ISEc16 | Transposase |
| E3165_RS28035 () | 108683..109610 | + | 928 | Protein_122 | IS21 family transposase IS100kyp | Transposase |
| E3165_RS28040 () | 109610..110389 | + | 780 | WP_001358883.1 | IS21 family transposase IS100kyp | Transposase |
| E3165_RS28045 () | 110457..111278 | - | 822 | Protein_124 | IS3 family transposase ISEc16 | Transposase |
| E3165_RS28050 () | 111343..111836 | - | 494 | Protein_125 | IS1 family transposase IS1N | Transposase |
| E3165_RS28055 () | 113277..114098 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E3165_RS28060 () | 114098..115204 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E3165_RS28065 () | 115294..117015 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E3165_RS28070 () | 117089..118087 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E3165_RS28075 () | 118140..118328 | + | 189 | Protein_130 | hypothetical protein | - |
| E3165_RS28080 () | 118432..118518 | - | 87 | Protein_131 | IS3 family transposase ISEhe3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|